CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  opt_a  ***

CA strain for 2404032043392226964

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1001SER 1002 0.0977
SER 1002GLY 1003 -0.3486
GLY 1003LEU 1004 -0.1085
LEU 1004VAL 1005 0.2553
VAL 1005ALA 1006 0.1068
ALA 1006SER 1007 0.3051
SER 1007ASN 1008 0.1031
ASN 1008LEU 1009 0.2097
LEU 1009ASN 1010 0.2882
ASN 1010LEU 1011 0.0260
LEU 1011LYS 1012 0.1750
LYS 1012PRO 1013 -0.0501
PRO 1013GLY 1014 0.0133
GLY 1014GLU 1015 0.0965
GLU 1015LEU 1017 0.1557
LEU 1017ARG 1018 0.2462
ARG 1018VAL 1019 0.0338
VAL 1019ARG 1020 0.1635
ARG 1020GLY 1021 0.1272
GLY 1021GLU 1022 0.2451
GLU 1022VAL 1023 0.0528
VAL 1023ALA 1024 0.0095
ALA 1024PRO 1025 0.3066
PRO 1025ASP 1026 -0.0276
ASP 1026ALA 1027 -0.0261
ALA 1027LYS 1028 0.0169
LYS 1028SER 1029 -0.0032
SER 1029PHE 1030 0.0096
PHE 1030VAL 1031 0.0730
VAL 1031LEU 1032 0.0217
LEU 1032ASN 1033 0.0545
ASN 1033LEU 1034 0.0829
LEU 1034GLY 1035 0.0659
GLY 1035LYS 1036 0.0254
LYS 1036ASP 1037 0.0169
ASP 1037SER 1038 -0.0295
SER 1038ASN 1039 0.0609
ASN 1039ASN 1040 0.0147
ASN 1040LEU 1041 -0.0063
LEU 1041CYS 1042 0.0819
CYS 1042LEU 1043 -0.0745
LEU 1043HIS 1044 -0.0545
HIS 1044PHE 1045 -0.0819
PHE 1045ASN 1046 -0.0769
ASN 1046PRO 1047 -0.1188
PRO 1047ARG 1048 0.0450
ARG 1048PHE 1049 -0.2458
PHE 1049ASN 1050 0.2128
ASN 1050ALA 1051 -0.0035
ALA 1051HIS 1052 0.0815
HIS 1052GLY 1053 -0.0308
GLY 1053ASP 1054 0.0935
ASP 1054ALA 1055 -0.1505
ALA 1055ASN 1056 0.2346
ASN 1056THR 1057 -0.3796
THR 1057ILE 1058 0.0190
ILE 1058VAL 1059 -0.0666
VAL 1059CYS 1060 -0.2630
CYS 1060ASN 1061 -0.0654
ASN 1061SER 1062 -0.2682
SER 1062LYS 1063 0.0526
LYS 1063ASP 1064 -0.0076
ASP 1064ASP 1065 -0.0259
ASP 1065GLY 1066 -0.0135
GLY 1066ALA 1067 -0.0366
ALA 1067TRP 1068 -0.0743
TRP 1068GLY 1069 0.1131
GLY 1069THR 1070 -0.0821
THR 1070GLU 1071 -0.2347
GLU 1071GLN 1072 0.1255
GLN 1072ARG 1073 -0.3046
ARG 1073GLU 1074 0.1252
GLU 1074ALA 1075 -0.1192
ALA 1075VAL 1076 -0.0385
VAL 1076PHE 1077 -0.1700
PHE 1077PRO 1078 0.1856
PRO 1078PHE 1079 -0.1868
PHE 1079GLN 1080 -0.1769
GLN 1080PRO 1081 -0.2898
PRO 1081GLY 1082 0.0997
GLY 1082SER 1083 -0.0831
SER 1083VAL 1084 0.2132
VAL 1084ALA 1085 -0.1879
ALA 1085GLU 1086 0.2042
GLU 1086VAL 1087 -0.0644
VAL 1087CYS 1088 0.0675
CYS 1088ILE 1089 0.0502
ILE 1089THR 1090 0.0426
THR 1090PHE 1091 0.0213
PHE 1091ASP 1092 0.0754
ASP 1092GLN 1093 -0.0273
GLN 1093ALA 1094 -0.1209
ALA 1094ASN 1095 -0.0420
ASN 1095LEU 1096 0.0584
LEU 1096THR 1097 0.0113
THR 1097VAL 1098 -0.0701
VAL 1098LYS 1099 0.0306
LYS 1099LEU 1100 0.0224
LEU 1100PRO 1101 -0.1132
PRO 1101ASP 1102 -0.0974
ASP 1102GLY 1103 0.0077
GLY 1103TYR 1104 0.1326
TYR 1104GLU 1105 -0.1706
GLU 1105PHE 1106 0.1382
PHE 1106LYS 1107 -0.2621
LYS 1107PHE 1108 0.1801
PHE 1108PRO 1109 -0.1087
PRO 1109ASN 1110 -0.2966
ASN 1110ARG 1111 0.0385
ARG 1111LEU 1112 -0.2159
LEU 1112ASN 1113 0.0543
ASN 1113LEU 1114 0.1313
LEU 1114GLU 1115 -0.1570
GLU 1115ALA 1116 0.1333
ALA 1116ILE 1117 0.1563
ILE 1117ASN 1118 -0.1462
ASN 1118TYR 1119 0.1094
TYR 1119MET 1120 0.1951
MET 1120ALA 1121 0.1254
ALA 1121ALA 1122 0.2537
ALA 1122ASP 1123 0.0274
ASP 1123GLY 1124 0.1868
GLY 1124ASP 1125 0.2264
ASP 1125PHE 1126 0.1567
PHE 1126LYS 1127 -0.1338
LYS 1127ILE 1128 0.2903
ILE 1128LYS 1129 -0.0534
LYS 1129CYS 1130 0.3333
CYS 1130VAL 1131 0.4372
VAL 1131ALA 1132 -0.0592
ALA 1132PHE 1133 0.5046
PHE 1133ASP 1134 -0.2467

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.