CNRS Nantes University US2B US2B
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***  vegf  ***

<R2> analysis for 240125104642330507

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0346
GLU 10.0193
VAL 20.0168
VAL 30.0143
LYS 40.0153
PHE 50.0133
MET 60.0137
ASP 70.0125
VAL 80.0091
TYR 90.0089
GLN 100.0105
ARG 110.0065
SER 120.0056
TYR 130.0067
CYX 140.0070
HID 150.0054
PRO 160.0041
ILE 170.0035
GLU 180.0050
THR 190.0054
LEU 200.0060
VAL 210.0049
ASP 220.0049
ILE 230.0061
PHE 240.0051
GLN 250.0048
GLU 260.0062
TYR 270.0072
PRO 280.0070
ASP 290.0071
GLU 300.0086
ILE 310.0085
GLU 320.0100
TYR 330.0095
ILE 340.0079
PHE 350.0087
LYS 360.0097
PRO 370.0093
SER 380.0069
CYX 390.0067
VAL 400.0077
PRO 410.0075
LEU 420.0061
MET 430.0045
ARG 440.0042
CYX 450.0051
GLY 460.0042
GLY 470.0033
CYX 480.0038
CYX 490.0069
ASN 500.0085
ASP 510.0097
GLU 520.0066
GLY 530.0075
LEU 540.0092
GLU 550.0084
CYX 560.0082
VAL 570.0096
PRO 580.0091
THR 590.0108
GLU 600.0084
GLU 610.0066
SER 620.0062
ASN 630.0081
ILE 640.0094
THR 650.0120
MET 660.0122
GLN 670.0141
ILE 680.0123
MET 690.0126
ARG 700.0118
ILE 710.0108
LYS 720.0104
PRO 730.0079
HIE 740.0066
GLN 750.0099
GLY 760.0127
GLN 770.0135
HIE 780.0153
ILE 790.0155
GLY 800.0159
GLU 810.0149
MET 820.0124
SER 830.0110
PHE 840.0083
LEU 850.0070
GLN 860.0053
HIE 870.0050
ASN 880.0045
LYS 890.0070
CYX 900.0086
GLU 910.0119
CYX 920.0119
ARG 930.0140
PRO 940.0139
LYS 950.0119
LYS 960.0142
ASP 970.0100
ARG 980.0112
ALA 990.0171
ARG 1000.0159
GLN 1010.0154
GLU 1020.0089
ASN 1030.0055
PRO 1040.0019
CYX 1050.0072
GLY 1060.0093
PRO 1070.0121
CYX 1080.0109
SER 1090.0153
GLU 1100.0152
ARG 1110.0096
ARG 1120.0055
LYS 1130.0049
HIE 1140.0060
LEU 1150.0118
PHE 1160.0173
VAL 1170.0202
GLN 1180.0204
ASP 1190.0268
PRO 1200.0272
GLN 1210.0346
THR 1220.0312
CYX 1230.0233
LYS 1240.0213
CYX 1250.0147
SER 1260.0145
CYX 1270.0202
LYS 1280.0193
ASN 1290.0177
THR 1300.0106
ASP 1310.0132
SER 1320.0201
ARG 1330.0227
CYX 1340.0213
LYS 1350.0227
ALA 1360.0289
ARG 1370.0311
GLN 1380.0302
LEU 1390.0261
GLU 1400.0227
LEU 1410.0192
ASN 1420.0184
GLU 1430.0127
ARG 1440.0150
THR 1450.0141
CYX 1460.0114
ARG 1470.0144
CYX 1480.0200
ASP 1490.0190
LYS 1500.0211
PRO 1510.0185
ARG 1520.0187
ARG 1530.0230
GLU 1540.0164
VAL 1550.0156
VAL 1560.0145
LYS 1570.0157
PHE 1580.0144
MET 1590.0151
ASP 1600.0146
VAL 1610.0120
TYR 1620.0117
GLN 1630.0130
ARG 1640.0114
SER 1650.0093
TYR 1660.0100
CYX 1670.0090
HIE 1680.0078
PRO 1690.0064
ILE 1700.0054
GLU 1710.0032
THR 1720.0037
LEU 1730.0026
VAL 1740.0051
ASP 1750.0049
ILE 1760.0065
PHE 1770.0090
GLN 1780.0109
GLU 1790.0122
TYR 1800.0128
PRO 1810.0135
ASP 1820.0150
GLU 1830.0107
ILE 1840.0085
GLU 1850.0091
TYR 1860.0066
ILE 1870.0038
PHE 1880.0055
LYS 1890.0056
PRO 1900.0047
SER 1910.0015
CYX 1920.0024
VAL 1930.0048
PRO 1940.0040
LEU 1950.0056
MET 1960.0051
ARG 1970.0068
CYX 1980.0077
GLY 1990.0067
GLY 2000.0072
CYX 2010.0071
CYX 2020.0085
ASN 2030.0082
ASP 2040.0077
GLU 2050.0051
GLY 2060.0056
LEU 2070.0085
GLU 2080.0078
CYX 2090.0086
VAL 2100.0090
PRO 2110.0093
THR 2120.0093
GLU 2130.0081
GLU 2140.0092
SER 2150.0112
ASN 2160.0135
ILE 2170.0126
THR 2180.0137
MET 2190.0126
GLN 2200.0133
ILE 2210.0108
MET 2220.0109
ARG 2230.0105
ILE 2240.0121
LYS 2250.0142
PRO 2260.0164
HIE 2270.0234
GLN 2280.0244
GLY 2290.0192
GLN 2300.0178
HIE 2310.0172
ILE 2320.0160
GLY 2330.0153
GLU 2340.0149
MET 2350.0135
SER 2360.0146
PHE 2370.0121
LEU 2380.0115
GLN 2390.0082
HIE 2400.0078
ASN 2410.0052
LYS 2420.0068
CYX 2430.0088
GLU 2440.0104
CYX 2450.0100
ARG 2460.0113
PRO 2470.0103
LYS 2480.0082
LYS 2490.0109
ASP 2500.0081
ARG 2510.0084
ALA 2520.0097
ARG 2530.0107
GLN 2540.0132
GLU 2550.0099
ASN 2560.0060
PRO 2570.0061
CYX 2580.0038
GLY 2590.0033
PRO 2600.0039
CYX 2610.0047
SER 2620.0055
GLU 2630.0072
ARG 2640.0062
ARG 2650.0047
LYS 2660.0047
HIE 2670.0063
LEU 2680.0086
PHE 2690.0078
VAL 2700.0088
GLN 2710.0092
ASP 2720.0109
PRO 2730.0128
GLN 2740.0150
THR 2750.0154
CYX 2760.0148
LYS 2770.0129
CYX 2780.0111
SER 2790.0130
CYX 2800.0118
LYS 2810.0127
ASN 2820.0172
THR 2830.0214
ASP 2840.0230
SER 2850.0296
ARG 2860.0295
CYX 2870.0251
LYS 2880.0295
ALA 2890.0345
ARG 2900.0327
GLN 2910.0296
LEU 2920.0237
GLU 2930.0181
LEU 2940.0138
ASN 2950.0081
GLU 2960.0057
ARG 2970.0043
THR 2980.0060
CYX 2990.0084
ARG 3000.0119
CYX 3010.0166
ASP 3020.0206
LYS 3030.0254
PRO 3040.0226
ARG 3050.0266
ARG 3060.0224

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.