Should you encounter any unexpected behaviour,
please let us know.

* 1bkz_dimer *

CA strain for 240416190557731252

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
SER 1 ASN 2 -0.0001

ASN 2 VAL 3 0.0106

VAL 3 PRO 4 0.0003

PRO 4 HIS 5 0.0183

HIS 5 LYS 6 0.0003

LYS 6 SER 7 0.0767

SER 7 SER 8 0.0001

SER 8 LEU 9 0.0824

LEU 9 PRO 10 -0.0000

PRO 10 GLU 11 0.0288

GLU 11 GLY 12 0.0002

GLY 12 ILE 13 0.0242

ILE 13 ARG 14 -0.0000

ARG 14 PRO 15 0.0904

PRO 15 GLY 16 0.0005

GLY 16 THR 17 0.0732

THR 17 VAL 18 0.0002

VAL 18 LEU 19 0.0502

LEU 19 ARG 20 0.0002

ARG 20 ILE 21 0.0866

ILE 21 ARG 22 0.0002

ARG 22 GLY 23 0.1032

GLY 23 LEU 24 0.0001

LEU 24 VAL 25 0.0356

VAL 25 PRO 26 0.0001

PRO 26 PRO 27 0.0142

PRO 27 ASN 28 -0.0002

ASN 28 ALA 29 0.0088

ALA 29 SER 30 -0.0003

SER 30 ARG 31 0.0106

ARG 31 PHE 32 0.0002

PHE 32 HIS 33 0.0241

HIS 33 VAL 34 0.0001

VAL 34 ASN 35 -0.0005

ASN 35 LEU 36 -0.0000

LEU 36 LEU 37 -0.0154

LEU 37 CYS 38 0.0004

CYS 38 GLY 39 0.0232

GLY 39 GLU 40 0.0002

GLU 40 GLU 41 -0.0439

GLU 41 GLN 42 -0.0000

GLN 42 GLY 43 0.0382

GLY 43 SER 44 0.0002

SER 44 ASP 45 0.0180

ASP 45 ALA 46 -0.0004

ALA 46 ALA 47 0.0314

ALA 47 LEU 48 -0.0002

LEU 48 HIS 49 0.0244

HIS 49 PHE 50 0.0001

PHE 50 ASN 51 0.0043

ASN 51 PRO 52 -0.0002

PRO 52 ARG 53 -0.0019

ARG 53 LEU 54 -0.0001

LEU 54 ASP 55 0.0050

ASP 55 THR 56 0.0003

THR 56 SER 57 -0.0061

SER 57 GLU 58 -0.0004

GLU 58 VAL 59 -0.0098

VAL 59 VAL 60 -0.0004

VAL 60 PHE 61 -0.0162

PHE 61 ASN 62 0.0002

ASN 62 SER 63 0.0286

SER 63 LYS 64 0.0002

LYS 64 GLU 65 0.0087

GLU 65 GLN 66 -0.0001

GLN 66 GLY 67 0.0076

GLY 67 SER 68 0.0001

SER 68 TRP 69 0.0213

TRP 69 GLY 70 0.0003

GLY 70 ARG 71 0.0073

ARG 71 GLU 72 0.0001

GLU 72 GLU 73 0.0450

GLU 73 ARG 74 -0.0003

ARG 74 GLY 75 0.0601

GLY 75 PRO 76 0.0001

PRO 76 GLY 77 -0.0279

GLY 77 VAL 78 0.0000

VAL 78 PRO 79 0.0308

PRO 79 PHE 80 0.0001

PHE 80 GLN 81 -0.0889

GLN 81 ARG 82 0.0001

ARG 82 GLY 83 -0.0048

GLY 83 GLN 84 -0.0001

GLN 84 PRO 85 0.0036

PRO 85 PHE 86 0.0003

PHE 86 GLU 87 -0.0418

GLU 87 VAL 88 -0.0001

VAL 88 LEU 89 -0.0559

LEU 89 ILE 90 -0.0001

ILE 90 ILE 91 -0.0157

ILE 91 ALA 92 0.0001

ALA 92 SER 93 0.0458

SER 93 ASP 94 0.0003

ASP 94 ASP 95 -0.1266

ASP 95 GLY 96 0.0001

GLY 96 PHE 97 0.0636

PHE 97 LYS 98 -0.0001

LYS 98 ALA 99 -0.0896

ALA 99 VAL 100 0.0004

VAL 100 VAL 101 -0.0610

VAL 101 GLY 102 -0.0001

GLY 102 ASP 103 -0.1124

ASP 103 ALA 104 0.0001

ALA 104 GLN 105 0.1933

GLN 105 TYR 106 0.0003

TYR 106 HIS 107 0.0797

HIS 107 HIS 108 -0.0001

HIS 108 PHE 109 0.0883

PHE 109 ARG 110 0.0001

ARG 110 HIS 111 0.0289

HIS 111 ARG 112 0.0001

ARG 112 LEU 113 0.0037

LEU 113 PRO 114 -0.0002

PRO 114 LEU 115 -0.0632

LEU 115 ALA 116 0.0001

ALA 116 ARG 117 -0.0035

ARG 117 VAL 118 -0.0003

VAL 118 ARG 119 0.0169

ARG 119 LEU 120 -0.0000

LEU 120 VAL 121 -0.0291

VAL 121 GLU 122 -0.0002

GLU 122 VAL 123 0.0184

VAL 123 GLY 124 -0.0000

GLY 124 GLY 125 0.0531

GLY 125 ASP 126 -0.0003

ASP 126 VAL 127 -0.0004

VAL 127 GLN 128 -0.0000

GLN 128 LEU 129 0.0478

LEU 129 ASP 130 0.0002

ASP 130 SER 131 0.1133

SER 131 VAL 132 -0.0002

VAL 132 ARG 133 0.0722

ARG 133 ILE 134 0.0003

ILE 134 PHE 135 0.0531

PHE 135 SER 1 -0.0513

SER 1 ASN 2 0.0001

ASN 2 VAL 3 0.0084

VAL 3 PRO 4 -0.0001

PRO 4 HIS 5 0.0032

HIS 5 LYS 6 -0.0001

LYS 6 SER 7 0.0705

SER 7 SER 8 0.0003

SER 8 LEU 9 0.0807

LEU 9 PRO 10 -0.0001

PRO 10 GLU 11 0.0666

GLU 11 GLY 12 0.0002

GLY 12 ILE 13 0.0668

ILE 13 ARG 14 -0.0004

ARG 14 PRO 15 0.0868

PRO 15 GLY 16 0.0002

GLY 16 THR 17 0.0773

THR 17 VAL 18 -0.0001

VAL 18 LEU 19 0.0522

LEU 19 ARG 20 0.0001

ARG 20 ILE 21 0.0985

ILE 21 ARG 22 0.0001

ARG 22 GLY 23 0.1334

GLY 23 LEU 24 0.0001

LEU 24 VAL 25 0.0392

VAL 25 PRO 26 0.0000

PRO 26 PRO 27 0.0198

PRO 27 ASN 28 0.0001

ASN 28 ALA 29 0.0037

ALA 29 SER 30 0.0000

SER 30 ARG 31 0.0064

ARG 31 PHE 32 -0.0001

PHE 32 HIS 33 0.0232

HIS 33 VAL 34 -0.0005

VAL 34 ASN 35 0.0044

ASN 35 LEU 36 -0.0002

LEU 36 LEU 37 -0.0089

LEU 37 CYS 38 0.0004

CYS 38 GLY 39 0.0282

GLY 39 GLU 40 0.0001

GLU 40 GLU 41 -0.0131

GLU 41 GLN 42 -0.0002

GLN 42 GLY 43 -0.0013

GLY 43 SER 44 -0.0004

SER 44 ASP 45 0.0200

ASP 45 ALA 46 -0.0000

ALA 46 ALA 47 0.0280

ALA 47 LEU 48 -0.0002

LEU 48 HIS 49 0.0181

HIS 49 PHE 50 -0.0001

PHE 50 ASN 51 0.0013

ASN 51 PRO 52 0.0002

PRO 52 ARG 53 0.0002

ARG 53 LEU 54 0.0002

LEU 54 ASP 55 0.0066

ASP 55 THR 56 0.0002

THR 56 SER 57 -0.0054

SER 57 GLU 58 -0.0001

GLU 58 VAL 59 -0.0119

VAL 59 VAL 60 -0.0001

VAL 60 PHE 61 -0.0233

PHE 61 ASN 62 0.0000

ASN 62 SER 63 0.0240

SER 63 LYS 64 -0.0005

LYS 64 GLU 65 0.0108

GLU 65 GLN 66 0.0001

GLN 66 GLY 67 0.0045

GLY 67 SER 68 0.0001

SER 68 TRP 69 0.0210

TRP 69 GLY 70 -0.0000

GLY 70 ARG 71 0.0190

ARG 71 GLU 72 -0.0002

GLU 72 GLU 73 0.0365

GLU 73 ARG 74 -0.0001

ARG 74 GLY 75 0.0529

GLY 75 PRO 76 0.0002

PRO 76 GLY 77 -0.0303

GLY 77 VAL 78 0.0002

VAL 78 PRO 79 0.0371

PRO 79 PHE 80 0.0000

PHE 80 GLN 81 -0.0817

GLN 81 ARG 82 -0.0000

ARG 82 GLY 83 -0.0131

GLY 83 GLN 84 0.0001

GLN 84 PRO 85 0.0089

PRO 85 PHE 86 -0.0001

PHE 86 GLU 87 -0.0184

GLU 87 VAL 88 0.0002

VAL 88 LEU 89 -0.0518

LEU 89 ILE 90 0.0002

ILE 90 ILE 91 -0.0105

ILE 91 ALA 92 0.0002

ALA 92 SER 93 0.0379

SER 93 ASP 94 -0.0004

ASP 94 ASP 95 -0.1484

ASP 95 GLY 96 0.0003

GLY 96 PHE 97 0.0536

PHE 97 LYS 98 -0.0002

LYS 98 ALA 99 -0.0877

ALA 99 VAL 100 0.0003

VAL 100 VAL 101 -0.0696

VAL 101 GLY 102 -0.0002

GLY 102 ASP 103 -0.1641

ASP 103 ALA 104 -0.0004

ALA 104 GLN 105 0.2398

GLN 105 TYR 106 -0.0002

TYR 106 HIS 107 0.0775

HIS 107 HIS 108 -0.0000

HIS 108 PHE 109 0.0880

PHE 109 ARG 110 -0.0003

ARG 110 HIS 111 0.0489

HIS 111 ARG 112 -0.0000

ARG 112 LEU 113 0.0034

LEU 113 PRO 114 0.0001

PRO 114 LEU 115 -0.0615

LEU 115 ALA 116 -0.0001

ALA 116 ARG 117 0.0147

ARG 117 VAL 118 -0.0004

VAL 118 ARG 119 0.0201

ARG 119 LEU 120 -0.0001

LEU 120 VAL 121 -0.0134

VAL 121 GLU 122 -0.0002

GLU 122 VAL 123 0.0211

VAL 123 GLY 124 0.0001

GLY 124 GLY 125 0.0552

GLY 125 ASP 126 -0.0001

ASP 126 VAL 127 0.0034

VAL 127 GLN 128 -0.0004

GLN 128 LEU 129 0.0685

LEU 129 ASP 130 -0.0006

ASP 130 SER 131 0.1397

SER 131 VAL 132 -0.0001

VAL 132 ARG 133 0.0903

ARG 133 ILE 134 0.0003

ILE 134 PHE 135 0.0421

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1bkz_dimer ***

CA strain for 240416190557731252

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1bkz_dimer *