Should you encounter any unexpected behaviour,
please let us know.

* pla-open-conform *

CA strain for 2404082100263055204

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
SER 1 LEU 2 0.0001

LEU 2 PHE 3 -0.0347

PHE 3 GLU 4 -0.0003

GLU 4 LEU 5 -0.0023

LEU 5 GLY 6 0.0001

GLY 6 LYS 7 -0.0733

LYS 7 MET 8 0.0003

MET 8 ILE 9 0.0174

ILE 9 LEU 10 0.0001

LEU 10 GLN 11 -0.1013

GLN 11 GLU 12 -0.0003

GLU 12 THR 13 -0.0024

THR 13 GLY 14 -0.0002

GLY 14 LYS 15 -0.0632

LYS 15 ASN 16 -0.0001

ASN 16 PRO 17 0.0219

PRO 17 ALA 18 0.0003

ALA 18 LYS 19 -0.0024

LYS 19 SER 20 -0.0003

SER 20 TYR 21 0.0106

TYR 21 GLY 22 -0.0000

GLY 22 ALA 23 -0.0250

ALA 23 TYR 24 -0.0000

TYR 24 GLY 25 -0.0072

GLY 25 CYS 26 0.0001

CYS 26 ASN 27 0.0011

ASN 27 CYS 28 0.0000

CYS 28 GLY 29 -0.0138

GLY 29 VAL 30 0.0003

VAL 30 LEU 31 0.0117

LEU 31 GLY 32 -0.0001

GLY 32 ARG 33 -0.0041

ARG 33 GLY 34 -0.0001

GLY 34 LYS 35 -0.0068

LYS 35 PRO 36 -0.0003

PRO 36 LYS 37 -0.0143

LYS 37 ASP 38 0.0002

ASP 38 ALA 39 0.0139

ALA 39 THR 40 -0.0001

THR 40 ASP 41 0.0037

ASP 41 ARG 42 0.0002

ARG 42 CYS 43 0.0120

CYS 43 CYS 44 0.0004

CYS 44 TYR 45 0.0005

TYR 45 VAL 46 0.0000

VAL 46 HIS 47 0.0016

HIS 47 LYS 48 -0.0001

LYS 48 CYS 49 0.0207

CYS 49 CYS 50 -0.0001

CYS 50 TYR 51 -0.0125

TYR 51 LYS 52 0.0000

LYS 52 LYS 53 0.0262

LYS 53 LEU 54 0.0001

LEU 54 THR 55 -0.0028

THR 55 GLY 56 0.0001

GLY 56 CYS 57 0.0032

CYS 57 ASN 58 0.0004

ASN 58 PRO 59 0.0002

PRO 59 LYS 60 0.0001

LYS 60 LYS 61 -0.0090

LYS 61 ASP 62 -0.0001

ASP 62 ARG 63 -0.0153

ARG 63 TYR 64 -0.0002

TYR 64 SER 65 -0.0423

SER 65 TYR 66 -0.0000

TYR 66 SER 67 -0.0365

SER 67 TRP 68 0.0000

TRP 68 LYS 69 -0.0671

LYS 69 ASP 70 0.0003

ASP 70 LYS 71 0.0068

LYS 71 THR 72 0.0002

THR 72 ILE 73 0.0265

ILE 73 VAL 74 -0.0002

VAL 74 CYS 75 0.0052

CYS 75 GLY 76 0.0001

GLY 76 GLU 77 -0.0099

GLU 77 ASN 78 0.0000

ASN 78 ASN 79 -0.0015

ASN 79 PRO 80 -0.0001

PRO 80 CYS 81 0.0054

CYS 81 LEU 82 0.0000

LEU 82 LYS 83 -0.0073

LYS 83 GLU 84 0.0001

GLU 84 LEU 85 0.0032

LEU 85 CYS 86 0.0003

CYS 86 GLU 87 -0.0013

GLU 87 CYS 88 0.0006

CYS 88 ASP 89 -0.0031

ASP 89 LYS 90 0.0001

LYS 90 ALA 91 0.0638

ALA 91 VAL 92 0.0004

VAL 92 ALA 93 -0.0157

ALA 93 ILE 94 0.0002

ILE 94 CYS 95 0.0481

CYS 95 LEU 96 -0.0002

LEU 96 ARG 97 0.0410

ARG 97 GLU 98 0.0004

GLU 98 ASN 99 0.0634

ASN 99 LEU 100 0.0003

LEU 100 GLY 101 -0.0154

GLY 101 THR 102 0.0003

THR 102 TYR 103 -0.0028

TYR 103 ASN 104 -0.0000

ASN 104 LYS 105 0.0043

LYS 105 LYS 106 0.0001

LYS 106 TYR 107 -0.0025

TYR 107 ARG 108 0.0002

ARG 108 TYR 109 0.0044

TYR 109 ALA 110 -0.0001

ALA 110 LEU 111 0.0014

LEU 111 LYS 112 -0.0001

LYS 112 PRO 113 -0.0134

PRO 113 PHE 114 -0.0001

PHE 114 CYS 115 0.0207

CYS 115 ALA 116 -0.0004

ALA 116 LYS 117 0.0017

LYS 117 ALA 118 0.0005

ALA 118 ASP 119 -0.0055

ASP 119 PRO 120 0.0001

PRO 120 CYS 121 0.0089

CYS 121 SER 1 -0.0457

SER 1 LEU 2 0.0002

LEU 2 PHE 3 -0.0301

PHE 3 GLU 4 -0.0002

GLU 4 LEU 5 -0.0062

LEU 5 GLY 6 -0.0003

GLY 6 LYS 7 -0.0479

LYS 7 MET 8 -0.0001

MET 8 ILE 9 0.0075

ILE 9 LEU 10 0.0002

LEU 10 GLN 11 -0.0849

GLN 11 GLU 12 -0.0003

GLU 12 THR 13 -0.0081

THR 13 GLY 14 0.0000

GLY 14 LYS 15 -0.0518

LYS 15 ASN 16 0.0002

ASN 16 PRO 17 0.0122

PRO 17 ALA 18 -0.0000

ALA 18 LYS 19 -0.0136

LYS 19 SER 20 -0.0003

SER 20 TYR 21 0.0120

TYR 21 GLY 22 -0.0003

GLY 22 ALA 23 -0.0161

ALA 23 TYR 24 0.0001

TYR 24 GLY 25 -0.0075

GLY 25 CYS 26 -0.0003

CYS 26 ASN 27 0.0005

ASN 27 CYS 28 0.0001

CYS 28 GLY 29 -0.0009

GLY 29 VAL 30 0.0001

VAL 30 LEU 31 -0.0154

LEU 31 GLY 32 0.0002

GLY 32 ARG 33 -0.0174

ARG 33 GLY 34 0.0001

GLY 34 LYS 35 -0.0076

LYS 35 PRO 36 -0.0002

PRO 36 LYS 37 -0.0086

LYS 37 ASP 38 -0.0001

ASP 38 ALA 39 0.0192

ALA 39 THR 40 -0.0000

THR 40 ASP 41 0.0051

ASP 41 ARG 42 0.0002

ARG 42 CYS 43 0.0126

CYS 43 CYS 44 0.0002

CYS 44 TYR 45 0.0006

TYR 45 VAL 46 0.0001

VAL 46 HIS 47 0.0022

HIS 47 LYS 48 0.0003

LYS 48 CYS 49 0.0072

CYS 49 CYS 50 0.0000

CYS 50 TYR 51 -0.0041

TYR 51 LYS 52 0.0000

LYS 52 LYS 53 0.0037

LYS 53 LEU 54 0.0000

LEU 54 THR 55 0.0003

THR 55 GLY 56 -0.0002

GLY 56 CYS 57 0.0015

CYS 57 ASN 58 -0.0000

ASN 58 PRO 59 0.0023

PRO 59 LYS 60 -0.0001

LYS 60 ALA 61 -0.0155

ALA 61 ASP 62 0.0003

ASP 62 ARG 63 -0.0152

ARG 63 TYR 64 0.0001

TYR 64 SER 65 -0.0471

SER 65 TYR 66 0.0001

TYR 66 SER 67 -0.0567

SER 67 TRP 68 0.0000

TRP 68 LYS 69 -0.0723

LYS 69 ASP 70 -0.0000

ASP 70 LYS 71 -0.0180

LYS 71 THR 72 -0.0004

THR 72 ILE 73 0.0145

ILE 73 VAL 74 0.0000

VAL 74 CYS 75 0.0030

CYS 75 GLY 76 -0.0001

GLY 76 ALA 77 -0.0096

ALA 77 ASN 78 0.0003

ASN 78 ASN 79 -0.0003

ASN 79 PRO 80 -0.0004

PRO 80 CYS 81 0.0038

CYS 81 LEU 82 -0.0003

LEU 82 LYS 83 -0.0054

LYS 83 GLU 84 0.0001

GLU 84 LEU 85 0.0051

LEU 85 CYS 86 0.0002

CYS 86 GLU 87 -0.0021

GLU 87 CYS 88 0.0002

CYS 88 ASP 89 -0.0028

ASP 89 LYS 90 0.0000

LYS 90 ALA 91 0.0567

ALA 91 VAL 92 -0.0000

VAL 92 ALA 93 -0.0138

ALA 93 ILE 94 0.0000

ILE 94 CYS 95 0.0480

CYS 95 LEU 96 0.0000

LEU 96 ARG 97 0.0343

ARG 97 GLU 98 0.0001

GLU 98 ASN 99 0.0735

ASN 99 LEU 100 0.0002

LEU 100 GLY 101 -0.0188

GLY 101 THR 102 -0.0001

THR 102 TYR 103 -0.0048

TYR 103 ASN 104 0.0001

ASN 104 LYS 105 0.0036

LYS 105 LYS 106 0.0004

LYS 106 TYR 107 -0.0019

TYR 107 ARG 108 0.0001

ARG 108 TYR 109 0.0036

TYR 109 HIS 110 0.0001

HIS 110 LEU 111 0.0004

LEU 111 LYS 112 -0.0003

LYS 112 PRO 113 -0.0089

PRO 113 PHE 114 0.0000

PHE 114 CYS 115 0.0065

CYS 115 LYS 116 -0.0001

LYS 116 LYS 117 -0.0040

LYS 117 ALA 118 0.0001

ALA 118 ASP 119 -0.0007

ASP 119 PRO 120 0.0000

PRO 120 CYS 121 0.0126

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** pla-open-conform ***

CA strain for 2404082100263055204

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* pla-open-conform *