This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLY 2
0.0099
GLY 2
PRO 3
0.0164
PRO 3
LYS 4
0.0206
LYS 4
ARG 5
-0.0215
ARG 5
ARG 6
-0.0034
ARG 6
GLN 7
0.0146
GLN 7
LEU 8
0.0325
LEU 8
THR 9
-0.0563
THR 9
PHE 10
0.0348
PHE 10
ARG 11
0.0210
ARG 11
GLU 12
-0.0606
GLU 12
LYS 13
0.0131
LYS 13
SER 14
0.0137
SER 14
ARG 15
-0.0143
ARG 15
ILE 16
-0.0507
ILE 16
ILE 17
0.0218
ILE 17
GLN 18
0.0317
GLN 18
GLU 19
-0.0149
GLU 19
VAL 20
0.0009
VAL 20
GLU 21
0.0149
GLU 21
GLU 22
-0.0076
GLU 22
ASN 23
-0.0049
ASN 23
PRO 24
0.0129
PRO 24
ASP 25
-0.0129
ASP 25
LEU 26
0.0273
LEU 26
ARG 27
-0.0621
ARG 27
LYS 28
0.0059
LYS 28
GLY 29
0.0074
GLY 29
GLU 30
0.0037
GLU 30
ILE 31
-0.0257
ILE 31
ALA 32
0.0452
ALA 32
ARG 33
-0.0145
ARG 33
ARG 34
0.0018
ARG 34
PHE 35
-0.0043
PHE 35
ASN 36
-0.0171
ASN 36
ILE 37
-0.0001
ILE 37
PRO 38
-0.0382
PRO 38
PRO 39
0.0463
PRO 39
SER 40
0.0346
SER 40
THR 41
-0.0347
THR 41
LEU 42
0.0562
LEU 42
SER 43
-0.0160
SER 43
THR 44
-0.0097
THR 44
ILE 45
-0.0341
ILE 45
LEU 46
0.0065
LEU 46
LYS 47
0.0419
LYS 47
ASN 48
-0.0728
ASN 48
LYS 49
0.0393
LYS 49
ARG 50
-0.0154
ARG 50
ALA 51
-0.0136
ALA 51
ILE 52
0.0500
ILE 52
LEU 53
0.0021
LEU 53
ALA 54
-0.0599
ALA 54
SER 55
0.0327
SER 55
GLU 56
0.0190
GLU 56
ARG 57
0.0165
ARG 57
LYS 58
-0.0729
LYS 58
TYR 59
0.0507
TYR 59
GLY 60
0.0836
GLY 60
VAL 61
0.0682
VAL 61
ALA 62
0.0218
ALA 62
SER 63
-0.1604
SER 63
THR 64
0.0551
THR 64
CYS 65
0.0228
CYS 65
ARG 66
-0.0031
ARG 66
LYS 67
-0.0524
LYS 67
THR 68
0.0212
THR 68
ASN 69
0.0198
ASN 69
LYS 70
0.0112
LYS 70
LEU 71
0.0372
LEU 71
SER 72
0.0512
SER 72
PRO 73
0.0230
PRO 73
TYR 74
0.0807
TYR 74
ASP 75
-0.0138
ASP 75
LYS 76
0.0211
LYS 76
LEU 77
0.0072
LEU 77
GLU 78
-0.0101
GLU 78
GLY 79
-0.0073
GLY 79
LEU 80
0.0102
LEU 80
LEU 81
0.0203
LEU 81
ILE 82
-0.0365
ILE 82
ALA 83
0.0107
ALA 83
TRP 84
0.0509
TRP 84
PHE 85
-0.0561
PHE 85
GLN 86
0.0326
GLN 86
GLN 87
-0.0235
GLN 87
ILE 88
0.0264
ILE 88
ARG 89
-0.0249
ARG 89
ALA 90
-0.0180
ALA 90
ALA 91
-0.0139
ALA 91
GLY 92
0.0025
GLY 92
LEU 93
0.0363
LEU 93
PRO 94
0.0385
PRO 94
VAL 95
0.0198
VAL 95
LYS 96
0.0459
LYS 96
GLY 97
-0.0046
GLY 97
ILE 98
-0.0317
ILE 98
ILE 99
0.0085
ILE 99
LEU 100
-0.0673
LEU 100
LYS 101
0.0587
LYS 101
GLU 102
-0.0350
GLU 102
LYS 103
-0.0013
LYS 103
ALA 104
0.0280
ALA 104
LEU 105
-0.0239
LEU 105
ARG 106
0.0151
ARG 106
ILE 107
0.0028
ILE 107
ALA 108
-0.0131
ALA 108
GLU 109
0.0073
GLU 109
GLU 110
0.0063
GLU 110
LEU 111
0.0049
LEU 111
GLY 112
0.0016
GLY 112
MET 113
0.0267
MET 113
ASP 114
0.0390
ASP 114
ASP 115
0.0143
ASP 115
PHE 116
-0.0137
PHE 116
THR 117
-0.0344
THR 117
ALA 118
-0.0132
ALA 118
SER 119
0.0580
SER 119
ASN 120
-0.0335
ASN 120
GLY 121
0.0178
GLY 121
TRP 122
-0.0040
TRP 122
LEU 123
0.0604
LEU 123
ASP 124
0.0053
ASP 124
ARG 125
-0.0386
ARG 125
PHE 126
0.0323
PHE 126
ARG 127
-0.0002
ARG 127
ARG 128
-0.1686
ARG 128
ARG 129
-0.0295
ARG 129
ARG 130
-0.1295
ARG 130
SER 131
0.0445
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.