CNRS Nantes University US2B US2B
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***  HYDROLASE 19-MAY-97 1AKI  ***

CA strain for 2403061344231916285

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.1244
VAL 2PHE 3 -0.1186
PHE 3GLY 4 0.0011
GLY 4ARG 5 0.0611
ARG 5CYS 6 -0.2788
CYS 6GLU 7 -0.0460
GLU 7LEU 8 -0.0302
LEU 8ALA 9 -0.0773
ALA 9ALA 10 0.0183
ALA 10ALA 11 -0.0471
ALA 11MET 12 -0.0605
MET 12LYS 13 0.0507
LYS 13ARG 14 0.0007
ARG 14HIS 15 0.1242
HIS 15GLY 16 -0.2079
GLY 16LEU 17 -0.0183
LEU 17ASP 18 0.0608
ASP 18ASN 19 -0.0224
ASN 19TYR 20 0.1157
TYR 20ARG 21 -0.0356
ARG 21GLY 22 0.0650
GLY 22TYR 23 0.0228
TYR 23SER 24 0.0161
SER 24LEU 25 -0.0189
LEU 25GLY 26 0.0146
GLY 26ASN 27 0.0017
ASN 27TRP 28 -0.0134
TRP 28VAL 29 -0.0224
VAL 29CYS 30 -0.0051
CYS 30ALA 31 -0.0385
ALA 31ALA 32 0.0599
ALA 32LYS 33 -0.0369
LYS 33PHE 34 0.0086
PHE 34GLU 35 -0.1165
GLU 35SER 36 0.2753
SER 36ASN 37 -0.1780
ASN 37PHE 38 -0.0072
PHE 38ASN 39 -0.1020
ASN 39THR 40 0.1947
THR 40GLN 41 -0.1160
GLN 41ALA 42 -0.0280
ALA 42THR 43 -0.3784
THR 43ASN 44 -0.3381
ASN 44ARG 45 -0.0933
ARG 45ASN 46 -0.0586
ASN 46THR 47 0.0188
THR 47ASP 48 0.0603
ASP 48GLY 49 0.0624
GLY 49SER 50 0.0436
SER 50THR 51 -0.1339
THR 51ASP 52 0.0104
ASP 52TYR 53 0.0036
TYR 53GLY 54 -0.1200
GLY 54ILE 55 -0.1250
ILE 55LEU 56 0.0382
LEU 56GLN 57 0.0516
GLN 57ILE 58 -0.2595
ILE 58ASN 59 0.0108
ASN 59SER 60 -0.0042
SER 60ARG 61 -0.1191
ARG 61TRP 62 0.1856
TRP 62TRP 63 0.0626
TRP 63CYS 64 0.0110
CYS 64ASN 65 -0.0365
ASN 65ASP 66 -0.0937
ASP 66GLY 67 0.0545
GLY 67ARG 68 -0.0504
ARG 68THR 69 0.0598
THR 69PRO 70 -0.0037
PRO 70GLY 71 0.0155
GLY 71SER 72 0.0690
SER 72ARG 73 -0.0222
ARG 73ASN 74 0.1259
ASN 74LEU 75 -0.0961
LEU 75CYS 76 0.1587
CYS 76ASN 77 -0.0287
ASN 77ILE 78 0.1251
ILE 78PRO 79 -0.1278
PRO 79CYS 80 -0.0519
CYS 80SER 81 0.0241
SER 81ALA 82 -0.1549
ALA 82LEU 83 0.0452
LEU 83LEU 84 0.0544
LEU 84SER 85 -0.2275
SER 85SER 86 0.2284
SER 86ASP 87 -0.0381
ASP 87ILE 88 -0.0081
ILE 88THR 89 0.0581
THR 89ALA 90 0.1205
ALA 90SER 91 0.0236
SER 91VAL 92 -0.0247
VAL 92ASN 93 0.1229
ASN 93CYS 94 0.2213
CYS 94ALA 95 -0.0088
ALA 95LYS 96 0.0225
LYS 96LYS 97 0.2244
LYS 97ILE 98 -0.2979
ILE 98VAL 99 0.1479
VAL 99SER 100 -0.0134
SER 100ASP 101 0.1653
ASP 101GLY 102 0.0560
GLY 102ASN 103 0.0151
ASN 103GLY 104 -0.0327
GLY 104MET 105 -0.0174
MET 105ASN 106 -0.0079
ASN 106ALA 107 -0.1368
ALA 107TRP 108 -0.0369
TRP 108VAL 109 -0.1418
VAL 109ALA 110 -0.0058
ALA 110TRP 111 0.0388
TRP 111ARG 112 0.0386
ARG 112ASN 113 -0.0616
ASN 113ARG 114 -0.0129
ARG 114CYS 115 0.0081
CYS 115LYS 116 0.0294
LYS 116GLY 117 -0.0201
GLY 117THR 118 0.0001
THR 118ASP 119 -0.0270
ASP 119VAL 120 -0.0015
VAL 120GLN 121 -0.0063
GLN 121ALA 122 0.0053
ALA 122TRP 123 -0.0028
TRP 123ILE 124 -0.0117
ILE 124ARG 125 0.0236
ARG 125GLY 126 -0.0011
GLY 126CYS 127 -0.0253
CYS 127ARG 128 -0.0613
ARG 128LEU 129 0.0744

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.