CNRS Nantes University US2B US2B
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***  TLR4  ***

CA strain for 2404080857242955947

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLU 27PRO 28 0.0001
PRO 28CYS 29 -0.0001
CYS 29VAL 30 0.0002
VAL 30GLU 31 0.0013
GLU 31VAL 32 0.0003
VAL 32VAL 33 0.0000
VAL 33PRO 34 -0.0002
PRO 34ASN 35 0.0039
ASN 35ILE 36 -0.0001
ILE 36THR 37 0.0001
THR 37TYR 38 0.0001
TYR 38GLN 39 0.0049
GLN 39CYS 40 -0.0002
CYS 40MET 41 -0.0000
MET 41GLU 42 0.0000
GLU 42LEU 43 -0.0053
LEU 43ASN 44 -0.0000
ASN 44PHE 45 -0.0003
PHE 45TYR 46 0.0002
TYR 46LYS 47 -0.0015
LYS 47ILE 48 -0.0000
ILE 48PRO 49 -0.0000
PRO 49ASP 50 -0.0001
ASP 50ASN 51 0.0038
ASN 51LEU 52 -0.0002
LEU 52PRO 53 0.0004
PRO 53PHE 54 0.0000
PHE 54SER 55 -0.0018
SER 55THR 56 -0.0003
THR 56LYS 57 0.0000
LYS 57ASN 58 -0.0002
ASN 58LEU 59 0.0068
LEU 59ASP 60 0.0002
ASP 60LEU 61 -0.0001
LEU 61SER 62 -0.0003
SER 62PHE 63 0.0011
PHE 63ASN 64 0.0001
ASN 64PRO 65 -0.0002
PRO 65LEU 66 -0.0001
LEU 66ARG 67 0.0108
ARG 67HIS 68 -0.0001
HIS 68LEU 69 0.0003
LEU 69GLY 70 0.0004
GLY 70SER 71 -0.0164
SER 71TYR 72 0.0004
TYR 72SER 73 -0.0002
SER 73PHE 74 0.0004
PHE 74PHE 75 -0.0071
PHE 75SER 76 0.0001
SER 76PHE 77 0.0000
PHE 77PRO 78 -0.0000
PRO 78GLU 79 -0.0022
GLU 79LEU 80 -0.0000
LEU 80GLN 81 -0.0004
GLN 81VAL 82 0.0001
VAL 82LEU 83 0.0102
LEU 83ASP 84 -0.0003
ASP 84LEU 85 0.0001
LEU 85SER 86 -0.0001
SER 86ARG 87 0.0088
ARG 87CYS 88 -0.0001
CYS 88GLU 89 -0.0002
GLU 89ILE 90 0.0002
ILE 90GLN 91 0.0017
GLN 91THR 92 0.0004
THR 92ILE 93 -0.0002
ILE 93GLU 94 0.0002
GLU 94ASP 95 -0.0082
ASP 95GLY 96 -0.0000
GLY 96ALA 97 0.0003
ALA 97TYR 98 0.0004
TYR 98GLN 99 -0.0100
GLN 99SER 100 -0.0001
SER 100LEU 101 -0.0000
LEU 101SER 102 0.0001
SER 102HIS 103 -0.0068
HIS 103LEU 104 0.0001
LEU 104SER 105 -0.0002
SER 105THR 106 0.0003
THR 106LEU 107 0.0050
LEU 107ILE 108 -0.0000
ILE 108LEU 109 -0.0001
LEU 109THR 110 0.0001
THR 110GLY 111 0.0035
GLY 111ASN 112 -0.0001
ASN 112PRO 113 0.0001
PRO 113ILE 114 0.0003
ILE 114GLN 115 -0.0095
GLN 115SER 116 0.0005
SER 116LEU 117 -0.0001
LEU 117ALA 118 0.0003
ALA 118LEU 119 -0.0085
LEU 119GLY 120 0.0000
GLY 120ALA 121 0.0003
ALA 121PHE 122 0.0000
PHE 122SER 123 0.0046
SER 123GLY 124 0.0000
GLY 124LEU 125 0.0001
LEU 125SER 126 0.0001
SER 126SER 127 -0.0104
SER 127LEU 128 0.0004
LEU 128GLN 129 -0.0002
GLN 129LYS 130 -0.0000
LYS 130LEU 131 0.0190
LEU 131VAL 132 0.0000
VAL 132ALA 133 -0.0001
ALA 133VAL 134 0.0002
VAL 134GLU 135 0.0099
GLU 135THR 136 -0.0001
THR 136ASN 137 0.0000
ASN 137LEU 138 0.0001
LEU 138ALA 139 0.0312
ALA 139SER 140 0.0001
SER 140LEU 141 -0.0000
LEU 141GLU 142 0.0001
GLU 142ASN 143 0.0711
ASN 143PHE 144 0.0001
PHE 144PRO 145 0.0003
PRO 145ILE 146 -0.0000
ILE 146GLY 147 -0.0169
GLY 147HIS 148 0.0002
HIS 148LEU 149 -0.0000
LEU 149LYS 150 0.0003
LYS 150THR 151 0.0059
THR 151LEU 152 -0.0003
LEU 152LYS 153 -0.0001
LYS 153GLU 154 0.0002
GLU 154LEU 155 0.0197
LEU 155ASN 156 -0.0001
ASN 156VAL 157 -0.0001
VAL 157ALA 158 -0.0004
ALA 158HIS 159 0.0229
HIS 159ASN 160 -0.0005
ASN 160LEU 161 0.0006
LEU 161ILE 162 -0.0000
ILE 162GLN 163 0.0250
GLN 163SER 164 -0.0002
SER 164PHE 165 0.0001
PHE 165LYS 166 -0.0000
LYS 166LEU 167 0.0193
LEU 167PRO 168 -0.0004
PRO 168GLU 169 0.0001
GLU 169TYR 170 -0.0001
TYR 170PHE 171 -0.0203
PHE 171SER 172 -0.0000
SER 172ASN 173 -0.0001
ASN 173LEU 174 -0.0002
LEU 174THR 175 0.0190
THR 175ASN 176 -0.0004
ASN 176LEU 177 0.0000
LEU 177GLU 178 0.0002
GLU 178HIS 179 0.0190
HIS 179LEU 180 0.0002
LEU 180ASP 181 -0.0004
ASP 181LEU 182 0.0003
LEU 182SER 183 -0.0031
SER 183SER 184 0.0001
SER 184ASN 185 0.0000
ASN 185LYS 186 -0.0001
LYS 186ILE 187 -0.0025
ILE 187GLN 188 0.0000
GLN 188SER 189 -0.0001
SER 189ILE 190 0.0001
ILE 190TYR 191 -0.0192
TYR 191CYS 192 0.0000
CYS 192THR 193 0.0000
THR 193ASP 194 -0.0003
ASP 194LEU 195 0.0030
LEU 195ARG 196 0.0002
ARG 196VAL 197 0.0002
VAL 197LEU 198 0.0001
LEU 198HIS 199 0.0016
HIS 199GLN 200 0.0003
GLN 200MET 201 0.0005
MET 201PRO 202 0.0001
PRO 202LEU 203 -0.0198
LEU 203LEU 204 -0.0002
LEU 204ASN 205 0.0005
ASN 205LEU 206 0.0001
LEU 206SER 207 0.0110
SER 207LEU 208 0.0003
LEU 208ASP 209 -0.0000
ASP 209LEU 210 -0.0002
LEU 210SER 211 0.0072
SER 211LEU 212 -0.0003
LEU 212ASN 213 0.0000
ASN 213PRO 214 0.0003
PRO 214MET 215 -0.0094
MET 215ASN 216 0.0000
ASN 216PHE 217 0.0000
PHE 217ILE 218 0.0000
ILE 218GLN 219 -0.0150
GLN 219PRO 220 -0.0002
PRO 220GLY 221 -0.0002
GLY 221ALA 222 -0.0001
ALA 222PHE 223 -0.0208
PHE 223LYS 224 -0.0001
LYS 224GLU 225 0.0002
GLU 225ILE 226 -0.0004
ILE 226ARG 227 -0.0161
ARG 227LEU 228 -0.0001
LEU 228HIS 229 0.0001
HIS 229LYS 230 0.0001
LYS 230LEU 231 0.0168
LEU 231THR 232 -0.0002
THR 232LEU 233 -0.0005
LEU 233ARG 234 -0.0001
ARG 234ASN 235 0.0043
ASN 235ASN 236 0.0000
ASN 236PHE 237 0.0003
PHE 237ASP 238 -0.0002
ASP 238SER 239 -0.0014
SER 239LEU 240 -0.0002
LEU 240ASN 241 -0.0001
ASN 241VAL 242 0.0005
VAL 242MET 243 0.0009
MET 243LYS 244 0.0002
LYS 244THR 245 0.0001
THR 245CYS 246 -0.0000
CYS 246ILE 247 0.0055
ILE 247GLN 248 -0.0003
GLN 248GLY 249 0.0001
GLY 249LEU 250 0.0002
LEU 250ALA 251 0.0071
ALA 251GLY 252 0.0002
GLY 252LEU 253 0.0004
LEU 253GLU 254 -0.0003
GLU 254VAL 255 0.0069
VAL 255HIS 256 -0.0001
HIS 256ARG 257 0.0003
ARG 257LEU 258 0.0005
LEU 258VAL 259 0.0188
VAL 259LEU 260 0.0002
LEU 260GLY 261 0.0003
GLY 261GLU 262 -0.0000
GLU 262PHE 263 0.0125
PHE 263ARG 264 0.0002
ARG 264ASN 265 0.0001
ASN 265GLU 266 0.0002
GLU 266GLY 267 0.0015
GLY 267ASN 268 -0.0001
ASN 268LEU 269 0.0003
LEU 269GLU 270 -0.0002
GLU 270LYS 271 -0.0092
LYS 271PHE 272 0.0001
PHE 272ASP 273 0.0003
ASP 273LYS 274 -0.0001
LYS 274SER 275 0.0234
SER 275ALA 276 -0.0002
ALA 276LEU 277 0.0001
LEU 277GLU 278 0.0002
GLU 278GLY 279 0.0070
GLY 279LEU 280 -0.0003
LEU 280CYS 281 -0.0001
CYS 281ASN 282 0.0001
ASN 282LEU 283 -0.0155
LEU 283THR 284 0.0003
THR 284ILE 285 -0.0001
ILE 285GLU 286 0.0001
GLU 286GLU 287 0.0239
GLU 287PHE 288 0.0001
PHE 288ARG 289 -0.0000
ARG 289LEU 290 -0.0006
LEU 290ALA 291 0.0030
ALA 291TYR 292 0.0000
TYR 292LEU 293 0.0001
LEU 293ASP 294 0.0001
ASP 294TYR 295 -0.0178
TYR 295TYR 296 -0.0004
TYR 296LEU 297 -0.0001
LEU 297ASP 298 0.0001
ASP 298ASP 299 -0.0116
ASP 299ILE 300 0.0003
ILE 300ILE 301 0.0002
ILE 301ASP 302 0.0001
ASP 302LEU 303 -0.0020
LEU 303PHE 304 0.0001
PHE 304ASN 305 -0.0000
ASN 305CYS 306 0.0002
CYS 306LEU 307 -0.0023
LEU 307THR 308 0.0000
THR 308ASN 309 -0.0002
ASN 309VAL 310 -0.0001
VAL 310SER 311 0.0067
SER 311SER 312 0.0002
SER 312PHE 313 0.0000
PHE 313SER 314 -0.0002
SER 314LEU 315 -0.0049
LEU 315VAL 316 0.0003
VAL 316SER 317 -0.0001
SER 317VAL 318 -0.0002
VAL 318THR 319 -0.0177
THR 319ILE 320 -0.0003
ILE 320GLU 321 -0.0002
GLU 321ARG 322 -0.0001
ARG 322VAL 323 -0.0114
VAL 323LYS 324 0.0002
LYS 324ASP 325 -0.0001
ASP 325PHE 326 -0.0001
PHE 326SER 327 0.0013
SER 327TYR 328 -0.0006
TYR 328ASN 329 0.0001
ASN 329PHE 330 -0.0003
PHE 330GLY 331 0.0054
GLY 331TRP 332 0.0003
TRP 332GLN 333 -0.0001
GLN 333HIS 334 0.0005
HIS 334LEU 335 -0.0076
LEU 335GLU 336 0.0000
GLU 336LEU 337 -0.0001
LEU 337VAL 338 0.0003
VAL 338ASN 339 -0.0053
ASN 339CYS 340 -0.0000
CYS 340LYS 341 -0.0001
LYS 341PHE 342 0.0001
PHE 342GLY 343 -0.0045
GLY 343GLN 344 -0.0004
GLN 344PHE 345 -0.0000
PHE 345PRO 346 0.0004
PRO 346THR 347 0.0094
THR 347LEU 348 0.0001
LEU 348LYS 349 0.0001
LYS 349LEU 350 0.0000
LEU 350LYS 351 0.0051
LYS 351SER 352 -0.0000
SER 352LEU 353 -0.0001
LEU 353LYS 354 -0.0003
LYS 354ARG 355 0.0046
ARG 355LEU 356 0.0000
LEU 356THR 357 0.0000
THR 357PHE 358 -0.0003
PHE 358THR 359 0.0022
THR 359SER 360 0.0001
SER 360ASN 361 0.0000
ASN 361LYS 362 -0.0003
LYS 362GLY 363 -0.0208
GLY 363GLY 364 -0.0002
GLY 364ASN 365 0.0001
ASN 365ALA 366 -0.0001
ALA 366PHE 367 0.0079
PHE 367SER 368 0.0003
SER 368GLU 369 -0.0000
GLU 369VAL 370 -0.0002
VAL 370ASP 371 0.0128
ASP 371LEU 372 0.0001
LEU 372PRO 373 0.0001
PRO 373SER 374 0.0001
SER 374LEU 375 0.0221
LEU 375GLU 376 -0.0001
GLU 376PHE 377 0.0002
PHE 377LEU 378 -0.0005
LEU 378ASP 379 -0.0022
ASP 379LEU 380 0.0001
LEU 380SER 381 0.0004
SER 381ARG 382 0.0002
ARG 382ASN 383 -0.0040
ASN 383GLY 384 -0.0001
GLY 384LEU 385 -0.0000
LEU 385SER 386 -0.0000
SER 386PHE 387 -0.0073
PHE 387LYS 388 -0.0001
LYS 388GLY 389 -0.0001
GLY 389CYS 390 0.0001
CYS 390CYS 391 0.0094
CYS 391SER 392 -0.0001
SER 392GLN 393 0.0003
GLN 393SER 394 0.0003
SER 394ASP 395 0.0205
ASP 395PHE 396 -0.0001
PHE 396GLY 397 -0.0000
GLY 397THR 398 -0.0003
THR 398THR 399 -0.0044
THR 399SER 400 0.0002
SER 400LEU 401 0.0000
LEU 401LYS 402 -0.0001
LYS 402TYR 403 -0.0104
TYR 403LEU 404 -0.0002
LEU 404ASP 405 0.0003
ASP 405LEU 406 0.0001
LEU 406SER 407 -0.0071
SER 407PHE 408 0.0004
PHE 408ASN 409 0.0003
ASN 409GLY 410 -0.0001
GLY 410VAL 411 0.0004
VAL 411ILE 412 -0.0002
ILE 412THR 413 0.0002
THR 413MET 414 0.0000
MET 414SER 415 0.0211
SER 415SER 416 -0.0002
SER 416ASN 417 0.0002
ASN 417PHE 418 -0.0000
PHE 418LEU 419 0.0076
LEU 419GLY 420 -0.0002
GLY 420LEU 421 -0.0000
LEU 421GLU 422 -0.0001
GLU 422GLN 423 0.0068
GLN 423LEU 424 0.0002
LEU 424GLU 425 -0.0002
GLU 425HIS 426 0.0001
HIS 426LEU 427 -0.0180
LEU 427ASP 428 0.0005
ASP 428PHE 429 -0.0001
PHE 429GLN 430 0.0004
GLN 430HIS 431 -0.0239
HIS 431SER 432 0.0003
SER 432ASN 433 0.0001
ASN 433LEU 434 0.0001
LEU 434LYS 435 0.0164
LYS 435GLN 436 0.0001
GLN 436MET 437 0.0000
MET 437SER 438 -0.0001
SER 438GLU 439 0.0053
GLU 439PHE 440 -0.0002
PHE 440SER 441 -0.0003
SER 441VAL 442 0.0004
VAL 442PHE 443 0.0097
PHE 443LEU 444 0.0001
LEU 444SER 445 0.0003
SER 445LEU 446 0.0000
LEU 446ARG 447 -0.0018
ARG 447ASN 448 -0.0003
ASN 448LEU 449 0.0001
LEU 449ILE 450 0.0004
ILE 450TYR 451 -0.0158
TYR 451LEU 452 0.0001
LEU 452ASP 453 0.0004
ASP 453ILE 454 -0.0004
ILE 454SER 455 -0.0034
SER 455HIS 456 0.0002
HIS 456THR 457 0.0001
THR 457HIS 458 -0.0001
HIS 458THR 459 0.0084
THR 459ARG 460 0.0001
ARG 460VAL 461 -0.0001
VAL 461ALA 462 -0.0001
ALA 462PHE 463 0.0114
PHE 463ASN 464 0.0001
ASN 464GLY 465 0.0001
GLY 465ILE 466 -0.0001
ILE 466PHE 467 0.0064
PHE 467ASN 468 -0.0003
ASN 468GLY 469 0.0006
GLY 469LEU 470 -0.0002
LEU 470SER 471 -0.0012
SER 471SER 472 0.0003
SER 472LEU 473 0.0003
LEU 473GLU 474 -0.0001
GLU 474VAL 475 -0.0159
VAL 475LEU 476 0.0001
LEU 476LYS 477 0.0002
LYS 477MET 478 0.0000
MET 478ALA 479 0.0034
ALA 479GLY 480 0.0002
GLY 480ASN 481 -0.0002
ASN 481SER 482 0.0000
SER 482PHE 483 0.0239
PHE 483GLN 484 0.0000
GLN 484GLU 485 -0.0002
GLU 485ASN 486 0.0001
ASN 486PHE 487 0.0109
PHE 487LEU 488 -0.0002
LEU 488PRO 489 0.0000
PRO 489ASP 490 -0.0000
ASP 490ILE 491 -0.0259
ILE 491PHE 492 0.0003
PHE 492THR 493 0.0000
THR 493GLU 494 -0.0004
GLU 494LEU 495 0.0198
LEU 495ARG 496 0.0001
ARG 496ASN 497 0.0000
ASN 497LEU 498 -0.0004
LEU 498THR 499 0.0006
THR 499PHE 500 0.0002
PHE 500LEU 501 -0.0002
LEU 501ASP 502 0.0002
ASP 502LEU 503 -0.0074
LEU 503SER 504 -0.0002
SER 504GLN 505 0.0001
GLN 505CYS 506 -0.0001
CYS 506GLN 507 0.0088
GLN 507LEU 508 0.0003
LEU 508GLU 509 -0.0002
GLU 509GLN 510 0.0005
GLN 510LEU 511 0.0052
LEU 511SER 512 0.0000
SER 512PRO 513 -0.0002
PRO 513THR 514 -0.0004
THR 514ALA 515 0.0082
ALA 515PHE 516 -0.0000
PHE 516ASN 517 -0.0001
ASN 517SER 518 -0.0001
SER 518LEU 519 0.0121
LEU 519SER 520 -0.0001
SER 520SER 521 -0.0004
SER 521LEU 522 0.0000
LEU 522GLN 523 -0.0017
GLN 523VAL 524 0.0001
VAL 524LEU 525 0.0000
LEU 525ASN 526 -0.0002
ASN 526MET 527 -0.0087
MET 527SER 528 0.0004
SER 528HIS 529 -0.0005
HIS 529ASN 530 -0.0001
ASN 530ASN 531 0.0136
ASN 531PHE 532 0.0004
PHE 532PHE 533 -0.0001
PHE 533SER 534 -0.0002
SER 534LEU 535 0.0013
LEU 535ASP 536 0.0001
ASP 536THR 537 -0.0004
THR 537PHE 538 0.0003
PHE 538PRO 539 -0.0104
PRO 539TYR 540 0.0000
TYR 540LYS 541 -0.0004
LYS 541CYS 542 0.0000
CYS 542LEU 543 0.0112
LEU 543ASN 544 0.0001
ASN 544SER 545 0.0000
SER 545LEU 546 0.0004
LEU 546GLN 547 -0.0053
GLN 547VAL 548 0.0000
VAL 548LEU 549 0.0001
LEU 549ASP 550 -0.0001
ASP 550TYR 551 -0.0059
TYR 551SER 552 -0.0005
SER 552LEU 553 -0.0001
LEU 553ASN 554 -0.0003
ASN 554HIS 555 0.0123
HIS 555ILE 556 0.0001
ILE 556MET 557 -0.0001
MET 557THR 558 -0.0002
THR 558SER 559 -0.0001
SER 559LYS 560 -0.0001
LYS 560LYS 561 0.0002
LYS 561GLN 562 -0.0004
GLN 562GLU 563 -0.0051
GLU 563LEU 564 0.0001
LEU 564GLN 565 0.0002
GLN 565HIS 566 -0.0000
HIS 566PHE 567 0.0152
PHE 567PRO 568 0.0006
PRO 568SER 569 -0.0001
SER 569SER 570 0.0002
SER 570LEU 571 -0.0053
LEU 571ALA 572 -0.0000
ALA 572PHE 573 0.0004
PHE 573LEU 574 0.0001
LEU 574ASN 575 -0.0051
ASN 575LEU 576 0.0002
LEU 576THR 577 -0.0002
THR 577GLN 578 0.0002
GLN 578ASN 579 -0.0073
ASN 579ASP 580 -0.0002
ASP 580PHE 581 -0.0000
PHE 581ALA 582 -0.0000
ALA 582CYS 583 0.0010
CYS 583THR 584 -0.0001
THR 584CYS 585 0.0002
CYS 585GLU 586 -0.0003
GLU 586HIS 587 -0.0021
HIS 587GLN 588 0.0001
GLN 588SER 589 0.0002
SER 589PHE 590 -0.0002
PHE 590LEU 591 -0.0059
LEU 591GLN 592 -0.0002
GLN 592TRP 593 -0.0001
TRP 593ILE 594 -0.0003
ILE 594LYS 595 -0.0062
LYS 595ASP 596 0.0001
ASP 596GLN 597 0.0001
GLN 597ARG 598 0.0000
ARG 598GLN 599 0.0132
GLN 599LEU 600 -0.0003
LEU 600LEU 601 0.0001
LEU 601VAL 602 -0.0001
VAL 602GLU 603 0.0002
GLU 603VAL 604 -0.0002
VAL 604GLU 605 0.0002
GLU 605ARG 606 0.0003
ARG 606MET 607 -0.0040
MET 607GLU 608 0.0003
GLU 608CYS 609 0.0001
CYS 609ALA 610 0.0003
ALA 610THR 611 0.0001
THR 611PRO 612 0.0003
PRO 612SER 613 -0.0001
SER 613ASP 614 0.0001
ASP 614LYS 615 0.0020
LYS 615GLN 616 -0.0001
GLN 616GLY 617 -0.0002
GLY 617MET 618 -0.0004
MET 618PRO 619 -0.0018
PRO 619VAL 620 -0.0001
VAL 620LEU 621 -0.0000
LEU 621SER 622 -0.0005
SER 622LEU 623 0.0083
LEU 623ASN 624 -0.0004
ASN 624ILE 625 0.0000
ILE 625THR 626 0.0002
THR 626CYS 627 0.0049

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.