This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
GLU 2
0.4312
GLU 2
GLY 3
-0.1211
GLY 3
TYR 4
0.0875
TYR 4
LEU 5
0.0502
LEU 5
VAL 6
-0.0166
VAL 6
ASP 7
0.0111
ASP 7
TYR 8
-0.3028
TYR 8
HIS 9
0.1890
HIS 9
THR 10
-0.2769
THR 10
GLY 11
0.0858
GLY 11
CYS 12
-0.0397
CYS 12
LYS 13
-0.1597
LYS 13
TYR 14
0.2452
TYR 14
THR 15
-0.4303
THR 15
CYS 16
-0.1175
CYS 16
ALA 17
-0.1560
ALA 17
LYS 18
0.0279
LYS 18
LEU 19
0.1363
LEU 19
GLY 20
0.0439
GLY 20
ASP 21
-0.2160
ASP 21
ASN 22
-0.0775
ASN 22
ASP 23
-0.0683
ASP 23
TYR 24
0.1103
TYR 24
CYS 25
0.0634
CYS 25
VAL 26
-0.0203
VAL 26
ARG 27
0.0230
ARG 27
GLU 28
0.1081
GLU 28
CYS 29
-0.0269
CYS 29
ARG 30
0.1063
ARG 30
LEU 31
0.1066
LEU 31
ARG 32
0.0858
ARG 32
TYR 33
-0.0470
TYR 33
TYR 34
0.3863
TYR 34
GLN 35
0.1848
GLN 35
SER 36
-0.0680
SER 36
ALA 37
0.0165
ALA 37
HIS 38
-0.0744
HIS 38
GLY 39
0.0118
GLY 39
TYR 40
-0.0412
TYR 40
CYS 41
0.0955
CYS 41
TYR 42
-0.1235
TYR 42
ALA 43
0.0084
ALA 43
PHE 44
-0.0319
PHE 44
ALA 45
-0.0348
ALA 45
CYS 46
0.0369
CYS 46
TRP 47
0.0504
TRP 47
CYS 48
0.0698
CYS 48
THR 49
-0.0620
THR 49
HIS 50
0.0498
HIS 50
LEU 51
0.1171
LEU 51
TYR 52
0.0760
TYR 52
GLU 53
-0.1536
GLU 53
GLN 54
0.0364
GLN 54
ALA 55
-0.1437
ALA 55
VAL 56
0.1010
VAL 56
VAL 57
0.1650
VAL 57
ARG 58
0.1215
ARG 58
PRO 59
0.0657
PRO 59
LEU 60
0.0894
LEU 60
PRO 61
-0.0039
PRO 61
ASN 62
-0.0120
ASN 62
LYS 63
0.0780
LYS 63
ARG 64
0.2149
ARG 64
CYS 65
-0.0363
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.