CNRS Nantes University US2B US2B
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***  1bkz_monomerB_OPT  ***

CA strain for 240416193437756903

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1ASN 2 0.0291
ASN 2VAL 3 0.0584
VAL 3PRO 4 -0.0800
PRO 4HIS 5 0.3145
HIS 5LYS 6 -0.0439
LYS 6SER 7 -0.0400
SER 7SER 8 0.0103
SER 8LEU 9 -0.0044
LEU 9PRO 10 -0.0229
PRO 10GLU 11 0.0064
GLU 11GLY 12 0.0849
GLY 12ILE 13 -0.0408
ILE 13ARG 14 0.0075
ARG 14PRO 15 -0.0253
PRO 15GLY 16 0.0513
GLY 16THR 17 0.0320
THR 17VAL 18 -0.0465
VAL 18LEU 19 0.0137
LEU 19ARG 20 -0.0328
ARG 20ILE 21 0.0241
ILE 21ARG 22 -0.0551
ARG 22GLY 23 -0.0523
GLY 23LEU 24 -0.0612
LEU 24VAL 25 -0.0407
VAL 25PRO 26 -0.0209
PRO 26PRO 27 0.0925
PRO 27ASN 28 -0.0406
ASN 28ALA 29 0.0468
ALA 29SER 30 -0.1008
SER 30ARG 31 0.0569
ARG 31PHE 32 0.0618
PHE 32HIS 33 0.1162
HIS 33VAL 34 0.1181
VAL 34ASN 35 0.0368
ASN 35LEU 36 0.0182
LEU 36LEU 37 -0.0005
LEU 37CYS 38 -0.0527
CYS 38GLY 39 0.0076
GLY 39GLU 40 -0.0881
GLU 40GLU 41 0.0672
GLU 41GLN 42 0.0635
GLN 42GLY 43 -0.0891
GLY 43SER 44 0.0384
SER 44ASP 45 0.0341
ASP 45ALA 46 0.0211
ALA 46ALA 47 -0.0159
ALA 47LEU 48 0.0568
LEU 48HIS 49 0.0895
HIS 49PHE 50 0.0599
PHE 50ASN 51 0.0989
ASN 51PRO 52 0.0591
PRO 52ARG 53 -0.0200
ARG 53LEU 54 0.0211
LEU 54ASP 55 -0.0533
ASP 55THR 56 0.0134
THR 56SER 57 -0.0814
SER 57GLU 58 0.0183
GLU 58VAL 59 -0.0621
VAL 59VAL 60 0.0928
VAL 60PHE 61 -0.0013
PHE 61ASN 62 0.1242
ASN 62SER 63 0.1167
SER 63LYS 64 0.0370
LYS 64GLU 65 0.0703
GLU 65GLN 66 0.1005
GLN 66GLY 67 -0.1158
GLY 67SER 68 -0.0532
SER 68TRP 69 0.1338
TRP 69GLY 70 -0.0758
GLY 70ARG 71 0.0170
ARG 71GLU 72 0.0059
GLU 72GLU 73 0.0862
GLU 73ARG 74 0.0764
ARG 74GLY 75 0.0492
GLY 75PRO 76 0.0613
PRO 76GLY 77 -0.1171
GLY 77VAL 78 0.0872
VAL 78PRO 79 -0.1641
PRO 79PHE 80 -0.0125
PHE 80GLN 81 -0.1136
GLN 81ARG 82 -0.0487
ARG 82GLY 83 -0.0113
GLY 83GLN 84 -0.0536
GLN 84PRO 85 -0.1180
PRO 85PHE 86 0.0345
PHE 86GLU 87 -0.1717
GLU 87VAL 88 0.0065
VAL 88LEU 89 -0.0476
LEU 89ILE 90 0.0102
ILE 90ILE 91 0.0079
ILE 91ALA 92 -0.0418
ALA 92SER 93 0.0468
SER 93ASP 94 0.0007
ASP 94ASP 95 -0.0060
ASP 95GLY 96 -0.0008
GLY 96PHE 97 0.0012
PHE 97LYS 98 -0.0287
LYS 98ALA 99 -0.0600
ALA 99VAL 100 0.0686
VAL 100VAL 101 -0.1006
VAL 101GLY 102 0.0393
GLY 102ASP 103 -0.0335
ASP 103ALA 104 0.0294
ALA 104GLN 105 0.0337
GLN 105TYR 106 -0.1340
TYR 106HIS 107 0.0916
HIS 107HIS 108 -0.1464
HIS 108PHE 109 0.0966
PHE 109ARG 110 -0.0396
ARG 110HIS 111 -0.0193
HIS 111ARG 112 0.0817
ARG 112LEU 113 -0.0057
LEU 113PRO 114 0.0249
PRO 114LEU 115 0.0379
LEU 115ALA 116 -0.0327
ALA 116ARG 117 0.0322
ARG 117VAL 118 -0.0139
VAL 118ARG 119 0.0087
ARG 119LEU 120 -0.0041
LEU 120VAL 121 0.0054
VAL 121GLU 122 -0.0473
GLU 122VAL 123 0.0767
VAL 123GLY 124 0.0652
GLY 124GLY 125 0.1392
GLY 125ASP 126 0.2257
ASP 126VAL 127 -0.0456
VAL 127GLN 128 -0.0795
GLN 128LEU 129 0.0431
LEU 129ASP 130 0.0016
ASP 130SER 131 -0.0384
SER 131VAL 132 -0.1202
VAL 132ARG 133 0.0871
ARG 133ILE 134 -0.0182
ILE 134PHE 135 -0.0327

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.