Should you encounter any unexpected behaviour,
please let us know.

* 1bkz_dimer *

CA strain for 240416190557731252

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
SER 1 ASN 2 0.0002

ASN 2 VAL 3 -0.0118

VAL 3 PRO 4 -0.0002

PRO 4 HIS 5 -0.0180

HIS 5 LYS 6 -0.0003

LYS 6 SER 7 -0.0613

SER 7 SER 8 -0.0000

SER 8 LEU 9 -0.0393

LEU 9 PRO 10 -0.0003

PRO 10 GLU 11 -0.0393

GLU 11 GLY 12 0.0001

GLY 12 ILE 13 -0.1230

ILE 13 ARG 14 -0.0002

ARG 14 PRO 15 -0.0922

PRO 15 GLY 16 -0.0002

GLY 16 THR 17 0.0162

THR 17 VAL 18 -0.0000

VAL 18 LEU 19 0.0982

LEU 19 ARG 20 -0.0001

ARG 20 ILE 21 0.1622

ILE 21 ARG 22 0.0001

ARG 22 GLY 23 0.2772

GLY 23 LEU 24 -0.0001

LEU 24 VAL 25 0.0484

VAL 25 PRO 26 -0.0001

PRO 26 PRO 27 0.0097

PRO 27 ASN 28 0.0002

ASN 28 ALA 29 -0.0497

ALA 29 SER 30 0.0000

SER 30 ARG 31 -0.0308

ARG 31 PHE 32 0.0000

PHE 32 HIS 33 -0.0659

HIS 33 VAL 34 0.0001

VAL 34 ASN 35 -0.0201

ASN 35 LEU 36 -0.0003

LEU 36 LEU 37 -0.0629

LEU 37 CYS 38 -0.0002

CYS 38 GLY 39 -0.0124

GLY 39 GLU 40 0.0001

GLU 40 GLU 41 -0.1140

GLU 41 GLN 42 -0.0001

GLN 42 GLY 43 0.0709

GLY 43 SER 44 0.0000

SER 44 ASP 45 -0.0018

ASP 45 ALA 46 0.0003

ALA 46 ALA 47 -0.0640

ALA 47 LEU 48 0.0003

LEU 48 HIS 49 -0.0424

HIS 49 PHE 50 -0.0001

PHE 50 ASN 51 -0.0256

ASN 51 PRO 52 -0.0003

PRO 52 ARG 53 0.0241

ARG 53 LEU 54 -0.0000

LEU 54 ASP 55 0.0381

ASP 55 THR 56 0.0000

THR 56 SER 57 0.0505

SER 57 GLU 58 -0.0004

GLU 58 VAL 59 0.0204

VAL 59 VAL 60 0.0001

VAL 60 PHE 61 -0.0109

PHE 61 ASN 62 0.0001

ASN 62 SER 63 0.0097

SER 63 LYS 64 -0.0000

LYS 64 GLU 65 0.0286

GLU 65 GLN 66 0.0001

GLN 66 GLY 67 -0.0162

GLY 67 SER 68 0.0002

SER 68 TRP 69 0.0173

TRP 69 GLY 70 0.0002

GLY 70 ARG 71 0.0859

ARG 71 GLU 72 -0.0000

GLU 72 GLU 73 0.0038

GLU 73 ARG 74 -0.0002

ARG 74 GLY 75 0.0163

GLY 75 PRO 76 -0.0001

PRO 76 GLY 77 0.0074

GLY 77 VAL 78 0.0003

VAL 78 PRO 79 0.0536

PRO 79 PHE 80 -0.0004

PHE 80 GLN 81 0.1767

GLN 81 ARG 82 0.0001

ARG 82 GLY 83 -0.0134

GLY 83 GLN 84 0.0003

GLN 84 PRO 85 0.0996

PRO 85 PHE 86 0.0000

PHE 86 GLU 87 0.3322

GLU 87 VAL 88 0.0000

VAL 88 LEU 89 0.1854

LEU 89 ILE 90 0.0002

ILE 90 ILE 91 0.1224

ILE 91 ALA 92 0.0002

ALA 92 SER 93 0.0627

SER 93 ASP 94 -0.0000

ASP 94 ASP 95 -0.0406

ASP 95 GLY 96 0.0000

GLY 96 PHE 97 -0.0170

PHE 97 LYS 98 -0.0002

LYS 98 ALA 99 0.1602

ALA 99 VAL 100 0.0002

VAL 100 VAL 101 0.1306

VAL 101 GLY 102 0.0001

GLY 102 ASP 103 0.1974

ASP 103 ALA 104 -0.0000

ALA 104 GLN 105 -0.1458

GLN 105 TYR 106 -0.0002

TYR 106 HIS 107 -0.0251

HIS 107 HIS 108 -0.0002

HIS 108 PHE 109 -0.0211

PHE 109 ARG 110 0.0002

ARG 110 HIS 111 0.0765

HIS 111 ARG 112 -0.0001

ARG 112 LEU 113 0.1332

LEU 113 PRO 114 -0.0002

PRO 114 LEU 115 -0.1282

LEU 115 ALA 116 -0.0001

ALA 116 ARG 117 -0.1449

ARG 117 VAL 118 -0.0001

VAL 118 ARG 119 0.0256

ARG 119 LEU 120 0.0001

LEU 120 VAL 121 -0.0350

VAL 121 GLU 122 -0.0003

GLU 122 VAL 123 -0.0540

VAL 123 GLY 124 -0.0000

GLY 124 GLY 125 -0.1242

GLY 125 ASP 126 0.0004

ASP 126 VAL 127 0.0896

VAL 127 GLN 128 0.0002

GLN 128 LEU 129 0.0478

LEU 129 ASP 130 0.0003

ASP 130 SER 131 0.0902

SER 131 VAL 132 -0.0002

VAL 132 ARG 133 0.0544

ARG 133 ILE 134 -0.0002

ILE 134 PHE 135 -0.0282

PHE 135 SER 1 -0.5184

SER 1 ASN 2 0.0000

ASN 2 VAL 3 -0.0223

VAL 3 PRO 4 -0.0002

PRO 4 HIS 5 -0.5065

HIS 5 LYS 6 0.0001

LYS 6 SER 7 -0.2543

SER 7 SER 8 -0.0002

SER 8 LEU 9 -0.1327

LEU 9 PRO 10 -0.0000

PRO 10 GLU 11 -0.0486

GLU 11 GLY 12 0.0001

GLY 12 ILE 13 -0.1990

ILE 13 ARG 14 -0.0002

ARG 14 PRO 15 -0.1196

PRO 15 GLY 16 0.0002

GLY 16 THR 17 -0.1782

THR 17 VAL 18 -0.0002

VAL 18 LEU 19 -0.2581

LEU 19 ARG 20 0.0000

ARG 20 ILE 21 -0.1670

ILE 21 ARG 22 -0.0001

ARG 22 GLY 23 -0.2962

GLY 23 LEU 24 -0.0002

LEU 24 VAL 25 0.0076

VAL 25 PRO 26 0.0001

PRO 26 PRO 27 0.0276

PRO 27 ASN 28 -0.0000

ASN 28 ALA 29 0.0331

ALA 29 SER 30 -0.0001

SER 30 ARG 31 0.0052

ARG 31 PHE 32 0.0002

PHE 32 HIS 33 -0.0363

HIS 33 VAL 34 -0.0002

VAL 34 ASN 35 0.0843

ASN 35 LEU 36 0.0003

LEU 36 LEU 37 -0.0041

LEU 37 CYS 38 -0.0001

CYS 38 GLY 39 0.0059

GLY 39 GLU 40 -0.0002

GLU 40 GLU 41 -0.0226

GLU 41 GLN 42 0.0000

GLN 42 GLY 43 0.0415

GLY 43 SER 44 0.0001

SER 44 ASP 45 -0.0192

ASP 45 ALA 46 -0.0000

ALA 46 ALA 47 -0.0156

ALA 47 LEU 48 -0.0001

LEU 48 HIS 49 0.0043

HIS 49 PHE 50 -0.0001

PHE 50 ASN 51 -0.0534

ASN 51 PRO 52 -0.0003

PRO 52 ARG 53 -0.0339

ARG 53 LEU 54 -0.0003

LEU 54 ASP 55 -0.0023

ASP 55 THR 56 0.0000

THR 56 SER 57 0.0258

SER 57 GLU 58 0.0001

GLU 58 VAL 59 -0.0221

VAL 59 VAL 60 0.0005

VAL 60 PHE 61 -0.0514

PHE 61 ASN 62 0.0001

ASN 62 SER 63 -0.0572

SER 63 LYS 64 0.0002

LYS 64 GLU 65 0.0235

GLU 65 GLN 66 0.0003

GLN 66 GLY 67 0.0163

GLY 67 SER 68 0.0002

SER 68 TRP 69 -0.0133

TRP 69 GLY 70 0.0002

GLY 70 ARG 71 -0.0925

ARG 71 GLU 72 -0.0001

GLU 72 GLU 73 -0.0301

GLU 73 ARG 74 -0.0002

ARG 74 GLY 75 -0.0262

GLY 75 PRO 76 -0.0005

PRO 76 GLY 77 -0.0316

GLY 77 VAL 78 0.0004

VAL 78 PRO 79 0.0266

PRO 79 PHE 80 0.0003

PHE 80 GLN 81 -0.1844

GLN 81 ARG 82 0.0003

ARG 82 GLY 83 -0.0369

GLY 83 GLN 84 0.0004

GLN 84 PRO 85 -0.0327

PRO 85 PHE 86 0.0000

PHE 86 GLU 87 -0.2979

GLU 87 VAL 88 -0.0002

VAL 88 LEU 89 -0.2192

LEU 89 ILE 90 0.0003

ILE 90 ILE 91 -0.2183

ILE 91 ALA 92 0.0000

ALA 92 SER 93 -0.0560

SER 93 ASP 94 -0.0000

ASP 94 ASP 95 0.0430

ASP 95 GLY 96 -0.0001

GLY 96 PHE 97 -0.0223

PHE 97 LYS 98 -0.0001

LYS 98 ALA 99 -0.1382

ALA 99 VAL 100 0.0000

VAL 100 VAL 101 -0.1536

VAL 101 GLY 102 -0.0002

GLY 102 ASP 103 -0.2165

ASP 103 ALA 104 0.0000

ALA 104 GLN 105 0.1494

GLN 105 TYR 106 0.0003

TYR 106 HIS 107 -0.0284

HIS 107 HIS 108 -0.0001

HIS 108 PHE 109 0.0026

PHE 109 ARG 110 0.0006

ARG 110 HIS 111 -0.0711

HIS 111 ARG 112 0.0002

ARG 112 LEU 113 -0.0802

LEU 113 PRO 114 0.0001

PRO 114 LEU 115 0.0578

LEU 115 ALA 116 -0.0001

ALA 116 ARG 117 -0.0247

ARG 117 VAL 118 -0.0003

VAL 118 ARG 119 -0.0323

ARG 119 LEU 120 0.0002

LEU 120 VAL 121 0.0706

VAL 121 GLU 122 0.0002

GLU 122 VAL 123 0.1352

VAL 123 GLY 124 0.0003

GLY 124 GLY 125 0.0389

GLY 125 ASP 126 -0.0001

ASP 126 VAL 127 -0.1678

VAL 127 GLN 128 -0.0000

GLN 128 LEU 129 -0.0149

LEU 129 ASP 130 0.0002

ASP 130 SER 131 -0.0886

SER 131 VAL 132 -0.0002

VAL 132 ARG 133 -0.2525

ARG 133 ILE 134 -0.0002

ILE 134 PHE 135 -0.2017

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1bkz_dimer ***

CA strain for 240416190557731252

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1bkz_dimer *