This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0122
VAL 2
PHE 3
0.2927
PHE 3
GLY 4
0.1574
GLY 4
ARG 5
0.7877
ARG 5
CYS 6
0.0080
CYS 6
GLU 7
-0.0108
GLU 7
LEU 8
-0.2756
LEU 8
ALA 9
-0.1546
ALA 9
ALA 10
-0.5414
ALA 10
ALA 11
0.0253
ALA 11
MET 12
-0.3890
MET 12
LYS 13
-0.4333
LYS 13
ARG 14
0.6110
ARG 14
HIS 15
-0.3485
HIS 15
GLY 16
0.2222
GLY 16
LEU 17
0.5704
LEU 17
ASP 18
-0.6145
ASP 18
ASN 19
-0.0865
ASN 19
TYR 20
-0.1513
TYR 20
ARG 21
-0.1001
ARG 21
GLY 22
0.7833
GLY 22
TYR 23
0.3264
TYR 23
SER 24
-0.2733
SER 24
LEU 25
0.5345
LEU 25
GLY 26
-0.1323
GLY 26
ASN 27
0.0973
ASN 27
TRP 28
0.0345
TRP 28
VAL 29
0.4822
VAL 29
CYS 30
-0.1366
CYS 30
ALA 31
0.1218
ALA 31
ALA 32
0.0025
ALA 32
LYS 33
-0.1127
LYS 33
PHE 34
0.1708
PHE 34
GLU 35
0.4188
GLU 35
SER 36
-0.3358
SER 36
ASN 37
0.2567
ASN 37
PHE 38
-0.1895
PHE 38
ASN 39
-0.0945
ASN 39
THR 40
0.2542
THR 40
GLN 41
-0.4217
GLN 41
ALA 42
-0.3260
ALA 42
THR 43
0.2709
THR 43
ASN 44
0.2801
ASN 44
ARG 45
0.5910
ARG 45
ASN 46
-0.3771
ASN 46
THR 47
-0.0779
THR 47
ASP 48
-0.2932
ASP 48
GLY 49
0.4264
GLY 49
SER 50
0.5137
SER 50
THR 51
-0.6063
THR 51
ASP 52
0.2790
ASP 52
TYR 53
0.5363
TYR 53
GLY 54
0.0198
GLY 54
ILE 55
0.3185
ILE 55
LEU 56
0.1415
LEU 56
GLN 57
-0.1639
GLN 57
ILE 58
-0.3736
ILE 58
ASN 59
0.1980
ASN 59
SER 60
0.3013
SER 60
ARG 61
-0.8724
ARG 61
TRP 62
0.1178
TRP 62
TRP 63
-0.2707
TRP 63
CYS 64
-0.4328
CYS 64
ASN 65
0.2478
ASN 65
ASP 66
0.2318
ASP 66
GLY 67
-0.0567
GLY 67
ARG 68
-0.0690
ARG 68
THR 69
-0.4293
THR 69
PRO 70
0.3021
PRO 70
GLY 71
-0.4571
GLY 71
SER 72
-0.5824
SER 72
ARG 73
0.0541
ARG 73
ASN 74
-0.5524
ASN 74
LEU 75
0.0270
LEU 75
CYS 76
0.0652
CYS 76
ASN 77
0.7105
ASN 77
ILE 78
-0.0413
ILE 78
PRO 79
-0.2224
PRO 79
CYS 80
-0.1481
CYS 80
SER 81
-0.2201
SER 81
ALA 82
0.6942
ALA 82
LEU 83
-0.3704
LEU 83
LEU 84
0.7692
LEU 84
SER 85
-0.3200
SER 85
SER 86
-0.0892
SER 86
ASP 87
-0.3657
ASP 87
ILE 88
-0.2309
ILE 88
THR 89
-0.2827
THR 89
ALA 90
0.7398
ALA 90
SER 91
-0.9201
SER 91
VAL 92
0.5028
VAL 92
ASN 93
-0.4344
ASN 93
CYS 94
0.3778
CYS 94
ALA 95
-0.2228
ALA 95
LYS 96
0.1384
LYS 96
LYS 97
-0.2177
LYS 97
ILE 98
0.1636
ILE 98
VAL 99
0.3248
VAL 99
SER 100
0.0054
SER 100
ASP 101
-0.5518
ASP 101
GLY 102
-0.1407
GLY 102
ASN 103
-0.6416
ASN 103
GLY 104
-0.1895
GLY 104
MET 105
-0.3336
MET 105
ASN 106
-0.5059
ASN 106
ALA 107
0.4012
ALA 107
TRP 108
-0.0259
TRP 108
VAL 109
-0.4029
VAL 109
ALA 110
0.4609
ALA 110
TRP 111
0.3293
TRP 111
ARG 112
-0.3606
ARG 112
ASN 113
-0.7442
ASN 113
ARG 114
0.4858
ARG 114
CYS 115
-0.6854
CYS 115
LYS 116
-0.7439
LYS 116
GLY 117
0.1517
GLY 117
THR 118
-0.0616
THR 118
ASP 119
-0.4072
ASP 119
VAL 120
1.1555
VAL 120
GLN 121
-0.4132
GLN 121
ALA 122
-0.3023
ALA 122
TRP 123
0.3408
TRP 123
ILE 124
-0.2457
ILE 124
ARG 125
0.3862
ARG 125
GLY 126
-0.0783
GLY 126
CYS 127
-0.6738
CYS 127
ARG 128
1.3362
ARG 128
LEU 129
0.3520
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.