CNRS Nantes University US2B US2B
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***  Cll13  ***

CA strain for 2403151705163353962

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1GLU 2 -0.1309
GLU 2GLY 3 0.1310
GLY 3TYR 4 0.0466
TYR 4LEU 5 -0.0673
LEU 5VAL 6 -0.0430
VAL 6ASP 7 0.0048
ASP 7TYR 8 0.2763
TYR 8HIS 9 -0.2162
HIS 9THR 10 -0.0350
THR 10GLY 11 0.0522
GLY 11CYS 12 0.2015
CYS 12LYS 13 0.4155
LYS 13TYR 14 0.0123
TYR 14THR 15 0.2300
THR 15CYS 16 0.2157
CYS 16ALA 17 0.1000
ALA 17LYS 18 0.0131
LYS 18LEU 19 -0.0075
LEU 19GLY 20 -0.0725
GLY 20ASP 21 0.0919
ASP 21ASN 22 0.0319
ASN 22ASP 23 0.0212
ASP 23TYR 24 0.0178
TYR 24CYS 25 -0.0243
CYS 25VAL 26 0.0720
VAL 26ARG 27 -0.0340
ARG 27GLU 28 -0.0387
GLU 28CYS 29 0.0458
CYS 29ARG 30 0.0093
ARG 30LEU 31 -0.0522
LEU 31ARG 32 -0.2527
ARG 32TYR 33 -0.0519
TYR 33TYR 34 -0.2242
TYR 34GLN 35 -0.1369
GLN 35SER 36 0.0634
SER 36ALA 37 -0.0075
ALA 37HIS 38 -0.0134
HIS 38GLY 39 0.0040
GLY 39TYR 40 -0.0403
TYR 40CYS 41 -0.0902
CYS 41TYR 42 0.0434
TYR 42ALA 43 -0.0907
ALA 43PHE 44 -0.0871
PHE 44ALA 45 0.1831
ALA 45CYS 46 0.0205
CYS 46TRP 47 -0.0707
TRP 47CYS 48 -0.0326
CYS 48THR 49 0.0512
THR 49HIS 50 0.0082
HIS 50LEU 51 -0.1084
LEU 51TYR 52 0.0057
TYR 52GLU 53 0.1109
GLU 53GLN 54 -0.0717
GLN 54ALA 55 0.1420
ALA 55VAL 56 -0.4610
VAL 56VAL 57 0.1203
VAL 57ARG 58 -0.0295
ARG 58PRO 59 0.0984
PRO 59LEU 60 0.1213
LEU 60PRO 61 0.0467
PRO 61ASN 62 0.0040
ASN 62LYS 63 0.2226
LYS 63ARG 64 -0.0553
ARG 64CYS 65 -0.0747

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.