CNRS Nantes University US2B US2B
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***  Cll13  ***

CA strain for 2403151705163353962

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1GLU 2 0.2731
GLU 2GLY 3 -0.0960
GLY 3TYR 4 0.2487
TYR 4LEU 5 0.0205
LEU 5VAL 6 0.1057
VAL 6ASP 7 -0.0878
ASP 7TYR 8 0.1151
TYR 8HIS 9 -0.1081
HIS 9THR 10 -0.2132
THR 10GLY 11 -0.1559
GLY 11CYS 12 0.1697
CYS 12LYS 13 0.2444
LYS 13TYR 14 0.0846
TYR 14THR 15 0.1259
THR 15CYS 16 0.2521
CYS 16ALA 17 0.1515
ALA 17LYS 18 0.0513
LYS 18LEU 19 -0.0539
LEU 19GLY 20 0.0214
GLY 20ASP 21 0.0032
ASP 21ASN 22 0.1305
ASN 22ASP 23 -0.0782
ASP 23TYR 24 0.1916
TYR 24CYS 25 -0.0207
CYS 25VAL 26 -0.0158
VAL 26ARG 27 0.0294
ARG 27GLU 28 0.1798
GLU 28CYS 29 -0.0644
CYS 29ARG 30 0.0099
ARG 30LEU 31 0.0771
LEU 31ARG 32 0.1710
ARG 32TYR 33 0.0297
TYR 33TYR 34 0.0982
TYR 34GLN 35 0.0682
GLN 35SER 36 0.0028
SER 36ALA 37 0.0222
ALA 37HIS 38 0.0483
HIS 38GLY 39 0.0018
GLY 39TYR 40 0.0112
TYR 40CYS 41 0.0200
CYS 41TYR 42 -0.0802
TYR 42ALA 43 0.0974
ALA 43PHE 44 0.0044
PHE 44ALA 45 0.0886
ALA 45CYS 46 -0.0881
CYS 46TRP 47 0.1362
TRP 47CYS 48 0.0945
CYS 48THR 49 0.0275
THR 49HIS 50 0.0734
HIS 50LEU 51 -0.0639
LEU 51TYR 52 0.0554
TYR 52GLU 53 -0.0454
GLU 53GLN 54 -0.0701
GLN 54ALA 55 -0.0095
ALA 55VAL 56 -0.3403
VAL 56VAL 57 0.1316
VAL 57ARG 58 0.0844
ARG 58PRO 59 -0.1651
PRO 59LEU 60 -0.0410
LEU 60PRO 61 0.0653
PRO 61ASN 62 -0.0750
ASN 62LYS 63 0.0753
LYS 63ARG 64 0.0046
ARG 64CYS 65 -0.0086

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.