This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLU 2
-0.0328
GLU 2
MET 3
-0.0079
MET 3
ALA 4
0.0238
ALA 4
GLU 5
-0.0161
GLU 5
VAL 6
-0.0292
VAL 6
ILE 7
0.0439
ILE 7
ARG 8
-0.0660
ARG 8
ALA 9
-0.1010
ALA 9
SER 10
-0.0280
SER 10
ILE 11
0.0132
ILE 11
GLU 12
-0.1131
GLU 12
HIS 13
0.0175
HIS 13
PHE 14
0.0516
PHE 14
LEU 15
-0.0569
LEU 15
VAL 16
-0.0212
VAL 16
LEU 17
0.0167
LEU 17
LYS 18
-0.0407
LYS 18
GLN 19
-0.0398
GLN 19
LEU 20
-0.0531
LEU 20
ARG 21
0.0963
ARG 21
VAL 22
-0.0488
VAL 22
ASP 23
-0.0344
ASP 23
ALA 24
0.0437
ALA 24
TYR 25
-0.0233
TYR 25
PRO 26
-0.0066
PRO 26
GLU 27
-0.0363
GLU 27
LEU 28
0.0145
LEU 28
SER 29
0.0406
SER 29
ALA 30
-0.0075
ALA 30
GLN 31
-0.0653
GLN 31
CYS 32
0.0170
CYS 32
ALA 33
0.0284
ALA 33
GLN 34
-0.0722
GLN 34
LEU 35
-0.0029
LEU 35
GLN 36
-0.0095
GLN 36
LYS 37
-0.0458
LYS 37
ASP 38
-0.0266
ASP 38
ILE 39
-0.0178
ILE 39
SER 40
-0.0049
SER 40
LEU 41
-0.0623
LEU 41
ALA 42
0.0269
ALA 42
LYS 43
0.0024
LYS 43
ASP 44
0.0533
ASP 44
THR 45
-0.0746
THR 45
THR 46
0.1793
THR 46
GLU 47
-0.1219
GLU 47
ALA 48
0.0244
ALA 48
CYS 49
-0.0068
CYS 49
LYS 50
-0.0289
LYS 50
LYS 51
-0.1478
LYS 51
LEU 52
0.0201
LEU 52
LEU 53
-0.0001
LEU 53
SER 54
-0.1720
SER 54
LEU 55
-0.0497
LEU 55
SER 56
0.0704
SER 56
SER 57
-0.0614
SER 57
VAL 58
-0.2333
VAL 58
SER 59
0.1388
SER 59
HIS 60
-0.1145
HIS 60
SER 61
0.1229
SER 61
MET 62
-0.1702
MET 62
SER 1
-0.2434
SER 1
GLU 2
-0.0327
GLU 2
MET 3
-0.0080
MET 3
ALA 4
0.0238
ALA 4
GLU 5
-0.0159
GLU 5
VAL 6
-0.0293
VAL 6
ILE 7
0.0439
ILE 7
ARG 8
-0.0660
ARG 8
ALA 9
-0.1011
ALA 9
SER 10
-0.0280
SER 10
ILE 11
0.0129
ILE 11
GLU 12
-0.1128
GLU 12
HIS 13
0.0170
HIS 13
PHE 14
0.0514
PHE 14
LEU 15
-0.0567
LEU 15
VAL 16
-0.0206
VAL 16
LEU 17
0.0165
LEU 17
LYS 18
-0.0413
LYS 18
GLN 19
-0.0395
GLN 19
LEU 20
-0.0532
LEU 20
ARG 21
0.0961
ARG 21
VAL 22
-0.0487
VAL 22
ASP 23
-0.0343
ASP 23
ALA 24
0.0433
ALA 24
TYR 25
-0.0231
TYR 25
PRO 26
-0.0069
PRO 26
GLU 27
-0.0366
GLU 27
LEU 28
0.0144
LEU 28
SER 29
0.0407
SER 29
ALA 30
-0.0078
ALA 30
GLN 31
-0.0650
GLN 31
CYS 32
0.0170
CYS 32
ALA 33
0.0284
ALA 33
GLN 34
-0.0721
GLN 34
LEU 35
-0.0025
LEU 35
GLN 36
-0.0095
GLN 36
LYS 37
-0.0455
LYS 37
ASP 38
-0.0268
ASP 38
ILE 39
-0.0177
ILE 39
SER 40
-0.0055
SER 40
LEU 41
-0.0619
LEU 41
ALA 42
0.0266
ALA 42
LYS 43
0.0023
LYS 43
ASP 44
0.0535
ASP 44
THR 45
-0.0744
THR 45
THR 46
0.1796
THR 46
GLU 47
-0.1219
GLU 47
ALA 48
0.0240
ALA 48
CYS 49
-0.0064
CYS 49
LYS 50
-0.0292
LYS 50
LYS 51
-0.1479
LYS 51
LEU 52
0.0200
LEU 52
LEU 53
-0.0000
LEU 53
SER 54
-0.1723
SER 54
LEU 55
-0.0497
LEU 55
SER 56
0.0704
SER 56
SER 57
-0.0617
SER 57
VAL 58
-0.2331
VAL 58
SER 59
0.1388
SER 59
HIS 60
-0.1145
HIS 60
SER 61
0.1224
SER 61
MET 62
-0.1700
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.