CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

CA strain for 2403301821521607471

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 112PRO 113 0.0033
PRO 113LEU 114 -0.0037
LEU 114ILE 115 0.0068
ILE 115VAL 116 0.0240
VAL 116PRO 117 -0.0491
PRO 117TYR 118 0.0120
TYR 118ASN 119 -0.0383
ASN 119LEU 120 -0.0149
LEU 120PRO 121 -0.0003
PRO 121LEU 122 -0.0123
LEU 122PRO 123 -0.0108
PRO 123GLY 124 0.0177
GLY 124GLY 125 -0.0036
GLY 125VAL 126 -0.0029
VAL 126VAL 127 -0.0390
VAL 127PRO 128 -0.0084
PRO 128ARG 129 0.0041
ARG 129MET 130 -0.0011
MET 130LEU 131 0.0479
LEU 131ILE 132 0.0070
ILE 132THR 133 0.0257
THR 133ILE 134 0.0322
ILE 134LEU 135 0.0010
LEU 135GLY 136 0.0340
GLY 136THR 137 0.0300
THR 137VAL 138 0.0090
VAL 138LYS 139 0.0137
LYS 139PRO 140 -0.0089
PRO 140ASN 141 0.0062
ASN 141ALA 142 -0.0136
ALA 142ASN 143 0.0022
ASN 143ASN 143 -0.0170
ASN 143ARG 144 -0.0143
ARG 144ILE 145 -0.0096
ILE 145ALA 146 -0.0676
ALA 146LEU 147 -0.0250
LEU 147ASP 148 -0.0519
ASP 148PHE 149 -0.0415
PHE 149GLN 150 -0.0061
GLN 150ARG 151 -0.0440
ARG 151GLY 152 -0.0090
GLY 152ASN 153 0.0614
ASN 153ASP 154 0.0066
ASP 154VAL 155 -0.0345
VAL 155ALA 156 -0.0057
ALA 156PHE 157 0.0011
PHE 157HIS 158 -0.0510
HIS 158PHE 159 -0.0522
PHE 159ASN 160 -0.0088
ASN 160PRO 161 -0.0443
PRO 161ARG 162 -0.0008
ARG 162PHE 163 -0.0492
PHE 163ASN 164 0.0277
ASN 164GLU 165 -0.0282
GLU 165ASN 166 -0.0210
ASN 166ASN 166 0.0051
ASN 166ASN 167 -0.0057
ASN 167ARG 168 -0.0021
ARG 168ARG 169 0.0322
ARG 169VAL 170 -0.0217
VAL 170ILE 171 -0.0060
ILE 171VAL 172 -0.0310
VAL 172CYS 173 -0.0452
CYS 173ASN 174 -0.0097
ASN 174THR 175 -0.0185
THR 175LYS 176 0.0211
LYS 176LEU 177 -0.0363
LEU 177ASP 178 0.0533
ASP 178ASN 179 -0.0266
ASN 179ASN 180 0.0181
ASN 180TRP 181 -0.0517
TRP 181GLY 182 0.0351
GLY 182ARG 183 0.0464
ARG 183GLU 184 -0.0123
GLU 184GLU 185 -0.0249
GLU 185ARG 186 -0.0107
ARG 186GLN 187 -0.0037
GLN 187SER 188 0.0020
SER 188VAL 189 0.0083
VAL 189PHE 190 0.0119
PHE 190PRO 191 -0.0115
PRO 191PHE 192 0.0111
PHE 192GLU 193 0.0115
GLU 193GLU 193 -0.0185
GLU 193SER 194 0.0226
SER 194GLY 195 0.0075
GLY 195LYS 196 0.0215
LYS 196PRO 197 0.0130
PRO 197PHE 198 0.0120
PHE 198LYS 199 0.0682
LYS 199ILE 200 -0.0072
ILE 200GLN 201 0.0405
GLN 201VAL 202 0.0255
VAL 202LEU 203 0.0122
LEU 203VAL 204 0.0328
VAL 204GLU 205 -0.0003
GLU 205PRO 206 0.0155
PRO 206ASP 207 -0.0206
ASP 207HIS 208 0.0096
HIS 208PHE 209 0.0023
PHE 209LYS 210 0.0213
LYS 210VAL 211 0.0256
VAL 211ALA 212 0.0264
ALA 212VAL 213 0.0609
VAL 213ASN 214 -0.0059
ASN 214ASP 215 0.0170
ASP 215ALA 216 -0.0145
ALA 216HIS 217 0.0549
HIS 217LEU 218 0.0065
LEU 218LEU 219 0.0343
LEU 219GLN 220 0.0269
GLN 220TYR 221 0.0208
TYR 221ASN 222 0.0042
ASN 222ASN 222 -0.0100
ASN 222HIS 223 0.0013
HIS 223ARG 224 0.0286
ARG 224VAL 225 -0.0464
VAL 225LYS 226 0.0085
LYS 226LYS 227 -0.0087
LYS 227LEU 228 0.0465
LEU 228ASN 229 -0.0027
ASN 229GLU 230 0.0157
GLU 230ILE 231 -0.0123
ILE 231SER 232 0.0026
SER 232SER 232 -0.0177
SER 232LYS 233 -0.0248
LYS 233LEU 234 -0.0076
LEU 234GLY 235 -0.0250
GLY 235ILE 236 -0.0817
ILE 236SER 237 0.0083
SER 237GLY 238 -0.0428
GLY 238ASP 239 -0.0465
ASP 239ILE 240 0.0536
ILE 240ASP 241 0.0080
ASP 241LEU 242 -0.0000
LEU 242THR 243 -0.0082
THR 243SER 244 0.0262
SER 244SER 244 -0.0000
SER 244ALA 245 0.0005
ALA 245SER 246 0.0131
SER 246TYR 247 0.0160
TYR 247THR 248 0.0090
THR 248MET 249 0.0054
MET 249MET 249 -0.0097
MET 249ILE 250 -0.0029

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.