This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLY 2
0.1118
GLY 2
PRO 3
0.1861
PRO 3
LYS 4
-0.1045
LYS 4
ARG 5
0.0314
ARG 5
ARG 6
0.0315
ARG 6
GLN 7
-0.0268
GLN 7
LEU 8
0.0230
LEU 8
THR 9
-0.0243
THR 9
PHE 10
0.0031
PHE 10
ARG 11
-0.0209
ARG 11
GLU 12
-0.0306
GLU 12
LYS 13
0.0146
LYS 13
SER 14
0.0104
SER 14
ARG 15
-0.0593
ARG 15
ILE 16
0.0001
ILE 16
ILE 17
-0.0076
ILE 17
GLN 18
-0.0167
GLN 18
GLU 19
-0.0252
GLU 19
VAL 20
0.0132
VAL 20
GLU 21
0.0041
GLU 21
GLU 22
0.0003
GLU 22
ASN 23
0.0123
ASN 23
PRO 24
-0.0042
PRO 24
ASP 25
-0.0053
ASP 25
LEU 26
0.0170
LEU 26
ARG 27
0.0983
ARG 27
LYS 28
0.0448
LYS 28
GLY 29
-0.1237
GLY 29
GLU 30
0.0555
GLU 30
ILE 31
-0.0602
ILE 31
ALA 32
0.0566
ALA 32
ARG 33
0.0592
ARG 33
ARG 34
0.0159
ARG 34
PHE 35
-0.0411
PHE 35
ASN 36
0.0391
ASN 36
ILE 37
0.0147
ILE 37
PRO 38
0.0632
PRO 38
PRO 39
-0.1280
PRO 39
SER 40
0.0618
SER 40
THR 41
-0.0200
THR 41
LEU 42
0.0111
LEU 42
SER 43
0.0272
SER 43
THR 44
0.1077
THR 44
ILE 45
0.0028
ILE 45
LEU 46
0.0272
LEU 46
LYS 47
-0.1040
LYS 47
ASN 48
0.1405
ASN 48
LYS 49
-0.0437
LYS 49
ARG 50
0.0136
ARG 50
ALA 51
-0.0067
ALA 51
ILE 52
-0.0520
ILE 52
LEU 53
0.0007
LEU 53
ALA 54
-0.0245
ALA 54
SER 55
-0.0044
SER 55
GLU 56
-0.0274
GLU 56
ARG 57
-0.0139
ARG 57
LYS 58
-0.0411
LYS 58
TYR 59
0.0233
TYR 59
GLY 60
-0.0149
GLY 60
VAL 61
0.0296
VAL 61
ALA 62
-0.0031
ALA 62
SER 63
0.0184
SER 63
THR 64
0.0063
THR 64
CYS 65
-0.0079
CYS 65
ARG 66
-0.0187
ARG 66
LYS 67
0.0137
LYS 67
THR 68
-0.0218
THR 68
ASN 69
-0.0353
ASN 69
LYS 70
0.0220
LYS 70
LEU 71
-0.1063
LEU 71
SER 72
-0.0863
SER 72
PRO 73
0.0096
PRO 73
TYR 74
-0.0603
TYR 74
ASP 75
-0.0473
ASP 75
LYS 76
-0.0860
LYS 76
LEU 77
-0.0088
LEU 77
GLU 78
0.0092
GLU 78
GLY 79
-0.0082
GLY 79
LEU 80
-0.0112
LEU 80
LEU 81
0.0139
LEU 81
ILE 82
0.0005
ILE 82
ALA 83
-0.0152
ALA 83
TRP 84
0.0124
TRP 84
PHE 85
-0.0064
PHE 85
GLN 86
0.0115
GLN 86
GLN 87
-0.0213
GLN 87
ILE 88
-0.0018
ILE 88
ARG 89
0.0067
ARG 89
ALA 90
-0.0098
ALA 90
ALA 91
-0.0085
ALA 91
GLY 92
-0.0006
GLY 92
LEU 93
0.0078
LEU 93
PRO 94
0.0079
PRO 94
VAL 95
0.0060
VAL 95
LYS 96
0.0073
LYS 96
GLY 97
0.0119
GLY 97
ILE 98
0.0177
ILE 98
ILE 99
-0.0185
ILE 99
LEU 100
-0.0082
LEU 100
LYS 101
0.0190
LYS 101
GLU 102
0.0118
GLU 102
LYS 103
-0.0011
LYS 103
ALA 104
0.0111
ALA 104
LEU 105
-0.0027
LEU 105
ARG 106
0.0211
ARG 106
ILE 107
-0.0258
ILE 107
ALA 108
0.0266
ALA 108
GLU 109
-0.0071
GLU 109
GLU 110
0.0059
GLU 110
LEU 111
-0.0135
LEU 111
GLY 112
-0.0062
GLY 112
MET 113
-0.0172
MET 113
ASP 114
-0.0158
ASP 114
ASP 115
0.0068
ASP 115
PHE 116
0.0077
PHE 116
THR 117
-0.0324
THR 117
ALA 118
0.0071
ALA 118
SER 119
0.0392
SER 119
ASN 120
-0.0734
ASN 120
GLY 121
0.0112
GLY 121
TRP 122
-0.0071
TRP 122
LEU 123
-0.0033
LEU 123
ASP 124
-0.0069
ASP 124
ARG 125
0.0668
ARG 125
PHE 126
-0.0162
PHE 126
ARG 127
0.0072
ARG 127
ARG 128
0.0377
ARG 128
ARG 129
0.0385
ARG 129
ARG 130
-0.0363
ARG 130
SER 131
-0.0242
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.