Should you encounter any unexpected behaviour,
please let us know.

* pla-open-conform *

CA strain for 2404082100263055204

--- normal mode 8 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
SER 1 LEU 2 -0.0000

LEU 2 PHE 3 0.0170

PHE 3 GLU 4 -0.0001

GLU 4 LEU 5 -0.0173

LEU 5 GLY 6 0.0002

GLY 6 LYS 7 -0.0048

LYS 7 MET 8 0.0001

MET 8 ILE 9 -0.0197

ILE 9 LEU 10 -0.0002

LEU 10 GLN 11 -0.0032

GLN 11 GLU 12 -0.0000

GLU 12 THR 13 0.0148

THR 13 GLY 14 -0.0002

GLY 14 LYS 15 0.1261

LYS 15 ASN 16 -0.0001

ASN 16 PRO 17 0.0253

PRO 17 ALA 18 -0.0004

ALA 18 LYS 19 -0.0158

LYS 19 SER 20 -0.0002

SER 20 TYR 21 0.0213

TYR 21 GLY 22 -0.0001

GLY 22 ALA 23 0.0235

ALA 23 TYR 24 -0.0000

TYR 24 GLY 25 0.0107

GLY 25 CYS 26 0.0001

CYS 26 ASN 27 -0.0054

ASN 27 CYS 28 -0.0001

CYS 28 GLY 29 0.0063

GLY 29 VAL 30 -0.0002

VAL 30 LEU 31 0.0065

LEU 31 GLY 32 -0.0003

GLY 32 ARG 33 -0.0016

ARG 33 GLY 34 0.0005

GLY 34 LYS 35 -0.0078

LYS 35 PRO 36 -0.0002

PRO 36 LYS 37 0.0007

LYS 37 ASP 38 -0.0001

ASP 38 ALA 39 -0.0077

ALA 39 THR 40 0.0000

THR 40 ASP 41 -0.0116

ASP 41 ARG 42 -0.0000

ARG 42 CYS 43 0.0072

CYS 43 CYS 44 0.0000

CYS 44 TYR 45 -0.0052

TYR 45 VAL 46 -0.0000

VAL 46 HIS 47 0.0094

HIS 47 LYS 48 -0.0004

LYS 48 CYS 49 0.0083

CYS 49 CYS 50 -0.0001

CYS 50 TYR 51 0.0008

TYR 51 LYS 52 0.0003

LYS 52 LYS 53 0.0048

LYS 53 LEU 54 -0.0003

LEU 54 THR 55 -0.0101

THR 55 GLY 56 -0.0002

GLY 56 CYS 57 0.0057

CYS 57 ASN 58 0.0001

ASN 58 PRO 59 -0.0002

PRO 59 LYS 60 -0.0001

LYS 60 LYS 61 -0.0074

LYS 61 ASP 62 -0.0003

ASP 62 ARG 63 -0.0004

ARG 63 TYR 64 -0.0001

TYR 64 SER 65 -0.0040

SER 65 TYR 66 0.0001

TYR 66 SER 67 0.0369

SER 67 TRP 68 0.0003

TRP 68 LYS 69 0.0043

LYS 69 ASP 70 -0.0003

ASP 70 LYS 71 0.0205

LYS 71 THR 72 0.0002

THR 72 ILE 73 -0.0960

ILE 73 VAL 74 0.0001

VAL 74 CYS 75 -0.1213

CYS 75 GLY 76 -0.0002

GLY 76 GLU 77 -0.0162

GLU 77 ASN 78 0.0001

ASN 78 ASN 79 -0.0052

ASN 79 PRO 80 -0.0001

PRO 80 CYS 81 0.0025

CYS 81 LEU 82 0.0001

LEU 82 LYS 83 -0.0128

LYS 83 GLU 84 0.0001

GLU 84 LEU 85 0.0062

LEU 85 CYS 86 0.0004

CYS 86 GLU 87 0.0022

GLU 87 CYS 88 0.0001

CYS 88 ASP 89 0.0161

ASP 89 LYS 90 -0.0001

LYS 90 ALA 91 0.0112

ALA 91 VAL 92 0.0001

VAL 92 ALA 93 0.0133

ALA 93 ILE 94 0.0002

ILE 94 CYS 95 0.0043

CYS 95 LEU 96 0.0001

LEU 96 ARG 97 -0.0214

ARG 97 GLU 98 0.0000

GLU 98 ASN 99 -0.0163

ASN 99 LEU 100 0.0002

LEU 100 GLY 101 -0.0203

GLY 101 THR 102 0.0002

THR 102 TYR 103 -0.0056

TYR 103 ASN 104 0.0001

ASN 104 LYS 105 0.0098

LYS 105 LYS 106 0.0000

LYS 106 TYR 107 -0.0119

TYR 107 ARG 108 0.0001

ARG 108 TYR 109 0.0119

TYR 109 ALA 110 -0.0001

ALA 110 LEU 111 0.0156

LEU 111 LYS 112 -0.0004

LYS 112 PRO 113 0.0010

PRO 113 PHE 114 0.0002

PHE 114 CYS 115 -0.0048

CYS 115 ALA 116 -0.0002

ALA 116 LYS 117 0.0009

LYS 117 ALA 118 0.0002

ALA 118 ASP 119 0.0093

ASP 119 PRO 120 -0.0003

PRO 120 CYS 121 0.0074

CYS 121 SER 1 0.0723

SER 1 LEU 2 0.0001

LEU 2 PHE 3 0.0076

PHE 3 GLU 4 0.0004

GLU 4 LEU 5 -0.0194

LEU 5 GLY 6 0.0004

GLY 6 LYS 7 -0.0193

LYS 7 MET 8 -0.0002

MET 8 ILE 9 -0.0186

ILE 9 LEU 10 -0.0002

LEU 10 GLN 11 -0.0270

GLN 11 GLU 12 0.0004

GLU 12 THR 13 0.0146

THR 13 GLY 14 -0.0002

GLY 14 LYS 15 0.1912

LYS 15 ASN 16 -0.0001

ASN 16 PRO 17 0.0055

PRO 17 ALA 18 0.0003

ALA 18 LYS 19 -0.0466

LYS 19 SER 20 0.0003

SER 20 TYR 21 0.0115

TYR 21 GLY 22 -0.0001

GLY 22 ALA 23 0.0242

ALA 23 TYR 24 0.0002

TYR 24 GLY 25 0.0124

GLY 25 CYS 26 0.0002

CYS 26 ASN 27 -0.0069

ASN 27 CYS 28 -0.0001

CYS 28 GLY 29 0.0077

GLY 29 VAL 30 -0.0004

VAL 30 LEU 31 0.0010

LEU 31 GLY 32 -0.0002

GLY 32 ARG 33 -0.0071

ARG 33 GLY 34 -0.0001

GLY 34 LYS 35 -0.0108

LYS 35 PRO 36 -0.0000

PRO 36 LYS 37 -0.0044

LYS 37 ASP 38 -0.0002

ASP 38 ALA 39 -0.0076

ALA 39 THR 40 0.0000

THR 40 ASP 41 -0.0125

ASP 41 ARG 42 0.0000

ARG 42 CYS 43 0.0063

CYS 43 CYS 44 0.0003

CYS 44 TYR 45 -0.0086

TYR 45 VAL 46 -0.0004

VAL 46 HIS 47 0.0138

HIS 47 LYS 48 0.0001

LYS 48 CYS 49 0.0067

CYS 49 CYS 50 -0.0000

CYS 50 TYR 51 0.0012

TYR 51 LYS 52 -0.0002

LYS 52 LYS 53 0.0040

LYS 53 LEU 54 -0.0001

LEU 54 THR 55 -0.0090

THR 55 GLY 56 -0.0002

GLY 56 CYS 57 0.0035

CYS 57 ASN 58 -0.0003

ASN 58 PRO 59 0.0069

PRO 59 LYS 60 -0.0002

LYS 60 ALA 61 -0.0210

ALA 61 ASP 62 -0.0001

ASP 62 ARG 63 0.0078

ARG 63 TYR 64 -0.0001

TYR 64 SER 65 -0.0037

SER 65 TYR 66 -0.0001

TYR 66 SER 67 0.0754

SER 67 TRP 68 -0.0003

TRP 68 LYS 69 0.0041

LYS 69 ASP 70 0.0000

ASP 70 LYS 71 -0.0316

LYS 71 THR 72 -0.0002

THR 72 ILE 73 -0.1506

ILE 73 VAL 74 0.0002

VAL 74 CYS 75 -0.0910

CYS 75 GLY 76 -0.0002

GLY 76 ALA 77 -0.0239

ALA 77 ASN 78 0.0002

ASN 78 ASN 79 -0.0026

ASN 79 PRO 80 0.0001

PRO 80 CYS 81 0.0040

CYS 81 LEU 82 -0.0001

LEU 82 LYS 83 -0.0160

LYS 83 GLU 84 0.0001

GLU 84 LEU 85 0.0064

LEU 85 CYS 86 0.0000

CYS 86 GLU 87 -0.0017

GLU 87 CYS 88 -0.0002

CYS 88 ASP 89 0.0166

ASP 89 LYS 90 0.0003

LYS 90 ALA 91 0.0080

ALA 91 VAL 92 0.0002

VAL 92 ALA 93 0.0083

ALA 93 ILE 94 0.0002

ILE 94 CYS 95 0.0222

CYS 95 LEU 96 -0.0001

LEU 96 ARG 97 -0.0272

ARG 97 GLU 98 -0.0002

GLU 98 ASN 99 -0.0040

ASN 99 LEU 100 0.0001

LEU 100 GLY 101 -0.0322

GLY 101 THR 102 0.0000

THR 102 TYR 103 -0.0022

TYR 103 ASN 104 -0.0001

ASN 104 LYS 105 0.0105

LYS 105 LYS 106 0.0000

LYS 106 TYR 107 -0.0056

TYR 107 ARG 108 0.0001

ARG 108 TYR 109 0.0106

TYR 109 HIS 110 0.0001

HIS 110 LEU 111 0.0124

LEU 111 LYS 112 0.0004

LYS 112 PRO 113 0.0020

PRO 113 PHE 114 0.0001

PHE 114 CYS 115 0.0001

CYS 115 LYS 116 -0.0003

LYS 116 LYS 117 0.0072

LYS 117 ALA 118 -0.0002

ALA 118 ASP 119 0.0083

ASP 119 PRO 120 -0.0000

PRO 120 CYS 121 0.0121

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** pla-open-conform ***

CA strain for 2404082100263055204

--- normal mode 8 ---

Should you encounter any unexpected behaviour,
please let us know.

* pla-open-conform *