This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
GLU 2
0.2731
GLU 2
GLY 3
-0.0960
GLY 3
TYR 4
0.2487
TYR 4
LEU 5
0.0205
LEU 5
VAL 6
0.1057
VAL 6
ASP 7
-0.0878
ASP 7
TYR 8
0.1151
TYR 8
HIS 9
-0.1081
HIS 9
THR 10
-0.2132
THR 10
GLY 11
-0.1559
GLY 11
CYS 12
0.1697
CYS 12
LYS 13
0.2444
LYS 13
TYR 14
0.0846
TYR 14
THR 15
0.1259
THR 15
CYS 16
0.2521
CYS 16
ALA 17
0.1515
ALA 17
LYS 18
0.0513
LYS 18
LEU 19
-0.0539
LEU 19
GLY 20
0.0214
GLY 20
ASP 21
0.0032
ASP 21
ASN 22
0.1305
ASN 22
ASP 23
-0.0782
ASP 23
TYR 24
0.1916
TYR 24
CYS 25
-0.0207
CYS 25
VAL 26
-0.0158
VAL 26
ARG 27
0.0294
ARG 27
GLU 28
0.1798
GLU 28
CYS 29
-0.0644
CYS 29
ARG 30
0.0099
ARG 30
LEU 31
0.0771
LEU 31
ARG 32
0.1710
ARG 32
TYR 33
0.0297
TYR 33
TYR 34
0.0982
TYR 34
GLN 35
0.0682
GLN 35
SER 36
0.0028
SER 36
ALA 37
0.0222
ALA 37
HIS 38
0.0483
HIS 38
GLY 39
0.0018
GLY 39
TYR 40
0.0112
TYR 40
CYS 41
0.0200
CYS 41
TYR 42
-0.0802
TYR 42
ALA 43
0.0974
ALA 43
PHE 44
0.0044
PHE 44
ALA 45
0.0886
ALA 45
CYS 46
-0.0881
CYS 46
TRP 47
0.1362
TRP 47
CYS 48
0.0945
CYS 48
THR 49
0.0275
THR 49
HIS 50
0.0734
HIS 50
LEU 51
-0.0639
LEU 51
TYR 52
0.0554
TYR 52
GLU 53
-0.0454
GLU 53
GLN 54
-0.0701
GLN 54
ALA 55
-0.0095
ALA 55
VAL 56
-0.3403
VAL 56
VAL 57
0.1316
VAL 57
ARG 58
0.0844
ARG 58
PRO 59
-0.1651
PRO 59
LEU 60
-0.0410
LEU 60
PRO 61
0.0653
PRO 61
ASN 62
-0.0750
ASN 62
LYS 63
0.0753
LYS 63
ARG 64
0.0046
ARG 64
CYS 65
-0.0086
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.