CNRS Nantes University US2B US2B
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***  HIV protease  ***

<R2> analysis for 2402051700431573247

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2098
PRO 10.0157
GLN 20.0199
ILE 30.0164
THR 40.0277
LEU 50.0294
TRP 60.0421
GLN 70.0256
ARG 80.0104
PRO 90.0101
LEU 100.0104
VAL 110.0124
THR 120.0131
ILE 130.0104
LYS 140.0099
ILE 150.0067
GLY 160.0081
GLY 170.0104
GLN 180.0120
LEU 190.0128
LYS 200.0114
GLU 210.0105
ALA 220.0085
LEU 230.0083
LEU 240.0083
ASP 250.0066
THR 260.0066
GLY 270.0056
ALA 280.0044
ASP 290.0070
ASP 300.0062
THR 310.0038
VAL 320.0023
LEU 330.0043
GLU 340.0075
GLU 350.0108
MET 360.0128
SER 370.0148
LEU 380.0131
PRO 390.0165
GLY 400.0178
ARG 410.0207
TRP 420.0182
LYS 430.0204
PRO 440.0205
LYS 450.0176
MET 460.0223
ILE 470.0168
GLY 480.0378
GLY 490.0775
ILE 500.2098
GLY 510.1231
GLY 520.0698
PHE 530.0310
ILE 540.0056
LYS 550.0116
VAL 560.0087
ARG 570.0121
GLN 580.0117
TYR 590.0096
ASP 600.0088
GLN 610.0053
ILE 620.0012
LEU 630.0040
ILE 640.0063
GLU 650.0101
ILE 660.0116
CYS 670.0147
GLY 680.0160
HIS 690.0150
LYS 700.0118
ALA 710.0097
ILE 720.0070
GLY 730.0065
THR 740.0058
VAL 750.0025
LEU 760.0038
VAL 770.0057
GLY 780.0056
PRO 790.0070
THR 800.0058
PRO 810.0089
VAL 820.0079
ASN 830.0063
ILE 840.0049
ILE 850.0057
GLY 860.0059
ARG 870.0088
ASN 880.0092
LEU 890.0088
LEU 900.0106
THR 910.0130
GLN 920.0133
ILE 930.0146
GLY 940.0168
CYS 950.0136
THR 960.0061
LEU 970.0202
ASN 980.0493
PHE 990.1199

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.