Should you encounter any unexpected behaviour,
please let us know.

* 1bkz_dimer *

CA strain for 240416190557731252

--- normal mode 8 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
SER 1 ASN 2 0.0002

ASN 2 VAL 3 0.0110

VAL 3 PRO 4 -0.0002

PRO 4 HIS 5 -0.0384

HIS 5 LYS 6 0.0002

LYS 6 SER 7 -0.0252

SER 7 SER 8 -0.0001

SER 8 LEU 9 0.0007

LEU 9 PRO 10 -0.0001

PRO 10 GLU 11 -0.0268

GLU 11 GLY 12 0.0000

GLY 12 ILE 13 -0.0997

ILE 13 ARG 14 0.0002

ARG 14 PRO 15 0.0441

PRO 15 GLY 16 -0.0000

GLY 16 THR 17 -0.0015

THR 17 VAL 18 -0.0003

VAL 18 LEU 19 0.0254

LEU 19 ARG 20 0.0001

ARG 20 ILE 21 -0.0568

ILE 21 ARG 22 -0.0001

ARG 22 GLY 23 -0.0507

GLY 23 LEU 24 0.0001

LEU 24 VAL 25 -0.0315

VAL 25 PRO 26 -0.0002

PRO 26 PRO 27 -0.0038

PRO 27 ASN 28 -0.0002

ASN 28 ALA 29 -0.0074

ALA 29 SER 30 0.0003

SER 30 ARG 31 -0.0031

ARG 31 PHE 32 0.0000

PHE 32 HIS 33 -0.0235

HIS 33 VAL 34 0.0000

VAL 34 ASN 35 0.0045

ASN 35 LEU 36 0.0004

LEU 36 LEU 37 0.0141

LEU 37 CYS 38 0.0001

CYS 38 GLY 39 0.0265

GLY 39 GLU 40 0.0002

GLU 40 GLU 41 -0.0440

GLU 41 GLN 42 0.0001

GLN 42 GLY 43 0.0565

GLY 43 SER 44 0.0003

SER 44 ASP 45 0.0278

ASP 45 ALA 46 -0.0000

ALA 46 ALA 47 0.0325

ALA 47 LEU 48 0.0000

LEU 48 HIS 49 0.0049

HIS 49 PHE 50 -0.0000

PHE 50 ASN 51 0.0031

ASN 51 PRO 52 -0.0002

PRO 52 ARG 53 0.0057

ARG 53 LEU 54 0.0001

LEU 54 ASP 55 0.0177

ASP 55 THR 56 -0.0004

THR 56 SER 57 0.0344

SER 57 GLU 58 -0.0002

GLU 58 VAL 59 0.0160

VAL 59 VAL 60 0.0005

VAL 60 PHE 61 0.0044

PHE 61 ASN 62 0.0000

ASN 62 SER 63 0.0131

SER 63 LYS 64 0.0001

LYS 64 GLU 65 0.0051

GLU 65 GLN 66 0.0001

GLN 66 GLY 67 0.0140

GLY 67 SER 68 0.0002

SER 68 TRP 69 0.0192

TRP 69 GLY 70 0.0004

GLY 70 ARG 71 -0.0156

ARG 71 GLU 72 -0.0000

GLU 72 GLU 73 0.0397

GLU 73 ARG 74 0.0003

ARG 74 GLY 75 0.0474

GLY 75 PRO 76 -0.0001

PRO 76 GLY 77 -0.0092

GLY 77 VAL 78 0.0001

VAL 78 PRO 79 0.0562

PRO 79 PHE 80 -0.0004

PHE 80 GLN 81 0.0873

GLN 81 ARG 82 0.0003

ARG 82 GLY 83 -0.0094

GLY 83 GLN 84 0.0003

GLN 84 PRO 85 0.0101

PRO 85 PHE 86 -0.0004

PHE 86 GLU 87 0.0943

GLU 87 VAL 88 0.0002

VAL 88 LEU 89 0.0719

LEU 89 ILE 90 0.0000

ILE 90 ILE 91 0.1010

ILE 91 ALA 92 0.0002

ALA 92 SER 93 0.0370

SER 93 ASP 94 -0.0001

ASP 94 ASP 95 0.0131

ASP 95 GLY 96 0.0004

GLY 96 PHE 97 0.0139

PHE 97 LYS 98 0.0005

LYS 98 ALA 99 0.0832

ALA 99 VAL 100 0.0003

VAL 100 VAL 101 0.0792

VAL 101 GLY 102 0.0002

GLY 102 ASP 103 0.1945

ASP 103 ALA 104 0.0001

ALA 104 GLN 105 -0.0804

GLN 105 TYR 106 -0.0001

TYR 106 HIS 107 0.0221

HIS 107 HIS 108 0.0002

HIS 108 PHE 109 0.0245

PHE 109 ARG 110 0.0002

ARG 110 HIS 111 0.0021

HIS 111 ARG 112 -0.0000

ARG 112 LEU 113 -0.0199

LEU 113 PRO 114 0.0001

PRO 114 LEU 115 -0.0678

LEU 115 ALA 116 -0.0000

ALA 116 ARG 117 -0.0517

ARG 117 VAL 118 0.0002

VAL 118 ARG 119 0.0284

ARG 119 LEU 120 0.0001

LEU 120 VAL 121 -0.0039

VAL 121 GLU 122 0.0001

GLU 122 VAL 123 0.0095

VAL 123 GLY 124 0.0000

GLY 124 GLY 125 -0.0523

GLY 125 ASP 126 -0.0000

ASP 126 VAL 127 -0.0292

VAL 127 GLN 128 0.0000

GLN 128 LEU 129 -0.0741

LEU 129 ASP 130 -0.0002

ASP 130 SER 131 -0.0662

SER 131 VAL 132 0.0000

VAL 132 ARG 133 -0.2161

ARG 133 ILE 134 0.0001

ILE 134 PHE 135 -0.2622

PHE 135 SER 1 -0.0188

SER 1 ASN 2 -0.0003

ASN 2 VAL 3 0.0039

VAL 3 PRO 4 0.0003

PRO 4 HIS 5 0.0731

HIS 5 LYS 6 -0.0000

LYS 6 SER 7 0.0640

SER 7 SER 8 -0.0001

SER 8 LEU 9 0.0139

LEU 9 PRO 10 -0.0003

PRO 10 GLU 11 0.0407

GLU 11 GLY 12 -0.0002

GLY 12 ILE 13 0.0165

ILE 13 ARG 14 -0.0000

ARG 14 PRO 15 -0.0374

PRO 15 GLY 16 0.0001

GLY 16 THR 17 0.0219

THR 17 VAL 18 -0.0000

VAL 18 LEU 19 -0.0045

LEU 19 ARG 20 0.0002

ARG 20 ILE 21 0.0524

ILE 21 ARG 22 -0.0004

ARG 22 GLY 23 0.0434

GLY 23 LEU 24 0.0004

LEU 24 VAL 25 0.0178

VAL 25 PRO 26 -0.0002

PRO 26 PRO 27 0.0079

PRO 27 ASN 28 0.0001

ASN 28 ALA 29 0.0042

ALA 29 SER 30 -0.0003

SER 30 ARG 31 0.0023

ARG 31 PHE 32 0.0001

PHE 32 HIS 33 0.0313

HIS 33 VAL 34 0.0001

VAL 34 ASN 35 -0.0063

ASN 35 LEU 36 -0.0002

LEU 36 LEU 37 -0.0230

LEU 37 CYS 38 -0.0004

CYS 38 GLY 39 -0.0237

GLY 39 GLU 40 0.0002

GLU 40 GLU 41 0.0502

GLU 41 GLN 42 0.0001

GLN 42 GLY 43 -0.0404

GLY 43 SER 44 -0.0000

SER 44 ASP 45 -0.0318

ASP 45 ALA 46 0.0002

ALA 46 ALA 47 -0.0313

ALA 47 LEU 48 0.0002

LEU 48 HIS 49 0.0046

HIS 49 PHE 50 -0.0002

PHE 50 ASN 51 0.0048

ASN 51 PRO 52 0.0002

PRO 52 ARG 53 -0.0102

ARG 53 LEU 54 0.0001

LEU 54 ASP 55 -0.0218

ASP 55 THR 56 -0.0001

THR 56 SER 57 -0.0422

SER 57 GLU 58 -0.0006

GLU 58 VAL 59 -0.0127

VAL 59 VAL 60 -0.0000

VAL 60 PHE 61 0.0068

PHE 61 ASN 62 0.0002

ASN 62 SER 63 -0.0147

SER 63 LYS 64 -0.0001

LYS 64 GLU 65 -0.0090

GLU 65 GLN 66 0.0001

GLN 66 GLY 67 -0.0135

GLY 67 SER 68 -0.0002

SER 68 TRP 69 -0.0266

TRP 69 GLY 70 -0.0001

GLY 70 ARG 71 -0.0112

ARG 71 GLU 72 -0.0002

GLU 72 GLU 73 -0.0440

GLU 73 ARG 74 0.0002

ARG 74 GLY 75 -0.0438

GLY 75 PRO 76 0.0000

PRO 76 GLY 77 0.0167

GLY 77 VAL 78 -0.0001

VAL 78 PRO 79 -0.0660

PRO 79 PHE 80 -0.0002

PHE 80 GLN 81 -0.0677

GLN 81 ARG 82 0.0000

ARG 82 GLY 83 0.0105

GLY 83 GLN 84 0.0004

GLN 84 PRO 85 -0.0155

PRO 85 PHE 86 0.0001

PHE 86 GLU 87 -0.0988

GLU 87 VAL 88 -0.0002

VAL 88 LEU 89 -0.0601

LEU 89 ILE 90 0.0001

ILE 90 ILE 91 -0.0827

ILE 91 ALA 92 0.0003

ALA 92 SER 93 -0.0482

SER 93 ASP 94 0.0001

ASP 94 ASP 95 0.0617

ASP 95 GLY 96 0.0001

GLY 96 PHE 97 -0.0383

PHE 97 LYS 98 0.0001

LYS 98 ALA 99 -0.0669

ALA 99 VAL 100 0.0000

VAL 100 VAL 101 -0.0829

VAL 101 GLY 102 0.0001

GLY 102 ASP 103 -0.2078

ASP 103 ALA 104 -0.0000

ALA 104 GLN 105 0.0378

GLN 105 TYR 106 -0.0001

TYR 106 HIS 107 -0.0305

HIS 107 HIS 108 -0.0001

HIS 108 PHE 109 -0.0460

PHE 109 ARG 110 0.0000

ARG 110 HIS 111 -0.0004

HIS 111 ARG 112 -0.0001

ARG 112 LEU 113 0.0115

LEU 113 PRO 114 -0.0000

PRO 114 LEU 115 0.0882

LEU 115 ALA 116 -0.0000

ALA 116 ARG 117 0.0529

ARG 117 VAL 118 0.0001

VAL 118 ARG 119 -0.0319

ARG 119 LEU 120 -0.0000

LEU 120 VAL 121 -0.0047

VAL 121 GLU 122 0.0000

GLU 122 VAL 123 -0.0146

VAL 123 GLY 124 0.0004

GLY 124 GLY 125 0.0601

GLY 125 ASP 126 -0.0000

ASP 126 VAL 127 0.0322

VAL 127 GLN 128 -0.0003

GLN 128 LEU 129 0.0680

LEU 129 ASP 130 0.0002

ASP 130 SER 131 0.0794

SER 131 VAL 132 0.0002

VAL 132 ARG 133 0.2371

ARG 133 ILE 134 0.0001

ILE 134 PHE 135 0.3080

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1bkz_dimer ***

CA strain for 240416190557731252

--- normal mode 8 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1bkz_dimer *