This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
VAL 31
TYR 32
0.0005
TYR 32
SER 60
-0.0000
SER 60
GLN 78
-0.0002
GLN 78
PRO 110
0.0000
PRO 110
GLU 111
-0.0001
GLU 111
VAL 112
-0.0007
VAL 112
ARG 118
0.6074
ARG 118
ARG 133
-0.0003
ARG 133
GLY 137
0.0455
GLY 137
ASP 138
-0.0001
ASP 138
SER 141
-0.0002
SER 141
GLY 142
-0.0001
GLY 142
THR 143
-0.0004
THR 143
GLU 144
0.0000
GLU 144
ARG 166
0.0001
ARG 166
VAL 167
0.0000
VAL 167
SER 168
-0.0001
SER 168
ALA 169
0.0000
ALA 169
ASP 182
0.8868
ASP 182
PHE 185
0.1051
PHE 185
TYR 186
0.0001
TYR 186
THR 187
0.0002
THR 187
VAL 188
-0.0002
VAL 188
GLU 258
-0.0352
GLU 258
GLU 259
0.0000
GLU 259
ARG 305
0.0000
ARG 305
GLU 309
0.0000
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.