CNRS Nantes University US2B US2B
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***  vegf  ***

<R2> analysis for 240125104642330507

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0615
GLU 10.0198
VAL 20.0180
VAL 30.0174
LYS 40.0174
PHE 50.0158
MET 60.0166
ASP 70.0171
VAL 80.0153
TYR 90.0144
GLN 100.0152
ARG 110.0138
SER 120.0128
TYR 130.0121
CYX 140.0103
HID 150.0088
PRO 160.0065
ILE 170.0062
GLU 180.0034
THR 190.0027
LEU 200.0021
VAL 210.0018
ASP 220.0012
ILE 230.0025
PHE 240.0020
GLN 250.0038
GLU 260.0049
TYR 270.0059
PRO 280.0065
ASP 290.0049
GLU 300.0066
ILE 310.0069
GLU 320.0088
TYR 330.0085
ILE 340.0074
PHE 350.0067
LYS 360.0078
PRO 370.0063
SER 380.0042
CYX 390.0023
VAL 400.0025
PRO 410.0011
LEU 420.0028
MET 430.0040
ARG 440.0053
CYX 450.0065
GLY 460.0077
GLY 470.0105
CYX 480.0112
CYX 490.0117
ASN 500.0127
ASP 510.0111
GLU 520.0105
GLY 530.0111
LEU 540.0111
GLU 550.0110
CYX 560.0097
VAL 570.0079
PRO 580.0064
THR 590.0081
GLU 600.0078
GLU 610.0072
SER 620.0069
ASN 630.0082
ILE 640.0074
THR 650.0095
MET 660.0083
GLN 670.0105
ILE 680.0091
MET 690.0105
ARG 700.0100
ILE 710.0105
LYS 720.0107
PRO 730.0104
HIE 740.0110
GLN 750.0124
GLY 760.0141
GLN 770.0137
HIE 780.0140
ILE 790.0132
GLY 800.0132
GLU 810.0120
MET 820.0097
SER 830.0088
PHE 840.0067
LEU 850.0066
GLN 860.0058
HIE 870.0055
ASN 880.0069
LYS 890.0081
CYX 900.0084
GLU 910.0088
CYX 920.0107
ARG 930.0112
PRO 940.0110
LYS 950.0124
LYS 960.0128
ASP 970.0100
ARG 980.0105
ALA 990.0149
ARG 1000.0126
GLN 1010.0135
GLU 1020.0082
ASN 1030.0073
PRO 1040.0042
CYX 1050.0032
GLY 1060.0026
PRO 1070.0074
CYX 1080.0074
SER 1090.0127
GLU 1100.0111
ARG 1110.0062
ARG 1120.0029
LYS 1130.0048
HIE 1140.0059
LEU 1150.0155
PHE 1160.0184
VAL 1170.0273
GLN 1180.0267
ASP 1190.0392
PRO 1200.0440
GLN 1210.0580
THR 1220.0615
CYX 1230.0503
LYS 1240.0437
CYX 1250.0282
SER 1260.0306
CYX 1270.0388
LYS 1280.0345
ASN 1290.0250
THR 1300.0172
ASP 1310.0131
SER 1320.0191
ARG 1330.0184
CYX 1340.0141
LYS 1350.0170
ALA 1360.0233
ARG 1370.0223
GLN 1380.0186
LEU 1390.0127
GLU 1400.0065
LEU 1410.0019
ASN 1420.0035
GLU 1430.0059
ARG 1440.0083
THR 1450.0057
CYX 1460.0013
ARG 1470.0044
CYX 1480.0086
ASP 1490.0101
LYS 1500.0119
PRO 1510.0102
ARG 1520.0110
ARG 1530.0125
GLU 1540.0162
VAL 1550.0123
VAL 1560.0096
LYS 1570.0112
PHE 1580.0107
MET 1590.0110
ASP 1600.0090
VAL 1610.0069
TYR 1620.0079
GLN 1630.0085
ARG 1640.0059
SER 1650.0049
TYR 1660.0072
CYX 1670.0062
HIE 1680.0037
PRO 1690.0048
ILE 1700.0046
GLU 1710.0087
THR 1720.0090
LEU 1730.0111
VAL 1740.0108
ASP 1750.0117
ILE 1760.0115
PHE 1770.0112
GLN 1780.0113
GLU 1790.0112
TYR 1800.0109
PRO 1810.0112
ASP 1820.0101
GLU 1830.0100
ILE 1840.0097
GLU 1850.0079
TYR 1860.0067
ILE 1870.0081
PHE 1880.0101
LYS 1890.0116
PRO 1900.0125
SER 1910.0117
CYX 1920.0122
VAL 1930.0128
PRO 1940.0126
LEU 1950.0108
MET 1960.0088
ARG 1970.0073
CYX 1980.0060
GLY 1990.0052
GLY 2000.0040
CYX 2010.0060
CYX 2020.0088
ASN 2030.0080
ASP 2040.0096
GLU 2050.0091
GLY 2060.0114
LEU 2070.0130
GLU 2080.0119
CYX 2090.0103
VAL 2100.0120
PRO 2110.0098
THR 2120.0102
GLU 2130.0083
GLU 2140.0104
SER 2150.0124
ASN 2160.0143
ILE 2170.0148
THR 2180.0156
MET 2190.0152
GLN 2200.0152
ILE 2210.0131
MET 2220.0116
ARG 2230.0079
ILE 2240.0058
LYS 2250.0018
PRO 2260.0092
HIE 2270.0183
GLN 2280.0107
GLY 2290.0069
GLN 2300.0066
HIE 2310.0071
ILE 2320.0113
GLY 2330.0125
GLU 2340.0132
MET 2350.0137
SER 2360.0138
PHE 2370.0135
LEU 2380.0117
GLN 2390.0107
HIE 2400.0085
ASN 2410.0067
LYS 2420.0051
CYX 2430.0072
GLU 2440.0106
CYX 2450.0125
ARG 2460.0164
PRO 2470.0179
LYS 2480.0160
LYS 2490.0201
ASP 2500.0153
ARG 2510.0161
ALA 2520.0203
ARG 2530.0207
GLN 2540.0257
GLU 2550.0243
ASN 2560.0174
PRO 2570.0153
CYX 2580.0111
GLY 2590.0084
PRO 2600.0072
CYX 2610.0072
SER 2620.0060
GLU 2630.0061
ARG 2640.0067
ARG 2650.0072
LYS 2660.0069
HIE 2670.0057
LEU 2680.0055
PHE 2690.0074
VAL 2700.0092
GLN 2710.0119
ASP 2720.0169
PRO 2730.0185
GLN 2740.0235
THR 2750.0217
CYX 2760.0177
LYS 2770.0140
CYX 2780.0094
SER 2790.0105
CYX 2800.0081
LYS 2810.0074
ASN 2820.0082
THR 2830.0125
ASP 2840.0146
SER 2850.0192
ARG 2860.0170
CYX 2870.0131
LYS 2880.0168
ALA 2890.0198
ARG 2900.0168
GLN 2910.0138
LEU 2920.0092
GLU 2930.0052
LEU 2940.0056
ASN 2950.0056
GLU 2960.0084
ARG 2970.0081
THR 2980.0062
CYX 2990.0056
ARG 3000.0028
CYX 3010.0046
ASP 3020.0060
LYS 3030.0089
PRO 3040.0062
ARG 3050.0109
ARG 3060.0109

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.