This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLU 2
-0.0346
GLU 2
MET 3
-0.0568
MET 3
ALA 4
0.0455
ALA 4
GLU 5
-0.0816
GLU 5
VAL 6
-0.0319
VAL 6
ILE 7
-0.0620
ILE 7
ARG 8
-0.0039
ARG 8
ALA 9
-0.0868
ALA 9
SER 10
-0.0324
SER 10
ILE 11
-0.0297
ILE 11
GLU 12
-0.0752
GLU 12
HIS 13
0.0414
HIS 13
PHE 14
0.0018
PHE 14
LEU 15
-0.1150
LEU 15
VAL 16
-0.0582
VAL 16
LEU 17
0.0303
LEU 17
LYS 18
-0.0411
LYS 18
GLN 19
-0.0939
GLN 19
LEU 20
-0.0042
LEU 20
ARG 21
0.0821
ARG 21
VAL 22
-0.4073
VAL 22
ASP 23
0.0326
ASP 23
ALA 24
0.1466
ALA 24
TYR 25
-0.1011
TYR 25
PRO 26
-0.0505
PRO 26
GLU 27
-0.0957
GLU 27
LEU 28
-0.0368
LEU 28
SER 29
0.0604
SER 29
ALA 30
-0.0855
ALA 30
GLN 31
-0.1244
GLN 31
CYS 32
0.1051
CYS 32
ALA 33
0.0246
ALA 33
GLN 34
-0.2191
GLN 34
LEU 35
0.0919
LEU 35
GLN 36
0.0126
GLN 36
LYS 37
-0.1153
LYS 37
ASP 38
0.0103
ASP 38
ILE 39
-0.0295
ILE 39
SER 40
0.0759
SER 40
LEU 41
-0.0502
LEU 41
ALA 42
0.1488
ALA 42
LYS 43
-0.1245
LYS 43
ASP 44
0.1131
ASP 44
THR 45
0.0625
THR 45
THR 46
0.0268
THR 46
GLU 47
-0.0648
GLU 47
ALA 48
0.0949
ALA 48
CYS 49
0.0519
CYS 49
LYS 50
-0.0580
LYS 50
LYS 51
-0.0281
LYS 51
LEU 52
0.0879
LEU 52
LEU 53
0.0495
LEU 53
SER 54
-0.1250
SER 54
LEU 55
-0.0266
LEU 55
SER 56
0.0338
SER 56
SER 57
0.0588
SER 57
VAL 58
-0.1534
VAL 58
SER 59
0.0260
SER 59
HIS 60
-0.0032
HIS 60
SER 61
-0.0279
SER 61
MET 62
0.0434
MET 62
SER 1
-0.2064
SER 1
GLU 2
0.0337
GLU 2
MET 3
0.0572
MET 3
ALA 4
-0.0456
ALA 4
GLU 5
0.0814
GLU 5
VAL 6
0.0321
VAL 6
ILE 7
0.0624
ILE 7
ARG 8
0.0036
ARG 8
ALA 9
0.0864
ALA 9
SER 10
0.0325
SER 10
ILE 11
0.0296
ILE 11
GLU 12
0.0742
GLU 12
HIS 13
-0.0410
HIS 13
PHE 14
-0.0020
PHE 14
LEU 15
0.1151
LEU 15
VAL 16
0.0581
VAL 16
LEU 17
-0.0303
LEU 17
LYS 18
0.0408
LYS 18
GLN 19
0.0946
GLN 19
LEU 20
0.0044
LEU 20
ARG 21
-0.0824
ARG 21
VAL 22
0.4082
VAL 22
ASP 23
-0.0332
ASP 23
ALA 24
-0.1460
ALA 24
TYR 25
0.1020
TYR 25
PRO 26
0.0497
PRO 26
GLU 27
0.0947
GLU 27
LEU 28
0.0360
LEU 28
SER 29
-0.0607
SER 29
ALA 30
0.0853
ALA 30
GLN 31
0.1239
GLN 31
CYS 32
-0.1050
CYS 32
ALA 33
-0.0253
ALA 33
GLN 34
0.2188
GLN 34
LEU 35
-0.0922
LEU 35
GLN 36
-0.0131
GLN 36
LYS 37
0.1151
LYS 37
ASP 38
-0.0106
ASP 38
ILE 39
0.0299
ILE 39
SER 40
-0.0765
SER 40
LEU 41
0.0496
LEU 41
ALA 42
-0.1489
ALA 42
LYS 43
0.1242
LYS 43
ASP 44
-0.1125
ASP 44
THR 45
-0.0631
THR 45
THR 46
-0.0265
THR 46
GLU 47
0.0648
GLU 47
ALA 48
-0.0950
ALA 48
CYS 49
-0.0516
CYS 49
LYS 50
0.0581
LYS 50
LYS 51
0.0279
LYS 51
LEU 52
-0.0880
LEU 52
LEU 53
-0.0500
LEU 53
SER 54
0.1245
SER 54
LEU 55
0.0261
LEU 55
SER 56
-0.0343
SER 56
SER 57
-0.0587
SER 57
VAL 58
0.1532
VAL 58
SER 59
-0.0269
SER 59
HIS 60
0.0033
HIS 60
SER 61
0.0263
SER 61
MET 62
-0.0425
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.