This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
GLU 2
0.6367
GLU 2
GLY 3
0.0143
GLY 3
TYR 4
0.2714
TYR 4
LEU 5
0.0346
LEU 5
VAL 6
-0.0912
VAL 6
ASP 7
-0.1004
ASP 7
TYR 8
0.3975
TYR 8
HIS 9
-0.3020
HIS 9
THR 10
0.4482
THR 10
GLY 11
0.0711
GLY 11
CYS 12
0.0053
CYS 12
LYS 13
0.1582
LYS 13
TYR 14
-0.1687
TYR 14
THR 15
0.0136
THR 15
CYS 16
-0.0053
CYS 16
ALA 17
-0.0410
ALA 17
LYS 18
0.0779
LYS 18
LEU 19
0.1712
LEU 19
GLY 20
0.0024
GLY 20
ASP 21
-0.1549
ASP 21
ASN 22
-0.0427
ASN 22
ASP 23
-0.0845
ASP 23
TYR 24
0.1191
TYR 24
CYS 25
0.1041
CYS 25
VAL 26
-0.0837
VAL 26
ARG 27
0.0762
ARG 27
GLU 28
-0.0208
GLU 28
CYS 29
0.0355
CYS 29
ARG 30
-0.0480
ARG 30
LEU 31
0.2013
LEU 31
ARG 32
-0.2149
ARG 32
TYR 33
-0.5274
TYR 33
TYR 34
0.2369
TYR 34
GLN 35
-0.0574
GLN 35
SER 36
0.0808
SER 36
ALA 37
0.0004
ALA 37
HIS 38
-0.0632
HIS 38
GLY 39
-0.0046
GLY 39
TYR 40
-0.0752
TYR 40
CYS 41
0.0605
CYS 41
TYR 42
-0.1553
TYR 42
ALA 43
-0.0223
ALA 43
PHE 44
-0.1519
PHE 44
ALA 45
0.2170
ALA 45
CYS 46
-0.0311
CYS 46
TRP 47
0.0711
TRP 47
CYS 48
0.1158
CYS 48
THR 49
-0.0957
THR 49
HIS 50
0.1449
HIS 50
LEU 51
-0.0018
LEU 51
TYR 52
0.1061
TYR 52
GLU 53
-0.1645
GLU 53
GLN 54
-0.1013
GLN 54
ALA 55
-0.0773
ALA 55
VAL 56
-0.1470
VAL 56
VAL 57
-0.0019
VAL 57
ARG 58
-0.0033
ARG 58
PRO 59
0.1657
PRO 59
LEU 60
0.0545
LEU 60
PRO 61
0.0162
PRO 61
ASN 62
0.0683
ASN 62
LYS 63
0.0137
LYS 63
ARG 64
-0.3013
ARG 64
CYS 65
-0.0704
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.