Should you encounter any unexpected behaviour,
please let us know.

* 1bkz_dimer *

CA strain for 240416190557731252

--- normal mode 9 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
SER 1 ASN 2 -0.0001

ASN 2 VAL 3 -0.0178

VAL 3 PRO 4 -0.0002

PRO 4 HIS 5 -0.0058

HIS 5 LYS 6 -0.0000

LYS 6 SER 7 -0.0644

SER 7 SER 8 -0.0003

SER 8 LEU 9 -0.0510

LEU 9 PRO 10 0.0001

PRO 10 GLU 11 -0.0117

GLU 11 GLY 12 0.0002

GLY 12 ILE 13 -0.0768

ILE 13 ARG 14 0.0002

ARG 14 PRO 15 -0.0347

PRO 15 GLY 16 0.0003

GLY 16 THR 17 -0.0361

THR 17 VAL 18 -0.0000

VAL 18 LEU 19 -0.0027

LEU 19 ARG 20 0.0000

ARG 20 ILE 21 0.1190

ILE 21 ARG 22 -0.0003

ARG 22 GLY 23 0.2419

GLY 23 LEU 24 0.0001

LEU 24 VAL 25 0.0492

VAL 25 PRO 26 -0.0001

PRO 26 PRO 27 0.0097

PRO 27 ASN 28 0.0002

ASN 28 ALA 29 -0.0378

ALA 29 SER 30 -0.0002

SER 30 ARG 31 -0.0266

ARG 31 PHE 32 0.0003

PHE 32 HIS 33 -0.0679

HIS 33 VAL 34 -0.0001

VAL 34 ASN 35 0.0031

ASN 35 LEU 36 0.0002

LEU 36 LEU 37 0.0283

LEU 37 CYS 38 0.0000

CYS 38 GLY 39 -0.0054

GLY 39 GLU 40 0.0001

GLU 40 GLU 41 0.0367

GLU 41 GLN 42 0.0002

GLN 42 GLY 43 -0.0306

GLY 43 SER 44 -0.0001

SER 44 ASP 45 -0.0161

ASP 45 ALA 46 0.0004

ALA 46 ALA 47 -0.0323

ALA 47 LEU 48 0.0002

LEU 48 HIS 49 -0.0834

HIS 49 PHE 50 -0.0003

PHE 50 ASN 51 -0.0343

ASN 51 PRO 52 -0.0004

PRO 52 ARG 53 0.0266

ARG 53 LEU 54 0.0002

LEU 54 ASP 55 0.0418

ASP 55 THR 56 0.0004

THR 56 SER 57 0.0491

SER 57 GLU 58 -0.0002

GLU 58 VAL 59 0.0131

VAL 59 VAL 60 0.0002

VAL 60 PHE 61 -0.0535

PHE 61 ASN 62 0.0001

ASN 62 SER 63 0.0096

SER 63 LYS 64 0.0001

LYS 64 GLU 65 0.0289

GLU 65 GLN 66 -0.0002

GLN 66 GLY 67 -0.0113

GLY 67 SER 68 0.0000

SER 68 TRP 69 0.0165

TRP 69 GLY 70 0.0003

GLY 70 ARG 71 0.0155

ARG 71 GLU 72 0.0000

GLU 72 GLU 73 0.0258

GLU 73 ARG 74 0.0001

ARG 74 GLY 75 0.0589

GLY 75 PRO 76 -0.0001

PRO 76 GLY 77 -0.0129

GLY 77 VAL 78 -0.0002

VAL 78 PRO 79 0.0767

PRO 79 PHE 80 -0.0001

PHE 80 GLN 81 0.0898

GLN 81 ARG 82 0.0002

ARG 82 GLY 83 -0.0239

GLY 83 GLN 84 -0.0002

GLN 84 PRO 85 0.0535

PRO 85 PHE 86 -0.0001

PHE 86 GLU 87 0.2493

GLU 87 VAL 88 0.0005

VAL 88 LEU 89 0.0680

LEU 89 ILE 90 0.0001

ILE 90 ILE 91 -0.0388

ILE 91 ALA 92 0.0003

ALA 92 SER 93 0.0490

SER 93 ASP 94 0.0000

ASP 94 ASP 95 -0.1248

ASP 95 GLY 96 -0.0001

GLY 96 PHE 97 0.0177

PHE 97 LYS 98 -0.0000

LYS 98 ALA 99 0.0140

ALA 99 VAL 100 0.0001

VAL 100 VAL 101 0.0541

VAL 101 GLY 102 -0.0004

GLY 102 ASP 103 0.2767

ASP 103 ALA 104 0.0002

ALA 104 GLN 105 0.0289

GLN 105 TYR 106 0.0002

TYR 106 HIS 107 0.0368

HIS 107 HIS 108 0.0001

HIS 108 PHE 109 0.0512

PHE 109 ARG 110 0.0001

ARG 110 HIS 111 0.0479

HIS 111 ARG 112 -0.0001

ARG 112 LEU 113 0.0616

LEU 113 PRO 114 0.0000

PRO 114 LEU 115 -0.0564

LEU 115 ALA 116 -0.0001

ALA 116 ARG 117 -0.0938

ARG 117 VAL 118 0.0000

VAL 118 ARG 119 0.0086

ARG 119 LEU 120 -0.0001

LEU 120 VAL 121 0.0173

VAL 121 GLU 122 0.0002

GLU 122 VAL 123 -0.0305

VAL 123 GLY 124 0.0001

GLY 124 GLY 125 -0.0764

GLY 125 ASP 126 -0.0004

ASP 126 VAL 127 0.0975

VAL 127 GLN 128 0.0003

GLN 128 LEU 129 0.0586

LEU 129 ASP 130 -0.0001

ASP 130 SER 131 0.0555

SER 131 VAL 132 0.0001

VAL 132 ARG 133 0.0911

ARG 133 ILE 134 -0.0001

ILE 134 PHE 135 0.0194

PHE 135 SER 1 0.0890

SER 1 ASN 2 0.0002

ASN 2 VAL 3 -0.0030

VAL 3 PRO 4 -0.0000

PRO 4 HIS 5 0.0682

HIS 5 LYS 6 0.0002

LYS 6 SER 7 -0.0392

SER 7 SER 8 -0.0001

SER 8 LEU 9 -0.0514

LEU 9 PRO 10 0.0001

PRO 10 GLU 11 -0.0276

GLU 11 GLY 12 0.0003

GLY 12 ILE 13 -0.0172

ILE 13 ARG 14 0.0002

ARG 14 PRO 15 -0.0477

PRO 15 GLY 16 0.0002

GLY 16 THR 17 -0.0332

THR 17 VAL 18 -0.0000

VAL 18 LEU 19 0.0025

LEU 19 ARG 20 0.0001

ARG 20 ILE 21 0.1027

ILE 21 ARG 22 -0.0003

ARG 22 GLY 23 0.2551

GLY 23 LEU 24 0.0002

LEU 24 VAL 25 0.0413

VAL 25 PRO 26 -0.0002

PRO 26 PRO 27 -0.0090

PRO 27 ASN 28 -0.0002

ASN 28 ALA 29 -0.0240

ALA 29 SER 30 0.0002

SER 30 ARG 31 -0.0193

ARG 31 PHE 32 0.0004

PHE 32 HIS 33 -0.0586

HIS 33 VAL 34 0.0002

VAL 34 ASN 35 -0.0046

ASN 35 LEU 36 0.0004

LEU 36 LEU 37 0.0242

LEU 37 CYS 38 0.0004

CYS 38 GLY 39 -0.0202

GLY 39 GLU 40 -0.0002

GLU 40 GLU 41 0.0050

GLU 41 GLN 42 0.0002

GLN 42 GLY 43 -0.0005

GLY 43 SER 44 0.0000

SER 44 ASP 45 -0.0149

ASP 45 ALA 46 0.0001

ALA 46 ALA 47 -0.0412

ALA 47 LEU 48 -0.0002

LEU 48 HIS 49 -0.0842

HIS 49 PHE 50 -0.0000

PHE 50 ASN 51 -0.0257

ASN 51 PRO 52 -0.0001

PRO 52 ARG 53 0.0313

ARG 53 LEU 54 -0.0001

LEU 54 ASP 55 0.0370

ASP 55 THR 56 -0.0000

THR 56 SER 57 0.0433

SER 57 GLU 58 -0.0001

GLU 58 VAL 59 0.0110

VAL 59 VAL 60 0.0004

VAL 60 PHE 61 -0.0509

PHE 61 ASN 62 0.0002

ASN 62 SER 63 0.0233

SER 63 LYS 64 -0.0000

LYS 64 GLU 65 0.0303

GLU 65 GLN 66 0.0001

GLN 66 GLY 67 -0.0169

GLY 67 SER 68 -0.0004

SER 68 TRP 69 0.0167

TRP 69 GLY 70 0.0001

GLY 70 ARG 71 0.0307

ARG 71 GLU 72 0.0000

GLU 72 GLU 73 0.0215

GLU 73 ARG 74 0.0003

ARG 74 GLY 75 0.0511

GLY 75 PRO 76 -0.0003

PRO 76 GLY 77 -0.0082

GLY 77 VAL 78 0.0002

VAL 78 PRO 79 0.0740

PRO 79 PHE 80 -0.0003

PHE 80 GLN 81 0.0870

GLN 81 ARG 82 0.0001

ARG 82 GLY 83 -0.0118

GLY 83 GLN 84 0.0000

GLN 84 PRO 85 0.0401

PRO 85 PHE 86 -0.0000

PHE 86 GLU 87 0.2729

GLU 87 VAL 88 -0.0002

VAL 88 LEU 89 0.0816

LEU 89 ILE 90 -0.0004

ILE 90 ILE 91 -0.0305

ILE 91 ALA 92 -0.0000

ALA 92 SER 93 0.0540

SER 93 ASP 94 -0.0004

ASP 94 ASP 95 -0.0760

ASP 95 GLY 96 0.0001

GLY 96 PHE 97 -0.0183

PHE 97 LYS 98 -0.0001

LYS 98 ALA 99 0.0357

ALA 99 VAL 100 -0.0004

VAL 100 VAL 101 0.0711

VAL 101 GLY 102 -0.0000

GLY 102 ASP 103 0.2672

ASP 103 ALA 104 0.0003

ALA 104 GLN 105 0.0633

GLN 105 TYR 106 0.0000

TYR 106 HIS 107 0.0272

HIS 107 HIS 108 0.0000

HIS 108 PHE 109 0.0401

PHE 109 ARG 110 0.0001

ARG 110 HIS 111 0.0937

HIS 111 ARG 112 -0.0001

ARG 112 LEU 113 0.0698

LEU 113 PRO 114 -0.0004

PRO 114 LEU 115 -0.0617

LEU 115 ALA 116 0.0001

ALA 116 ARG 117 -0.0880

ARG 117 VAL 118 -0.0004

VAL 118 ARG 119 0.0082

ARG 119 LEU 120 -0.0002

LEU 120 VAL 121 0.0041

VAL 121 GLU 122 -0.0002

GLU 122 VAL 123 -0.0390

VAL 123 GLY 124 0.0001

GLY 124 GLY 125 -0.0673

GLY 125 ASP 126 -0.0001

ASP 126 VAL 127 0.1131

VAL 127 GLN 128 -0.0001

GLN 128 LEU 129 0.0263

LEU 129 ASP 130 0.0004

ASP 130 SER 131 0.0461

SER 131 VAL 132 -0.0000

VAL 132 ARG 133 0.1488

ARG 133 ILE 134 0.0002

ILE 134 PHE 135 0.0743

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** 1bkz_dimer ***

CA strain for 240416190557731252

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.

* 1bkz_dimer *