CNRS Nantes University US2B US2B
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***  Cll13  ***

CA strain for 2403151705163353962

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1GLU 2 0.0188
GLU 2GLY 3 0.1192
GLY 3TYR 4 0.0616
TYR 4LEU 5 -0.0104
LEU 5VAL 6 0.0065
VAL 6ASP 7 -0.0522
ASP 7TYR 8 0.1948
TYR 8HIS 9 -0.1804
HIS 9THR 10 -0.0702
THR 10GLY 11 0.1284
GLY 11CYS 12 -0.0344
CYS 12LYS 13 -0.0725
LYS 13TYR 14 -0.3267
TYR 14THR 15 0.2338
THR 15CYS 16 -0.1122
CYS 16ALA 17 0.0130
ALA 17LYS 18 -0.0189
LYS 18LEU 19 -0.0299
LEU 19GLY 20 -0.0007
GLY 20ASP 21 0.0253
ASP 21ASN 22 -0.0041
ASN 22ASP 23 0.0157
ASP 23TYR 24 -0.0861
TYR 24CYS 25 0.0010
CYS 25VAL 26 -0.0431
VAL 26ARG 27 0.0217
ARG 27GLU 28 -0.0744
GLU 28CYS 29 -0.0073
CYS 29ARG 30 -0.0562
ARG 30LEU 31 -0.0035
LEU 31ARG 32 0.0251
ARG 32TYR 33 -0.1843
TYR 33TYR 34 0.0702
TYR 34GLN 35 -0.0206
GLN 35SER 36 0.0049
SER 36ALA 37 -0.0009
ALA 37HIS 38 -0.0038
HIS 38GLY 39 -0.0146
GLY 39TYR 40 0.0006
TYR 40CYS 41 -0.0148
CYS 41TYR 42 0.0266
TYR 42ALA 43 -0.0094
ALA 43PHE 44 0.0565
PHE 44ALA 45 -0.0519
ALA 45CYS 46 -0.0327
CYS 46TRP 47 -0.0113
TRP 47CYS 48 -0.0143
CYS 48THR 49 -0.0012
THR 49HIS 50 0.0032
HIS 50LEU 51 0.0173
LEU 51TYR 52 -0.0254
TYR 52GLU 53 -0.0150
GLU 53GLN 54 -0.0323
GLN 54ALA 55 0.0112
ALA 55VAL 56 0.1865
VAL 56VAL 57 -0.1994
VAL 57ARG 58 0.2805
ARG 58PRO 59 0.0595
PRO 59LEU 60 -0.2362
LEU 60PRO 61 -0.0534
PRO 61ASN 62 -0.0032
ASN 62LYS 63 -0.1202
LYS 63ARG 64 0.1468
ARG 64CYS 65 0.0686

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.