Should you encounter any unexpected behaviour,
please let us know.

* pla-open-conform *

CA strain for 2404082100263055204

--- normal mode 9 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
SER 1 LEU 2 0.0002

LEU 2 PHE 3 -0.0079

PHE 3 GLU 4 -0.0004

GLU 4 LEU 5 -0.0017

LEU 5 GLY 6 0.0003

GLY 6 LYS 7 0.0053

LYS 7 MET 8 0.0001

MET 8 ILE 9 0.0060

ILE 9 LEU 10 0.0002

LEU 10 GLN 11 0.0276

GLN 11 GLU 12 -0.0002

GLU 12 THR 13 -0.0039

THR 13 GLY 14 0.0002

GLY 14 LYS 15 0.1000

LYS 15 ASN 16 0.0000

ASN 16 PRO 17 0.0215

PRO 17 ALA 18 0.0002

ALA 18 LYS 19 -0.0021

LYS 19 SER 20 -0.0001

SER 20 TYR 21 0.0036

TYR 21 GLY 22 0.0001

GLY 22 ALA 23 0.0103

ALA 23 TYR 24 -0.0003

TYR 24 GLY 25 0.0103

GLY 25 CYS 26 0.0003

CYS 26 ASN 27 -0.0112

ASN 27 CYS 28 0.0001

CYS 28 GLY 29 0.0054

GLY 29 VAL 30 -0.0000

VAL 30 LEU 31 0.0004

LEU 31 GLY 32 0.0002

GLY 32 ARG 33 0.0044

ARG 33 GLY 34 0.0003

GLY 34 LYS 35 -0.0090

LYS 35 PRO 36 -0.0002

PRO 36 LYS 37 -0.0113

LYS 37 ASP 38 -0.0001

ASP 38 ALA 39 0.0140

ALA 39 THR 40 0.0005

THR 40 ASP 41 0.0260

ASP 41 ARG 42 0.0001

ARG 42 CYS 43 -0.0196

CYS 43 CYS 44 -0.0001

CYS 44 TYR 45 0.0135

TYR 45 VAL 46 0.0001

VAL 46 HIS 47 -0.0224

HIS 47 LYS 48 -0.0004

LYS 48 CYS 49 -0.0082

CYS 49 CYS 50 -0.0001

CYS 50 TYR 51 0.0134

TYR 51 LYS 52 -0.0002

LYS 52 LYS 53 -0.0333

LYS 53 LEU 54 -0.0002

LEU 54 THR 55 0.0059

THR 55 GLY 56 0.0001

GLY 56 CYS 57 -0.0040

CYS 57 ASN 58 0.0002

ASN 58 PRO 59 0.0117

PRO 59 LYS 60 -0.0000

LYS 60 LYS 61 0.0052

LYS 61 ASP 62 0.0002

ASP 62 ARG 63 -0.0150

ARG 63 TYR 64 0.0002

TYR 64 SER 65 -0.0224

SER 65 TYR 66 -0.0001

TYR 66 SER 67 -0.1429

SER 67 TRP 68 -0.0001

TRP 68 LYS 69 0.0566

LYS 69 ASP 70 -0.0001

ASP 70 LYS 71 -0.0122

LYS 71 THR 72 0.0001

THR 72 ILE 73 -0.0310

ILE 73 VAL 74 0.0002

VAL 74 CYS 75 -0.0642

CYS 75 GLY 76 -0.0004

GLY 76 GLU 77 -0.0293

GLU 77 ASN 78 -0.0001

ASN 78 ASN 79 -0.0079

ASN 79 PRO 80 -0.0000

PRO 80 CYS 81 -0.0079

CYS 81 LEU 82 -0.0000

LEU 82 LYS 83 0.0085

LYS 83 GLU 84 0.0002

GLU 84 LEU 85 -0.0019

LEU 85 CYS 86 -0.0001

CYS 86 GLU 87 0.0106

GLU 87 CYS 88 -0.0001

CYS 88 ASP 89 -0.0009

ASP 89 LYS 90 -0.0002

LYS 90 ALA 91 -0.0826

ALA 91 VAL 92 0.0002

VAL 92 ALA 93 0.0208

ALA 93 ILE 94 0.0001

ILE 94 CYS 95 -0.0617

CYS 95 LEU 96 0.0001

LEU 96 ARG 97 0.0791

ARG 97 GLU 98 -0.0001

GLU 98 ASN 99 0.0162

ASN 99 LEU 100 -0.0000

LEU 100 GLY 101 0.0102

GLY 101 THR 102 0.0002

THR 102 TYR 103 -0.0154

TYR 103 ASN 104 -0.0001

ASN 104 LYS 105 -0.0022

LYS 105 LYS 106 0.0000

LYS 106 TYR 107 -0.0142

TYR 107 ARG 108 0.0001

ARG 108 TYR 109 0.0093

TYR 109 ALA 110 0.0001

ALA 110 LEU 111 0.0224

LEU 111 LYS 112 0.0000

LYS 112 PRO 113 -0.0136

PRO 113 PHE 114 0.0000

PHE 114 CYS 115 0.0005

CYS 115 ALA 116 0.0000

ALA 116 LYS 117 0.0023

LYS 117 ALA 118 0.0001

ALA 118 ASP 119 -0.0040

ASP 119 PRO 120 -0.0003

PRO 120 CYS 121 -0.0236

CYS 121 SER 1 0.0555

SER 1 LEU 2 0.0000

LEU 2 PHE 3 -0.0128

PHE 3 GLU 4 0.0000

GLU 4 LEU 5 0.0057

LEU 5 GLY 6 0.0000

GLY 6 LYS 7 -0.0185

LYS 7 MET 8 0.0002

MET 8 ILE 9 0.0049

ILE 9 LEU 10 -0.0001

LEU 10 GLN 11 -0.0382

GLN 11 GLU 12 0.0001

GLU 12 THR 13 -0.0067

THR 13 GLY 14 -0.0001

GLY 14 LYS 15 -0.1922

LYS 15 ASN 16 -0.0003

ASN 16 PRO 17 -0.0091

PRO 17 ALA 18 -0.0000

ALA 18 LYS 19 0.0127

LYS 19 SER 20 -0.0004

SER 20 TYR 21 0.0059

TYR 21 GLY 22 -0.0001

GLY 22 ALA 23 -0.0141

ALA 23 TYR 24 0.0002

TYR 24 GLY 25 -0.0170

GLY 25 CYS 26 0.0000

CYS 26 ASN 27 0.0127

ASN 27 CYS 28 0.0000

CYS 28 GLY 29 -0.0117

GLY 29 VAL 30 -0.0003

VAL 30 LEU 31 -0.0081

LEU 31 GLY 32 -0.0001

GLY 32 ARG 33 -0.0081

ARG 33 GLY 34 0.0001

GLY 34 LYS 35 0.0082

LYS 35 PRO 36 0.0001

PRO 36 LYS 37 0.0056

LYS 37 ASP 38 0.0002

ASP 38 ALA 39 -0.0129

ALA 39 THR 40 0.0001

THR 40 ASP 41 -0.0258

ASP 41 ARG 42 -0.0002

ARG 42 CYS 43 0.0158

CYS 43 CYS 44 -0.0002

CYS 44 TYR 45 -0.0191

TYR 45 VAL 46 0.0005

VAL 46 HIS 47 0.0179

HIS 47 LYS 48 -0.0003

LYS 48 CYS 49 0.0011

CYS 49 CYS 50 0.0002

CYS 50 TYR 51 -0.0079

TYR 51 LYS 52 -0.0001

LYS 52 LYS 53 0.0092

LYS 53 LEU 54 0.0001

LEU 54 THR 55 0.0022

THR 55 GLY 56 -0.0002

GLY 56 CYS 57 0.0022

CYS 57 ASN 58 -0.0000

ASN 58 PRO 59 -0.0102

PRO 59 LYS 60 -0.0003

LYS 60 ALA 61 -0.0009

ALA 61 ASP 62 -0.0002

ASP 62 ARG 63 0.0241

ARG 63 TYR 64 0.0002

TYR 64 SER 65 0.0452

SER 65 TYR 66 -0.0000

TYR 66 SER 67 0.2334

SER 67 TRP 68 0.0001

TRP 68 LYS 69 0.0071

LYS 69 ASP 70 0.0001

ASP 70 LYS 71 0.0426

LYS 71 THR 72 0.0003

THR 72 ILE 73 0.0128

ILE 73 VAL 74 -0.0004

VAL 74 CYS 75 0.0709

CYS 75 GLY 76 0.0003

GLY 76 ALA 77 0.0125

ALA 77 ASN 78 -0.0001

ASN 78 ASN 79 0.0005

ASN 79 PRO 80 0.0002

PRO 80 CYS 81 0.0120

CYS 81 LEU 82 0.0002

LEU 82 LYS 83 -0.0098

LYS 83 GLU 84 0.0001

GLU 84 LEU 85 0.0085

LEU 85 CYS 86 0.0001

CYS 86 GLU 87 -0.0162

GLU 87 CYS 88 0.0001

CYS 88 ASP 89 0.0025

ASP 89 LYS 90 0.0002

LYS 90 ALA 91 0.0946

ALA 91 VAL 92 -0.0001

VAL 92 ALA 93 -0.0206

ALA 93 ILE 94 -0.0001

ILE 94 CYS 95 0.0692

CYS 95 LEU 96 -0.0003

LEU 96 ARG 97 -0.0633

ARG 97 GLU 98 0.0000

GLU 98 ASN 99 -0.0356

ASN 99 LEU 100 0.0004

LEU 100 GLY 101 -0.0197

GLY 101 THR 102 -0.0003

THR 102 TYR 103 0.0103

TYR 103 ASN 104 0.0001

ASN 104 LYS 105 -0.0015

LYS 105 LYS 106 -0.0000

LYS 106 TYR 107 0.0097

TYR 107 ARG 108 -0.0001

ARG 108 TYR 109 -0.0081

TYR 109 HIS 110 0.0002

HIS 110 LEU 111 -0.0043

LEU 111 LYS 112 0.0000

LYS 112 PRO 113 0.0051

PRO 113 PHE 114 0.0000

PHE 114 CYS 115 0.0056

CYS 115 LYS 116 -0.0001

LYS 116 LYS 117 0.0260

LYS 117 ALA 118 -0.0001

ALA 118 ASP 119 -0.0033

ASP 119 PRO 120 -0.0002

PRO 120 CYS 121 0.0229

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** pla-open-conform ***

CA strain for 2404082100263055204

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.

* pla-open-conform *