This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
ASN 2
-0.1321
ASN 2
VAL 3
-0.0993
VAL 3
PRO 4
0.0590
PRO 4
HIS 5
0.0598
HIS 5
LYS 6
0.0332
LYS 6
SER 7
0.0474
SER 7
SER 8
-0.0380
SER 8
LEU 9
0.0741
LEU 9
PRO 10
-0.0353
PRO 10
GLU 11
0.0442
GLU 11
GLY 12
0.0626
GLY 12
ILE 13
0.0355
ILE 13
ARG 14
0.0990
ARG 14
PRO 15
0.1063
PRO 15
GLY 16
-0.0937
GLY 16
THR 17
0.1060
THR 17
VAL 18
-0.2021
VAL 18
LEU 19
0.0354
LEU 19
ARG 20
-0.1408
ARG 20
ILE 21
-0.0610
ILE 21
ARG 22
-0.0465
ARG 22
GLY 23
-0.1667
GLY 23
LEU 24
-0.1494
LEU 24
VAL 25
-0.0485
VAL 25
PRO 26
-0.0985
PRO 26
PRO 27
0.0969
PRO 27
ASN 28
-0.0219
ASN 28
ALA 29
0.0929
ALA 29
SER 30
0.0578
SER 30
ARG 31
0.0839
ARG 31
PHE 32
-0.0435
PHE 32
HIS 33
0.2603
HIS 33
VAL 34
0.0173
VAL 34
ASN 35
0.1535
ASN 35
LEU 36
0.0927
LEU 36
LEU 37
-0.0096
LEU 37
CYS 38
0.0985
CYS 38
GLY 39
0.0834
GLY 39
GLU 40
0.0761
GLU 40
GLU 41
0.0659
GLU 41
GLN 42
0.0785
GLN 42
GLY 43
-0.1936
GLY 43
SER 44
-0.0700
SER 44
ASP 45
-0.0359
ASP 45
ALA 46
0.0860
ALA 46
ALA 47
-0.0454
ALA 47
LEU 48
0.0737
LEU 48
HIS 49
0.1232
HIS 49
PHE 50
0.1809
PHE 50
ASN 51
0.0886
ASN 51
PRO 52
0.1535
PRO 52
ARG 53
-0.0079
ARG 53
LEU 54
0.2126
LEU 54
ASP 55
-0.0311
ASP 55
THR 56
0.0646
THR 56
SER 57
-0.0452
SER 57
GLU 58
0.0212
GLU 58
VAL 59
0.0021
VAL 59
VAL 60
0.0713
VAL 60
PHE 61
0.1275
PHE 61
ASN 62
-0.0053
ASN 62
SER 63
0.0816
SER 63
LYS 64
-0.1249
LYS 64
GLU 65
0.0440
GLU 65
GLN 66
-0.0867
GLN 66
GLY 67
0.1845
GLY 67
SER 68
-0.0620
SER 68
TRP 69
0.0539
TRP 69
GLY 70
-0.0974
GLY 70
ARG 71
-0.1973
ARG 71
GLU 72
0.1718
GLU 72
GLU 73
-0.0312
GLU 73
ARG 74
-0.0551
ARG 74
GLY 75
0.0131
GLY 75
PRO 76
-0.0681
PRO 76
GLY 77
-0.0186
GLY 77
VAL 78
-0.0421
VAL 78
PRO 79
0.0166
PRO 79
PHE 80
-0.1751
PHE 80
GLN 81
-0.1714
GLN 81
ARG 82
-0.1340
ARG 82
GLY 83
0.0549
GLY 83
GLN 84
-0.0875
GLN 84
PRO 85
-0.1172
PRO 85
PHE 86
-0.1295
PHE 86
GLU 87
-0.3094
GLU 87
VAL 88
-0.0221
VAL 88
LEU 89
-0.1458
LEU 89
ILE 90
-0.0355
ILE 90
ILE 91
-0.0018
ILE 91
ALA 92
-0.0967
ALA 92
SER 93
0.0169
SER 93
ASP 94
-0.0805
ASP 94
ASP 95
0.0797
ASP 95
GLY 96
0.0010
GLY 96
PHE 97
-0.0057
PHE 97
LYS 98
-0.0711
LYS 98
ALA 99
-0.0393
ALA 99
VAL 100
-0.0284
VAL 100
VAL 101
-0.1610
VAL 101
GLY 102
0.0406
GLY 102
ASP 103
-0.0849
ASP 103
ALA 104
0.0450
ALA 104
GLN 105
-0.1106
GLN 105
TYR 106
0.0013
TYR 106
HIS 107
-0.1323
HIS 107
HIS 108
-0.0315
HIS 108
PHE 109
-0.1283
PHE 109
ARG 110
0.0236
ARG 110
HIS 111
0.0026
HIS 111
ARG 112
-0.1319
ARG 112
LEU 113
0.1623
LEU 113
PRO 114
0.0271
PRO 114
LEU 115
-0.1913
LEU 115
ALA 116
0.0983
ALA 116
ARG 117
-0.1200
ARG 117
VAL 118
-0.0691
VAL 118
ARG 119
0.0480
ARG 119
LEU 120
-0.0293
LEU 120
VAL 121
0.0132
VAL 121
GLU 122
0.0167
GLU 122
VAL 123
0.1255
VAL 123
GLY 124
-0.0353
GLY 124
GLY 125
-0.0064
GLY 125
ASP 126
0.2484
ASP 126
VAL 127
-0.2390
VAL 127
GLN 128
0.0651
GLN 128
LEU 129
-0.0426
LEU 129
ASP 130
0.0263
ASP 130
SER 131
-0.1051
SER 131
VAL 132
-0.0400
VAL 132
ARG 133
0.0364
ARG 133
ILE 134
-0.1582
ILE 134
PHE 135
0.0736
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.