This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLY 2
0.0209
GLY 2
PRO 3
0.1287
PRO 3
LYS 4
0.0938
LYS 4
ARG 5
0.0545
ARG 5
ARG 6
0.0087
ARG 6
GLN 7
0.0280
GLN 7
LEU 8
0.0098
LEU 8
THR 9
-0.0100
THR 9
PHE 10
-0.0047
PHE 10
ARG 11
-0.0078
ARG 11
GLU 12
-0.0037
GLU 12
LYS 13
-0.0013
LYS 13
SER 14
0.0025
SER 14
ARG 15
-0.0169
ARG 15
ILE 16
-0.0018
ILE 16
ILE 17
-0.0045
ILE 17
GLN 18
-0.0018
GLN 18
GLU 19
-0.0071
GLU 19
VAL 20
0.0001
VAL 20
GLU 21
0.0033
GLU 21
GLU 22
-0.0099
GLU 22
ASN 23
-0.0010
ASN 23
PRO 24
0.0046
PRO 24
ASP 25
-0.0056
ASP 25
LEU 26
0.0041
LEU 26
ARG 27
-0.0135
ARG 27
LYS 28
-0.0015
LYS 28
GLY 29
0.0019
GLY 29
GLU 30
-0.0049
GLU 30
ILE 31
0.0012
ILE 31
ALA 32
0.0051
ALA 32
ARG 33
-0.0097
ARG 33
ARG 34
-0.0027
ARG 34
PHE 35
0.0118
PHE 35
ASN 36
-0.0127
ASN 36
ILE 37
-0.0014
ILE 37
PRO 38
-0.0157
PRO 38
PRO 39
0.0285
PRO 39
SER 40
-0.0080
SER 40
THR 41
0.0020
THR 41
LEU 42
0.0110
LEU 42
SER 43
-0.0040
SER 43
THR 44
-0.0134
THR 44
ILE 45
0.0044
ILE 45
LEU 46
-0.0019
LEU 46
LYS 47
0.0028
LYS 47
ASN 48
-0.0064
ASN 48
LYS 49
-0.0108
LYS 49
ARG 50
0.0015
ARG 50
ALA 51
-0.0265
ALA 51
ILE 52
0.0067
ILE 52
LEU 53
-0.0033
LEU 53
ALA 54
-0.0219
ALA 54
SER 55
-0.0004
SER 55
GLU 56
-0.0135
GLU 56
ARG 57
-0.0036
ARG 57
LYS 58
-0.0119
LYS 58
TYR 59
-0.0013
TYR 59
GLY 60
-0.0097
GLY 60
VAL 61
-0.0054
VAL 61
ALA 62
0.0068
ALA 62
SER 63
0.0145
SER 63
THR 64
-0.0053
THR 64
CYS 65
0.0113
CYS 65
ARG 66
0.0098
ARG 66
LYS 67
-0.0097
LYS 67
THR 68
-0.0038
THR 68
ASN 69
-0.0146
ASN 69
LYS 70
-0.0272
LYS 70
LEU 71
-0.0202
LEU 71
SER 72
-0.0287
SER 72
PRO 73
-0.0070
PRO 73
TYR 74
0.0043
TYR 74
ASP 75
-0.0241
ASP 75
LYS 76
-0.0180
LYS 76
LEU 77
-0.0045
LEU 77
GLU 78
-0.0053
GLU 78
GLY 79
-0.0009
GLY 79
LEU 80
0.0000
LEU 80
LEU 81
-0.0022
LEU 81
ILE 82
-0.0049
ILE 82
ALA 83
-0.0067
ALA 83
TRP 84
-0.0057
TRP 84
PHE 85
0.0015
PHE 85
GLN 86
-0.0003
GLN 86
GLN 87
-0.0070
GLN 87
ILE 88
-0.0025
ILE 88
ARG 89
0.0005
ARG 89
ALA 90
-0.0038
ALA 90
ALA 91
-0.0006
ALA 91
GLY 92
-0.0004
GLY 92
LEU 93
-0.0013
LEU 93
PRO 94
-0.0015
PRO 94
VAL 95
-0.0000
VAL 95
LYS 96
-0.0048
LYS 96
GLY 97
-0.0020
GLY 97
ILE 98
0.0040
ILE 98
ILE 99
-0.0050
ILE 99
LEU 100
0.0018
LEU 100
LYS 101
-0.0007
LYS 101
GLU 102
0.0033
GLU 102
LYS 103
-0.0001
LYS 103
ALA 104
0.0025
ALA 104
LEU 105
-0.0003
LEU 105
ARG 106
0.0047
ARG 106
ILE 107
-0.0052
ILE 107
ALA 108
0.0054
ALA 108
GLU 109
-0.0010
GLU 109
GLU 110
0.0015
GLU 110
LEU 111
-0.0040
LEU 111
GLY 112
-0.0039
GLY 112
MET 113
-0.0018
MET 113
ASP 114
-0.0099
ASP 114
ASP 115
0.0057
ASP 115
PHE 116
-0.0003
PHE 116
THR 117
-0.0051
THR 117
ALA 118
0.0025
ALA 118
SER 119
0.0029
SER 119
ASN 120
-0.0049
ASN 120
GLY 121
-0.0010
GLY 121
TRP 122
0.0001
TRP 122
LEU 123
-0.0033
LEU 123
ASP 124
-0.0003
ASP 124
ARG 125
0.0058
ARG 125
PHE 126
-0.0091
PHE 126
ARG 127
0.0022
ARG 127
ARG 128
0.0166
ARG 128
ARG 129
0.0148
ARG 129
ARG 130
-0.0079
ARG 130
SER 131
-0.0086
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.