This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLU 2
-0.0322
GLU 2
MET 3
-0.0624
MET 3
ALA 4
0.0147
ALA 4
GLU 5
0.0120
GLU 5
VAL 6
0.0079
VAL 6
ILE 7
-0.0210
ILE 7
ARG 8
0.0390
ARG 8
ALA 9
0.0171
ALA 9
SER 10
0.0091
SER 10
ILE 11
-0.0224
ILE 11
GLU 12
0.1006
GLU 12
HIS 13
-0.0446
HIS 13
PHE 14
0.0591
PHE 14
LEU 15
0.0163
LEU 15
VAL 16
0.1860
VAL 16
LEU 17
0.0236
LEU 17
LYS 18
0.0609
LYS 18
GLN 19
0.0029
GLN 19
LEU 20
0.0319
LEU 20
ARG 21
0.1450
ARG 21
VAL 22
-0.3129
VAL 22
ASP 23
0.1446
ASP 23
ALA 24
-0.0564
ALA 24
TYR 25
-0.0783
TYR 25
PRO 26
0.0441
PRO 26
GLU 27
-0.0386
GLU 27
LEU 28
0.0122
LEU 28
SER 29
0.0231
SER 29
ALA 30
0.0328
ALA 30
GLN 31
-0.0995
GLN 31
CYS 32
0.0457
CYS 32
ALA 33
0.0471
ALA 33
GLN 34
-0.0511
GLN 34
LEU 35
-0.0315
LEU 35
GLN 36
0.0246
GLN 36
LYS 37
0.0749
LYS 37
ASP 38
-0.0541
ASP 38
ILE 39
0.0041
ILE 39
SER 40
0.0018
SER 40
LEU 41
0.0151
LEU 41
ALA 42
-0.0938
ALA 42
LYS 43
0.0394
LYS 43
ASP 44
-0.0763
ASP 44
THR 45
-0.0812
THR 45
THR 46
0.0639
THR 46
GLU 47
-0.1622
GLU 47
ALA 48
0.0141
ALA 48
CYS 49
-0.0874
CYS 49
LYS 50
0.0126
LYS 50
LYS 51
-0.1497
LYS 51
LEU 52
0.0296
LEU 52
LEU 53
-0.0418
LEU 53
SER 54
-0.1180
SER 54
LEU 55
-0.0336
LEU 55
SER 56
0.0333
SER 56
SER 57
-0.0646
SER 57
VAL 58
0.0416
VAL 58
SER 59
-0.0041
SER 59
HIS 60
0.1982
HIS 60
SER 61
-0.0426
SER 61
MET 62
0.1388
MET 62
SER 1
0.0815
SER 1
GLU 2
-0.0330
GLU 2
MET 3
-0.0625
MET 3
ALA 4
0.0155
ALA 4
GLU 5
0.0114
GLU 5
VAL 6
0.0079
VAL 6
ILE 7
-0.0213
ILE 7
ARG 8
0.0389
ARG 8
ALA 9
0.0168
ALA 9
SER 10
0.0091
SER 10
ILE 11
-0.0220
ILE 11
GLU 12
0.1004
GLU 12
HIS 13
-0.0447
HIS 13
PHE 14
0.0584
PHE 14
LEU 15
0.0167
LEU 15
VAL 16
0.1859
VAL 16
LEU 17
0.0237
LEU 17
LYS 18
0.0606
LYS 18
GLN 19
0.0032
GLN 19
LEU 20
0.0318
LEU 20
ARG 21
0.1445
ARG 21
VAL 22
-0.3133
VAL 22
ASP 23
0.1451
ASP 23
ALA 24
-0.0567
ALA 24
TYR 25
-0.0777
TYR 25
PRO 26
0.0446
PRO 26
GLU 27
-0.0386
GLU 27
LEU 28
0.0127
LEU 28
SER 29
0.0230
SER 29
ALA 30
0.0330
ALA 30
GLN 31
-0.0993
GLN 31
CYS 32
0.0452
CYS 32
ALA 33
0.0479
ALA 33
GLN 34
-0.0510
GLN 34
LEU 35
-0.0313
LEU 35
GLN 36
0.0250
GLN 36
LYS 37
0.0755
LYS 37
ASP 38
-0.0541
ASP 38
ILE 39
0.0037
ILE 39
SER 40
0.0015
SER 40
LEU 41
0.0151
LEU 41
ALA 42
-0.0939
ALA 42
LYS 43
0.0392
LYS 43
ASP 44
-0.0765
ASP 44
THR 45
-0.0808
THR 45
THR 46
0.0637
THR 46
GLU 47
-0.1621
GLU 47
ALA 48
0.0139
ALA 48
CYS 49
-0.0874
CYS 49
LYS 50
0.0130
LYS 50
LYS 51
-0.1495
LYS 51
LEU 52
0.0293
LEU 52
LEU 53
-0.0414
LEU 53
SER 54
-0.1178
SER 54
LEU 55
-0.0336
LEU 55
SER 56
0.0338
SER 56
SER 57
-0.0647
SER 57
VAL 58
0.0423
VAL 58
SER 59
-0.0039
SER 59
HIS 60
0.1982
HIS 60
SER 61
-0.0428
SER 61
MET 62
0.1391
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.