This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
GLU 2
-0.1309
GLU 2
GLY 3
0.1310
GLY 3
TYR 4
0.0466
TYR 4
LEU 5
-0.0673
LEU 5
VAL 6
-0.0430
VAL 6
ASP 7
0.0048
ASP 7
TYR 8
0.2763
TYR 8
HIS 9
-0.2162
HIS 9
THR 10
-0.0350
THR 10
GLY 11
0.0522
GLY 11
CYS 12
0.2015
CYS 12
LYS 13
0.4155
LYS 13
TYR 14
0.0123
TYR 14
THR 15
0.2300
THR 15
CYS 16
0.2157
CYS 16
ALA 17
0.1000
ALA 17
LYS 18
0.0131
LYS 18
LEU 19
-0.0075
LEU 19
GLY 20
-0.0725
GLY 20
ASP 21
0.0919
ASP 21
ASN 22
0.0319
ASN 22
ASP 23
0.0212
ASP 23
TYR 24
0.0178
TYR 24
CYS 25
-0.0243
CYS 25
VAL 26
0.0720
VAL 26
ARG 27
-0.0340
ARG 27
GLU 28
-0.0387
GLU 28
CYS 29
0.0458
CYS 29
ARG 30
0.0093
ARG 30
LEU 31
-0.0522
LEU 31
ARG 32
-0.2527
ARG 32
TYR 33
-0.0519
TYR 33
TYR 34
-0.2242
TYR 34
GLN 35
-0.1369
GLN 35
SER 36
0.0634
SER 36
ALA 37
-0.0075
ALA 37
HIS 38
-0.0134
HIS 38
GLY 39
0.0040
GLY 39
TYR 40
-0.0403
TYR 40
CYS 41
-0.0902
CYS 41
TYR 42
0.0434
TYR 42
ALA 43
-0.0907
ALA 43
PHE 44
-0.0871
PHE 44
ALA 45
0.1831
ALA 45
CYS 46
0.0205
CYS 46
TRP 47
-0.0707
TRP 47
CYS 48
-0.0326
CYS 48
THR 49
0.0512
THR 49
HIS 50
0.0082
HIS 50
LEU 51
-0.1084
LEU 51
TYR 52
0.0057
TYR 52
GLU 53
0.1109
GLU 53
GLN 54
-0.0717
GLN 54
ALA 55
0.1420
ALA 55
VAL 56
-0.4610
VAL 56
VAL 57
0.1203
VAL 57
ARG 58
-0.0295
ARG 58
PRO 59
0.0984
PRO 59
LEU 60
0.1213
LEU 60
PRO 61
0.0467
PRO 61
ASN 62
0.0040
ASN 62
LYS 63
0.2226
LYS 63
ARG 64
-0.0553
ARG 64
CYS 65
-0.0747
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.