This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLU 2
-0.1645
GLU 2
MET 3
-0.1826
MET 3
ALA 4
0.0821
ALA 4
GLU 5
-0.0688
GLU 5
VAL 6
0.0465
VAL 6
ILE 7
-0.1131
ILE 7
ARG 8
0.0198
ARG 8
ALA 9
-0.1571
ALA 9
SER 10
-0.1206
SER 10
ILE 11
0.0410
ILE 11
GLU 12
-0.0971
GLU 12
HIS 13
0.0806
HIS 13
PHE 14
-0.2763
PHE 14
LEU 15
0.0244
LEU 15
VAL 16
-0.1763
VAL 16
LEU 17
-0.0917
LEU 17
LYS 18
0.0024
LYS 18
GLN 19
-0.0102
GLN 19
LEU 20
0.0278
LEU 20
ARG 21
-0.0894
ARG 21
VAL 22
0.0788
VAL 22
ASP 23
0.0351
ASP 23
ALA 24
-0.0505
ALA 24
TYR 25
-0.0072
TYR 25
PRO 26
0.0481
PRO 26
GLU 27
0.0113
GLU 27
LEU 28
0.0796
LEU 28
SER 29
0.0597
SER 29
ALA 30
0.0013
ALA 30
GLN 31
0.1249
GLN 31
CYS 32
-0.0463
CYS 32
ALA 33
0.0902
ALA 33
GLN 34
-0.0136
GLN 34
LEU 35
0.0664
LEU 35
GLN 36
0.0119
GLN 36
LYS 37
-0.0598
LYS 37
ASP 38
0.0441
ASP 38
ILE 39
-0.0785
ILE 39
SER 40
0.0793
SER 40
LEU 41
-0.0191
LEU 41
ALA 42
0.0366
ALA 42
LYS 43
-0.0233
LYS 43
ASP 44
0.0063
ASP 44
THR 45
-0.0808
THR 45
THR 46
0.1074
THR 46
GLU 47
0.0111
GLU 47
ALA 48
0.0590
ALA 48
CYS 49
-0.0007
CYS 49
LYS 50
-0.0124
LYS 50
LYS 51
0.1911
LYS 51
LEU 52
-0.0171
LEU 52
LEU 53
0.1939
LEU 53
SER 54
0.1207
SER 54
LEU 55
0.0193
LEU 55
SER 56
0.0732
SER 56
SER 57
0.0233
SER 57
VAL 58
0.3234
VAL 58
SER 59
0.0323
SER 59
HIS 60
0.1989
HIS 60
SER 61
0.0863
SER 61
MET 62
-0.0014
MET 62
SER 1
-0.0505
SER 1
GLU 2
0.1645
GLU 2
MET 3
0.1826
MET 3
ALA 4
-0.0821
ALA 4
GLU 5
0.0685
GLU 5
VAL 6
-0.0462
VAL 6
ILE 7
0.1126
ILE 7
ARG 8
-0.0198
ARG 8
ALA 9
0.1568
ALA 9
SER 10
0.1201
SER 10
ILE 11
-0.0413
ILE 11
GLU 12
0.0968
GLU 12
HIS 13
-0.0810
HIS 13
PHE 14
0.2762
PHE 14
LEU 15
-0.0239
LEU 15
VAL 16
0.1766
VAL 16
LEU 17
0.0912
LEU 17
LYS 18
-0.0021
LYS 18
GLN 19
0.0101
GLN 19
LEU 20
-0.0278
LEU 20
ARG 21
0.0898
ARG 21
VAL 22
-0.0792
VAL 22
ASP 23
-0.0344
ASP 23
ALA 24
0.0503
ALA 24
TYR 25
0.0071
TYR 25
PRO 26
-0.0477
PRO 26
GLU 27
-0.0106
GLU 27
LEU 28
-0.0796
LEU 28
SER 29
-0.0597
SER 29
ALA 30
-0.0012
ALA 30
GLN 31
-0.1242
GLN 31
CYS 32
0.0460
CYS 32
ALA 33
-0.0900
ALA 33
GLN 34
0.0132
GLN 34
LEU 35
-0.0664
LEU 35
GLN 36
-0.0117
GLN 36
LYS 37
0.0604
LYS 37
ASP 38
-0.0444
ASP 38
ILE 39
0.0785
ILE 39
SER 40
-0.0794
SER 40
LEU 41
0.0194
LEU 41
ALA 42
-0.0369
ALA 42
LYS 43
0.0232
LYS 43
ASP 44
-0.0066
ASP 44
THR 45
0.0806
THR 45
THR 46
-0.1075
THR 46
GLU 47
-0.0107
GLU 47
ALA 48
-0.0593
ALA 48
CYS 49
0.0006
CYS 49
LYS 50
0.0126
LYS 50
LYS 51
-0.1914
LYS 51
LEU 52
0.0172
LEU 52
LEU 53
-0.1939
LEU 53
SER 54
-0.1207
SER 54
LEU 55
-0.0197
LEU 55
SER 56
-0.0728
SER 56
SER 57
-0.0235
SER 57
VAL 58
-0.3237
VAL 58
SER 59
-0.0321
SER 59
HIS 60
-0.1983
HIS 60
SER 61
-0.0845
SER 61
MET 62
0.0020
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.