This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLU 2
0.0642
GLU 2
MET 3
0.0820
MET 3
ALA 4
-0.0242
ALA 4
GLU 5
-0.0250
GLU 5
VAL 6
-0.0689
VAL 6
ILE 7
0.0374
ILE 7
ARG 8
-0.0458
ARG 8
ALA 9
0.0817
ALA 9
SER 10
0.0192
SER 10
ILE 11
-0.0596
ILE 11
GLU 12
0.0514
GLU 12
HIS 13
-0.0412
HIS 13
PHE 14
0.0836
PHE 14
LEU 15
-0.1016
LEU 15
VAL 16
0.0085
VAL 16
LEU 17
0.0512
LEU 17
LYS 18
-0.0982
LYS 18
GLN 19
-0.0720
GLN 19
LEU 20
-0.0152
LEU 20
ARG 21
-0.0001
ARG 21
VAL 22
0.2393
VAL 22
ASP 23
-0.1799
ASP 23
ALA 24
0.0871
ALA 24
TYR 25
0.0389
TYR 25
PRO 26
-0.0722
PRO 26
GLU 27
-0.0076
GLU 27
LEU 28
-0.0023
LEU 28
SER 29
0.0243
SER 29
ALA 30
-0.0257
ALA 30
GLN 31
0.0372
GLN 31
CYS 32
0.0328
CYS 32
ALA 33
-0.0141
ALA 33
GLN 34
0.0298
GLN 34
LEU 35
0.0418
LEU 35
GLN 36
-0.0521
GLN 36
LYS 37
0.0404
LYS 37
ASP 38
0.0496
ASP 38
ILE 39
0.0024
ILE 39
SER 40
-0.0344
SER 40
LEU 41
0.1225
LEU 41
ALA 42
-0.0266
ALA 42
LYS 43
0.0010
LYS 43
ASP 44
-0.0484
ASP 44
THR 45
0.0478
THR 45
THR 46
-0.0633
THR 46
GLU 47
0.0101
GLU 47
ALA 48
0.0382
ALA 48
CYS 49
0.0083
CYS 49
LYS 50
-0.0204
LYS 50
LYS 51
-0.0701
LYS 51
LEU 52
0.0600
LEU 52
LEU 53
-0.0741
LEU 53
SER 54
-0.0714
SER 54
LEU 55
-0.0399
LEU 55
SER 56
0.0637
SER 56
SER 57
0.0222
SER 57
VAL 58
-0.3143
VAL 58
SER 59
0.0826
SER 59
HIS 60
-0.1031
HIS 60
SER 61
-0.0124
SER 61
MET 62
-0.2473
MET 62
SER 1
-0.2797
SER 1
GLU 2
-0.0642
GLU 2
MET 3
-0.0819
MET 3
ALA 4
0.0243
ALA 4
GLU 5
0.0245
GLU 5
VAL 6
0.0688
VAL 6
ILE 7
-0.0374
ILE 7
ARG 8
0.0452
ARG 8
ALA 9
-0.0818
ALA 9
SER 10
-0.0192
SER 10
ILE 11
0.0595
ILE 11
GLU 12
-0.0515
GLU 12
HIS 13
0.0418
HIS 13
PHE 14
-0.0837
PHE 14
LEU 15
0.1013
LEU 15
VAL 16
-0.0084
VAL 16
LEU 17
-0.0512
LEU 17
LYS 18
0.0974
LYS 18
GLN 19
0.0728
GLN 19
LEU 20
0.0149
LEU 20
ARG 21
-0.0001
ARG 21
VAL 22
-0.2398
VAL 22
ASP 23
0.1802
ASP 23
ALA 24
-0.0868
ALA 24
TYR 25
-0.0386
TYR 25
PRO 26
0.0716
PRO 26
GLU 27
0.0072
GLU 27
LEU 28
0.0019
LEU 28
SER 29
-0.0240
SER 29
ALA 30
0.0256
ALA 30
GLN 31
-0.0371
GLN 31
CYS 32
-0.0332
CYS 32
ALA 33
0.0147
ALA 33
GLN 34
-0.0305
GLN 34
LEU 35
-0.0417
LEU 35
GLN 36
0.0518
GLN 36
LYS 37
-0.0406
LYS 37
ASP 38
-0.0493
ASP 38
ILE 39
-0.0025
ILE 39
SER 40
0.0339
SER 40
LEU 41
-0.1228
LEU 41
ALA 42
0.0262
ALA 42
LYS 43
-0.0009
LYS 43
ASP 44
0.0488
ASP 44
THR 45
-0.0474
THR 45
THR 46
0.0634
THR 46
GLU 47
-0.0102
GLU 47
ALA 48
-0.0380
ALA 48
CYS 49
-0.0083
CYS 49
LYS 50
0.0205
LYS 50
LYS 51
0.0699
LYS 51
LEU 52
-0.0600
LEU 52
LEU 53
0.0741
LEU 53
SER 54
0.0713
SER 54
LEU 55
0.0395
LEU 55
SER 56
-0.0637
SER 56
SER 57
-0.0224
SER 57
VAL 58
0.3148
VAL 58
SER 59
-0.0826
SER 59
HIS 60
0.1029
HIS 60
SER 61
0.0113
SER 61
MET 62
0.2469
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.