Should you encounter any unexpected behaviour,
please let us know.

* pla-open-conform *

CA strain for 2404082100263055204

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
SER 1 LEU 2 -0.0001

LEU 2 PHE 3 0.0246

PHE 3 GLU 4 -0.0001

GLU 4 LEU 5 0.0038

LEU 5 GLY 6 -0.0000

GLY 6 LYS 7 -0.0634

LYS 7 MET 8 -0.0004

MET 8 ILE 9 -0.0007

ILE 9 LEU 10 -0.0002

LEU 10 GLN 11 -0.1315

GLN 11 GLU 12 0.0003

GLU 12 THR 13 -0.0775

THR 13 GLY 14 0.0002

GLY 14 LYS 15 -0.1964

LYS 15 ASN 16 0.0003

ASN 16 PRO 17 -0.0221

PRO 17 ALA 18 0.0001

ALA 18 LYS 19 -0.0417

LYS 19 SER 20 -0.0001

SER 20 TYR 21 0.0275

TYR 21 GLY 22 0.0004

GLY 22 ALA 23 0.0245

ALA 23 TYR 24 -0.0002

TYR 24 GLY 25 -0.0144

GLY 25 CYS 26 -0.0002

CYS 26 ASN 27 0.0127

ASN 27 CYS 28 -0.0000

CYS 28 GLY 29 0.0096

GLY 29 VAL 30 0.0004

VAL 30 LEU 31 -0.0042

LEU 31 GLY 32 0.0000

GLY 32 ARG 33 0.0491

ARG 33 GLY 34 0.0002

GLY 34 LYS 35 0.0373

LYS 35 PRO 36 0.0004

PRO 36 LYS 37 0.1165

LYS 37 ASP 38 0.0001

ASP 38 ALA 39 -0.1293

ALA 39 THR 40 0.0002

THR 40 ASP 41 -0.1108

ASP 41 ARG 42 -0.0000

ARG 42 CYS 43 -0.0682

CYS 43 CYS 44 -0.0002

CYS 44 TYR 45 -0.0796

TYR 45 VAL 46 0.0002

VAL 46 HIS 47 -0.0025

HIS 47 LYS 48 0.0000

LYS 48 CYS 49 -0.0476

CYS 49 CYS 50 -0.0000

CYS 50 TYR 51 0.0111

TYR 51 LYS 52 0.0001

LYS 52 LYS 53 -0.0310

LYS 53 LEU 54 0.0000

LEU 54 THR 55 -0.0253

THR 55 GLY 56 0.0001

GLY 56 CYS 57 -0.0105

CYS 57 ASN 58 -0.0002

ASN 58 PRO 59 0.0136

PRO 59 LYS 60 -0.0000

LYS 60 LYS 61 0.0311

LYS 61 ASP 62 -0.0001

ASP 62 ARG 63 0.0652

ARG 63 TYR 64 -0.0000

TYR 64 SER 65 0.1101

SER 65 TYR 66 -0.0002

TYR 66 SER 67 0.0768

SER 67 TRP 68 0.0001

TRP 68 LYS 69 0.0510

LYS 69 ASP 70 0.0002

ASP 70 LYS 71 0.0038

LYS 71 THR 72 0.0001

THR 72 ILE 73 -0.0405

ILE 73 VAL 74 0.0001

VAL 74 CYS 75 -0.0246

CYS 75 GLY 76 0.0006

GLY 76 GLU 77 0.0511

GLU 77 ASN 78 0.0004

ASN 78 ASN 79 0.0177

ASN 79 PRO 80 0.0001

PRO 80 CYS 81 0.0232

CYS 81 LEU 82 0.0001

LEU 82 LYS 83 -0.0119

LYS 83 GLU 84 0.0001

GLU 84 LEU 85 0.0027

LEU 85 CYS 86 0.0001

CYS 86 GLU 87 -0.0045

GLU 87 CYS 88 -0.0002

CYS 88 ASP 89 -0.0614

ASP 89 LYS 90 -0.0000

LYS 90 ALA 91 -0.0881

ALA 91 VAL 92 0.0002

VAL 92 ALA 93 -0.1879

ALA 93 ILE 94 0.0003

ILE 94 CYS 95 -0.1642

CYS 95 LEU 96 -0.0001

LEU 96 ARG 97 -0.2545

ARG 97 GLU 98 -0.0003

GLU 98 ASN 99 -0.2241

ASN 99 LEU 100 0.0001

LEU 100 GLY 101 -0.0481

GLY 101 THR 102 -0.0001

THR 102 TYR 103 0.0590

TYR 103 ASN 104 -0.0001

ASN 104 LYS 105 0.0158

LYS 105 LYS 106 -0.0004

LYS 106 TYR 107 0.0479

TYR 107 ARG 108 0.0003

ARG 108 TYR 109 -0.0212

TYR 109 ALA 110 -0.0001

ALA 110 LEU 111 -0.0684

LEU 111 LYS 112 -0.0001

LYS 112 PRO 113 0.0716

PRO 113 PHE 114 -0.0001

PHE 114 CYS 115 -0.0990

CYS 115 ALA 116 0.0003

ALA 116 LYS 117 -0.0202

LYS 117 ALA 118 0.0003

ALA 118 ASP 119 0.0606

ASP 119 PRO 120 0.0002

PRO 120 CYS 121 0.0148

CYS 121 SER 1 -0.1114

SER 1 LEU 2 0.0001

LEU 2 PHE 3 0.0050

PHE 3 GLU 4 -0.0000

GLU 4 LEU 5 0.0189

LEU 5 GLY 6 0.0001

GLY 6 LYS 7 -0.0476

LYS 7 MET 8 0.0002

MET 8 ILE 9 -0.0013

ILE 9 LEU 10 0.0002

LEU 10 GLN 11 -0.1179

GLN 11 GLU 12 0.0001

GLU 12 THR 13 -0.1153

THR 13 GLY 14 0.0000

GLY 14 LYS 15 -0.3578

LYS 15 ASN 16 0.0001

ASN 16 PRO 17 0.0051

PRO 17 ALA 18 -0.0000

ALA 18 LYS 19 0.0084

LYS 19 SER 20 0.0002

SER 20 TYR 21 0.0190

TYR 21 GLY 22 0.0005

GLY 22 ALA 23 -0.0267

ALA 23 TYR 24 -0.0000

TYR 24 GLY 25 -0.0418

GLY 25 CYS 26 0.0000

CYS 26 ASN 27 0.0117

ASN 27 CYS 28 0.0004

CYS 28 GLY 29 -0.0079

GLY 29 VAL 30 -0.0000

VAL 30 LEU 31 0.0159

LEU 31 GLY 32 0.0002

GLY 32 ARG 33 0.0688

ARG 33 GLY 34 0.0005

GLY 34 LYS 35 0.0304

LYS 35 PRO 36 -0.0002

PRO 36 LYS 37 0.0456

LYS 37 ASP 38 0.0001

ASP 38 ALA 39 -0.1349

ALA 39 THR 40 0.0001

THR 40 ASP 41 -0.0898

ASP 41 ARG 42 -0.0002

ARG 42 CYS 43 -0.0834

CYS 43 CYS 44 0.0000

CYS 44 TYR 45 -0.0797

TYR 45 VAL 46 0.0004

VAL 46 HIS 47 0.0010

HIS 47 LYS 48 -0.0002

LYS 48 CYS 49 -0.0146

CYS 49 CYS 50 -0.0000

CYS 50 TYR 51 -0.0130

TYR 51 LYS 52 0.0002

LYS 52 LYS 53 0.0183

LYS 53 LEU 54 0.0000

LEU 54 THR 55 -0.0443

THR 55 GLY 56 -0.0003

GLY 56 CYS 57 -0.0017

CYS 57 ASN 58 0.0003

ASN 58 PRO 59 -0.0165

PRO 59 LYS 60 0.0003

LYS 60 ALA 61 0.0533

ALA 61 ASP 62 -0.0002

ASP 62 ARG 63 0.0537

ARG 63 TYR 64 -0.0002

TYR 64 SER 65 0.0929

SER 65 TYR 66 0.0004

TYR 66 SER 67 -0.0086

SER 67 TRP 68 -0.0003

TRP 68 LYS 69 -0.0182

LYS 69 ASP 70 -0.0001

ASP 70 LYS 71 -0.0538

LYS 71 THR 72 -0.0001

THR 72 ILE 73 -0.0090

ILE 73 VAL 74 -0.0001

VAL 74 CYS 75 -0.0159

CYS 75 GLY 76 0.0003

GLY 76 ALA 77 0.0137

ALA 77 ASN 78 -0.0003

ASN 78 ASN 79 0.0155

ASN 79 PRO 80 0.0004

PRO 80 CYS 81 0.0223

CYS 81 LEU 82 -0.0002

LEU 82 LYS 83 -0.0067

LYS 83 GLU 84 0.0000

GLU 84 LEU 85 0.0081

LEU 85 CYS 86 0.0000

CYS 86 GLU 87 0.0013

GLU 87 CYS 88 -0.0001

CYS 88 ASP 89 -0.0467

ASP 89 LYS 90 0.0002

LYS 90 ALA 91 -0.0874

ALA 91 VAL 92 0.0001

VAL 92 ALA 93 -0.1606

ALA 93 ILE 94 0.0002

ILE 94 CYS 95 -0.1526

CYS 95 LEU 96 0.0005

LEU 96 ARG 97 -0.1602

ARG 97 GLU 98 0.0002

GLU 98 ASN 99 -0.2752

ASN 99 LEU 100 0.0003

LEU 100 GLY 101 -0.0326

GLY 101 THR 102 0.0000

THR 102 TYR 103 0.0415

TYR 103 ASN 104 -0.0001

ASN 104 LYS 105 -0.0140

LYS 105 LYS 106 -0.0002

LYS 106 TYR 107 0.0388

TYR 107 ARG 108 -0.0002

ARG 108 TYR 109 -0.0326

TYR 109 HIS 110 -0.0004

HIS 110 LEU 111 -0.0077

LEU 111 LYS 112 0.0002

LYS 112 PRO 113 0.0135

PRO 113 PHE 114 -0.0001

PHE 114 CYS 115 0.0028

CYS 115 LYS 116 -0.0002

LYS 116 LYS 117 0.0732

LYS 117 ALA 118 0.0005

ALA 118 ASP 119 0.0200

ASP 119 PRO 120 -0.0001

PRO 120 CYS 121 0.0009

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** pla-open-conform ***

CA strain for 2404082100263055204

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* pla-open-conform *