CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  EXP_1IKQ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

<R2> analysis for 24021912353031383

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0748
LYS 10.0185
ARG 20.0144
TRP 30.0081
SER 40.0177
GLU 50.0167
TRP 60.0089
ALA 70.0133
SER 80.0161
GLY 90.0085
LYS 100.0162
VAL 110.0138
LEU 120.0093
CYS 130.0177
LEU 140.0277
LEU 150.0274
ASP 160.0324
PRO 170.0370
LEU 180.0342
ASP 190.0214
GLY 200.0195
VAL 210.0234
TYR 220.0130
ASN 230.0080
TYR 240.0159
LEU 250.0126
ALA 260.0047
GLN 270.0097
GLN 280.0127
ARG 290.0157
CYS 300.0192
ASN 310.0387
LEU 320.0422
ASP 330.0537
ASP 340.0491
THR 350.0457
TRP 360.0542
GLU 370.0472
GLY 380.0458
LYS 390.0596
ILE 400.0639
TYR 410.0563
ARG 420.0604
VAL 430.0748
LEU 440.0739
ALA 450.0645
GLY 460.0655
ASN 470.0562
PRO 480.0425
ALA 490.0453
LYS 500.0551
HIS 510.0454
ASP 520.0379
LEU 530.0251
ASP 540.0122
ILE 550.0074
LYS 560.0073
PRO 570.0073
THR 580.0100
VAL 590.0108
ILE 600.0095
SER 610.0112
HIS 620.0117
ARG 630.0114
LEU 640.0117
HIS 650.0120
PHE 660.0111
PRO 670.0118
GLU 680.0105
GLY 690.0101
GLY 700.0092
SER 710.0096
LEU 720.0083
ALA 730.0076
ALA 740.0087
LEU 750.0085
THR 760.0072
ALA 770.0077
HIS 780.0087
GLN 790.0078
ALA 800.0067
CYS 810.0079
HIS 820.0092
LEU 830.0096
PRO 840.0104
LEU 850.0094
GLU 860.0092
THR 870.0096
PHE 880.0096
THR 890.0098
ARG 900.0097
HIS 910.0096
ARG 920.0091
GLN 930.0095
PRO 940.0081
ARG 950.0095
GLY 960.0116
TRP 970.0107
GLU 980.0102
GLN 990.0093
LEU 1000.0095
GLU 1010.0096
GLN 1020.0085
CYS 1030.0076
GLY 1040.0084
TYR 1050.0084
PRO 1060.0065
VAL 1070.0062
GLN 1080.0075
ARG 1090.0066
LEU 1100.0047
VAL 1110.0061
ALA 1120.0079
LEU 1130.0068
TYR 1140.0065
LEU 1150.0085
ALA 1160.0097
ALA 1170.0091
ARG 1180.0107
LEU 1190.0090
SER 1200.0088
TRP 1210.0067
ASN 1220.0070
GLN 1230.0069
VAL 1240.0050
ASP 1250.0049
GLN 1260.0071
VAL 1270.0064
ILE 1280.0045
ARG 1290.0068
ASN 1300.0083
ALA 1310.0062
LEU 1320.0067
ALA 1330.0095
SER 1340.0095
PRO 1350.0077
GLY 1360.0071
SER 1370.0084
GLY 1380.0075
GLY 1390.0067
ASP 1400.0051
LEU 1410.0045
GLY 1420.0042
GLU 1430.0022
ALA 1440.0014
ILE 1450.0011
ARG 1460.0028
GLU 1470.0026
GLN 1480.0027
PRO 1490.0028
GLU 1500.0036
GLN 1510.0030
ALA 1520.0011
ARG 1530.0007
LEU 1540.0023
ALA 1550.0034
LEU 1560.0032
THR 1570.0026
LEU 1580.0042
ALA 1590.0055
ALA 1600.0049
ALA 1610.0049
GLU 1620.0067
SER 1630.0072
GLU 1640.0067
ARG 1650.0074
PHE 1660.0087
VAL 1670.0089
ARG 1680.0087
GLN 1690.0098
GLY 1700.0114
THR 1710.0122
GLY 1720.0125
ASN 1730.0110
ASP 1740.0103
GLU 1750.0091
ALA 1760.0101
GLY 1770.0110
ALA 1780.0093
ALA 1790.0089
ASN 1800.0104
ALA 1810.0105
ASP 1820.0112
VAL 1830.0105
VAL 1840.0107
SER 1850.0106
LEU 1860.0109
THR 1870.0111
CYS 1880.0123
PRO 1890.0123
VAL 1900.0131
ALA 1910.0140
ALA 1920.0138
GLY 1930.0120
GLU 1940.0115
CYS 1950.0115
ALA 1960.0096
GLY 1970.0100
PRO 1980.0121
ALA 1990.0122
ASP 2000.0134
SER 2010.0117
GLY 2020.0114
ASP 2030.0114
ALA 2040.0108
LEU 2050.0097
LEU 2060.0097
GLU 2070.0096
ARG 2080.0112
ASN 2090.0113
TYR 2100.0115
PRO 2110.0127
THR 2120.0109
GLY 2130.0110
ALA 2140.0116
GLU 2150.0150
PHE 2160.0150
LEU 2170.0165
GLY 2180.0200
ASP 2190.0229
GLY 2200.0233
GLY 2210.0220
ASP 2220.0189
VAL 2230.0165
SER 2240.0149
PHE 2250.0131
SER 2260.0145
THR 2270.0153
ARG 2280.0181
GLY 2290.0165
THR 2300.0160
GLN 2310.0183
ASN 2320.0201
TRP 2330.0187
THR 2340.0203
VAL 2350.0198
GLU 2360.0216
ARG 2370.0201
LEU 2380.0175
LEU 2390.0185
GLN 2400.0196
ALA 2410.0168
HIS 2420.0155
ARG 2430.0173
GLN 2440.0169
LEU 2450.0146
GLU 2460.0148
GLU 2470.0171
ARG 2480.0138
GLY 2490.0158
TYR 2500.0132
VAL 2510.0117
PHE 2520.0105
VAL 2530.0081
GLY 2540.0080
TYR 2550.0086
HIS 2560.0071
GLY 2570.0081
THR 2580.0069
PHE 2590.0075
LEU 2600.0089
GLU 2610.0069
ALA 2620.0054
ALA 2630.0078
GLN 2640.0088
SER 2650.0073
ILE 2660.0074
VAL 2670.0097
PHE 2680.0107
GLY 2690.0095
GLY 2700.0089
VAL 2710.0071
ARG 2720.0062
ALA 2730.0050
ARG 2740.0028
SER 2750.0030
GLN 2760.0025
ASP 2770.0053
LEU 2780.0058
ASP 2790.0076
ALA 2800.0076
ILE 2810.0072
TRP 2820.0047
ARG 2830.0031
GLY 2840.0019
PHE 2850.0024
TYR 2860.0028
ILE 2870.0051
ALA 2880.0068
GLY 2890.0083
ASP 2900.0105
PRO 2910.0118
ALA 2920.0131
LEU 2930.0107
ALA 2940.0093
TYR 2950.0120
GLY 2960.0118
TYR 2970.0091
ALA 2980.0101
GLN 2990.0100
ASP 3000.0084
GLN 3010.0073
GLU 3020.0084
PRO 3030.0106
ASP 3040.0102
ALA 3050.0112
ARG 3060.0149
GLY 3070.0147
ARG 3080.0147
ILE 3090.0128
ARG 3100.0124
ASN 3110.0131
GLY 3120.0109
ALA 3130.0112
LEU 3140.0110
LEU 3150.0102
ARG 3160.0104
VAL 3170.0087
TYR 3180.0101
VAL 3190.0100
PRO 3200.0120
ARG 3210.0124
SER 3220.0130
SER 3230.0105
LEU 3240.0094
PRO 3250.0093
GLY 3260.0076
PHE 3270.0054
TYR 3280.0028
ARG 3290.0013
THR 3300.0029
SER 3310.0060
LEU 3320.0075
THR 3330.0089
LEU 3340.0075
ALA 3350.0106
ALA 3360.0119
PRO 3370.0135
GLU 3380.0122
ALA 3390.0089
ALA 3400.0093
GLY 3410.0106
GLU 3420.0079
VAL 3430.0061
GLU 3440.0088
ARG 3450.0089
LEU 3460.0061
ILE 3470.0073
GLY 3480.0103
HIS 3490.0111
PRO 3500.0114
LEU 3510.0091
PRO 3520.0075
LEU 3530.0059
ARG 3540.0081
LEU 3550.0085
ASP 3560.0062
ALA 3570.0039
ILE 3580.0011
THR 3590.0024
GLY 3600.0045
PRO 3610.0077
GLU 3620.0089
GLU 3630.0118
GLU 3640.0130
GLY 3650.0134
GLY 3660.0120
ARG 3670.0102
LEU 3680.0074
GLU 3690.0054
THR 3700.0031
ILE 3710.0010
LEU 3720.0034
GLY 3730.0046
TRP 3740.0056
PRO 3750.0083
LEU 3760.0080
ALA 3770.0071
GLU 3780.0087
ARG 3790.0100
THR 3800.0095
VAL 3810.0104
VAL 3820.0096
ILE 3830.0118
PRO 3840.0125
SER 3850.0139
ALA 3860.0169
ILE 3870.0162
PRO 3880.0176
THR 3890.0161
ASP 3900.0183
PRO 3910.0177
ARG 3920.0204
ASN 3930.0189
VAL 3940.0156
GLY 3950.0143
GLY 3960.0171
ASP 3970.0174
LEU 3980.0171
ASP 3990.0201
PRO 4000.0195
SER 4010.0221
SER 4020.0207
ILE 4030.0185
PRO 4040.0201
ASP 4050.0205
LYS 4060.0198
GLU 4070.0171
GLN 4080.0161
ALA 4090.0166
ILE 4100.0153
SER 4110.0126
ALA 4120.0121
LEU 4130.0095
PRO 4140.0090
ASP 4150.0079
TYR 4160.0053
ALA 4170.0043
SER 4180.0014
GLN 4190.0040
PRO 4200.0072
GLY 4210.0087
LYS 4220.0189

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.