This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
GLU 2
0.0188
GLU 2
GLY 3
0.1192
GLY 3
TYR 4
0.0616
TYR 4
LEU 5
-0.0104
LEU 5
VAL 6
0.0065
VAL 6
ASP 7
-0.0522
ASP 7
TYR 8
0.1948
TYR 8
HIS 9
-0.1804
HIS 9
THR 10
-0.0702
THR 10
GLY 11
0.1284
GLY 11
CYS 12
-0.0344
CYS 12
LYS 13
-0.0725
LYS 13
TYR 14
-0.3267
TYR 14
THR 15
0.2338
THR 15
CYS 16
-0.1122
CYS 16
ALA 17
0.0130
ALA 17
LYS 18
-0.0189
LYS 18
LEU 19
-0.0299
LEU 19
GLY 20
-0.0007
GLY 20
ASP 21
0.0253
ASP 21
ASN 22
-0.0041
ASN 22
ASP 23
0.0157
ASP 23
TYR 24
-0.0861
TYR 24
CYS 25
0.0010
CYS 25
VAL 26
-0.0431
VAL 26
ARG 27
0.0217
ARG 27
GLU 28
-0.0744
GLU 28
CYS 29
-0.0073
CYS 29
ARG 30
-0.0562
ARG 30
LEU 31
-0.0035
LEU 31
ARG 32
0.0251
ARG 32
TYR 33
-0.1843
TYR 33
TYR 34
0.0702
TYR 34
GLN 35
-0.0206
GLN 35
SER 36
0.0049
SER 36
ALA 37
-0.0009
ALA 37
HIS 38
-0.0038
HIS 38
GLY 39
-0.0146
GLY 39
TYR 40
0.0006
TYR 40
CYS 41
-0.0148
CYS 41
TYR 42
0.0266
TYR 42
ALA 43
-0.0094
ALA 43
PHE 44
0.0565
PHE 44
ALA 45
-0.0519
ALA 45
CYS 46
-0.0327
CYS 46
TRP 47
-0.0113
TRP 47
CYS 48
-0.0143
CYS 48
THR 49
-0.0012
THR 49
HIS 50
0.0032
HIS 50
LEU 51
0.0173
LEU 51
TYR 52
-0.0254
TYR 52
GLU 53
-0.0150
GLU 53
GLN 54
-0.0323
GLN 54
ALA 55
0.0112
ALA 55
VAL 56
0.1865
VAL 56
VAL 57
-0.1994
VAL 57
ARG 58
0.2805
ARG 58
PRO 59
0.0595
PRO 59
LEU 60
-0.2362
LEU 60
PRO 61
-0.0534
PRO 61
ASN 62
-0.0032
ASN 62
LYS 63
-0.1202
LYS 63
ARG 64
0.1468
ARG 64
CYS 65
0.0686
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.