CNRS Nantes University US2B US2B
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***  HYDROLASE 19-MAY-97 1AKI  ***

CA strain for 2403061344231916285

---  normal mode 100  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0122
VAL 2PHE 3 0.2927
PHE 3GLY 4 0.1574
GLY 4ARG 5 0.7877
ARG 5CYS 6 0.0080
CYS 6GLU 7 -0.0108
GLU 7LEU 8 -0.2756
LEU 8ALA 9 -0.1546
ALA 9ALA 10 -0.5414
ALA 10ALA 11 0.0253
ALA 11MET 12 -0.3890
MET 12LYS 13 -0.4333
LYS 13ARG 14 0.6110
ARG 14HIS 15 -0.3485
HIS 15GLY 16 0.2222
GLY 16LEU 17 0.5704
LEU 17ASP 18 -0.6145
ASP 18ASN 19 -0.0865
ASN 19TYR 20 -0.1513
TYR 20ARG 21 -0.1001
ARG 21GLY 22 0.7833
GLY 22TYR 23 0.3264
TYR 23SER 24 -0.2733
SER 24LEU 25 0.5345
LEU 25GLY 26 -0.1323
GLY 26ASN 27 0.0973
ASN 27TRP 28 0.0345
TRP 28VAL 29 0.4822
VAL 29CYS 30 -0.1366
CYS 30ALA 31 0.1218
ALA 31ALA 32 0.0025
ALA 32LYS 33 -0.1127
LYS 33PHE 34 0.1708
PHE 34GLU 35 0.4188
GLU 35SER 36 -0.3358
SER 36ASN 37 0.2567
ASN 37PHE 38 -0.1895
PHE 38ASN 39 -0.0945
ASN 39THR 40 0.2542
THR 40GLN 41 -0.4217
GLN 41ALA 42 -0.3260
ALA 42THR 43 0.2709
THR 43ASN 44 0.2801
ASN 44ARG 45 0.5910
ARG 45ASN 46 -0.3771
ASN 46THR 47 -0.0779
THR 47ASP 48 -0.2932
ASP 48GLY 49 0.4264
GLY 49SER 50 0.5137
SER 50THR 51 -0.6063
THR 51ASP 52 0.2790
ASP 52TYR 53 0.5363
TYR 53GLY 54 0.0198
GLY 54ILE 55 0.3185
ILE 55LEU 56 0.1415
LEU 56GLN 57 -0.1639
GLN 57ILE 58 -0.3736
ILE 58ASN 59 0.1980
ASN 59SER 60 0.3013
SER 60ARG 61 -0.8724
ARG 61TRP 62 0.1178
TRP 62TRP 63 -0.2707
TRP 63CYS 64 -0.4328
CYS 64ASN 65 0.2478
ASN 65ASP 66 0.2318
ASP 66GLY 67 -0.0567
GLY 67ARG 68 -0.0690
ARG 68THR 69 -0.4293
THR 69PRO 70 0.3021
PRO 70GLY 71 -0.4571
GLY 71SER 72 -0.5824
SER 72ARG 73 0.0541
ARG 73ASN 74 -0.5524
ASN 74LEU 75 0.0270
LEU 75CYS 76 0.0652
CYS 76ASN 77 0.7105
ASN 77ILE 78 -0.0413
ILE 78PRO 79 -0.2224
PRO 79CYS 80 -0.1481
CYS 80SER 81 -0.2201
SER 81ALA 82 0.6942
ALA 82LEU 83 -0.3704
LEU 83LEU 84 0.7692
LEU 84SER 85 -0.3200
SER 85SER 86 -0.0892
SER 86ASP 87 -0.3657
ASP 87ILE 88 -0.2309
ILE 88THR 89 -0.2827
THR 89ALA 90 0.7398
ALA 90SER 91 -0.9201
SER 91VAL 92 0.5028
VAL 92ASN 93 -0.4344
ASN 93CYS 94 0.3778
CYS 94ALA 95 -0.2228
ALA 95LYS 96 0.1384
LYS 96LYS 97 -0.2177
LYS 97ILE 98 0.1636
ILE 98VAL 99 0.3248
VAL 99SER 100 0.0054
SER 100ASP 101 -0.5518
ASP 101GLY 102 -0.1407
GLY 102ASN 103 -0.6416
ASN 103GLY 104 -0.1895
GLY 104MET 105 -0.3336
MET 105ASN 106 -0.5059
ASN 106ALA 107 0.4012
ALA 107TRP 108 -0.0259
TRP 108VAL 109 -0.4029
VAL 109ALA 110 0.4609
ALA 110TRP 111 0.3293
TRP 111ARG 112 -0.3606
ARG 112ASN 113 -0.7442
ASN 113ARG 114 0.4858
ARG 114CYS 115 -0.6854
CYS 115LYS 116 -0.7439
LYS 116GLY 117 0.1517
GLY 117THR 118 -0.0616
THR 118ASP 119 -0.4072
ASP 119VAL 120 1.1555
VAL 120GLN 121 -0.4132
GLN 121ALA 122 -0.3023
ALA 122TRP 123 0.3408
TRP 123ILE 124 -0.2457
ILE 124ARG 125 0.3862
ARG 125GLY 126 -0.0783
GLY 126CYS 127 -0.6738
CYS 127ARG 128 1.3362
ARG 128LEU 129 0.3520

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.