CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1AOL_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

<R2> analysis for 240220085659142820

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1140
GLN 10.0291
VAL 20.0258
TYR 30.0142
ASN 40.0205
ILE 50.0105
THR 60.0143
TRP 70.0112
GLU 80.0139
VAL 90.0095
THR 100.0103
ASN 110.0078
GLY 120.0080
ASP 130.0121
ARG 140.0133
GLU 150.0131
THR 160.0129
VAL 170.0102
TRP 180.0093
ALA 190.0105
ILE 200.0086
SER 210.0136
GLY 220.0123
ASN 230.0195
HIS 240.0123
PRO 250.0110
LEU 260.0058
TRP 270.0112
THR 280.0116
TRP 290.0045
TRP 300.0080
PRO 310.0048
VAL 320.0050
LEU 330.0056
THR 340.0032
PRO 350.0053
ASP 360.0052
LEU 370.0049
CYS 380.0072
MET 390.0071
LEU 400.0050
ALA 410.0065
LEU 420.0092
SER 430.0110
GLY 440.0073
PRO 450.0079
PRO 460.0115
HIS 470.0116
TRP 480.0103
GLY 490.0123
LEU 500.0112
GLU 510.0120
TYR 520.0160
GLN 530.0138
ALA 540.0141
PRO 550.0129
TYR 560.0139
SER 570.0133
SER 580.0129
PRO 590.0106
PRO 600.0116
GLY 610.0105
PRO 620.0089
PRO 630.0085
CYS 640.0152
CYS 650.0138
SER 660.0191
GLY 670.0629
SER 680.0851
SER 690.1140
GLY 700.1031
SER 710.0630
SER 720.0706
ALA 730.0628
GLY 740.0392
CYS 750.0196
SER 760.0096
ARG 770.0099
ASP 780.0106
CYS 790.0111
ASP 800.0108
GLU 810.0066
PRO 820.0080
LEU 830.0118
THR 840.0133
SER 850.0123
LEU 860.0140
THR 870.0124
PRO 880.0110
ARG 890.0119
CYS 900.0115
ASN 910.0127
THR 920.0109
ALA 930.0100
TRP 940.0099
ASN 950.0111
ARG 960.0113
LEU 970.0113
LYS 980.0110
LEU 990.0094
ASP 1000.0088
GLN 1010.0089
VAL 1020.0087
THR 1030.0057
HIS 1040.0065
LYS 1050.0097
SER 1060.0114
SER 1070.0140
GLU 1080.0107
GLY 1090.0072
PHE 1100.0043
TYR 1110.0053
VAL 1120.0052
CYS 1130.0069
PRO 1140.0096
GLY 1150.0091
SER 1160.0098
HIS 1170.0126
ARG 1180.0089
PRO 1190.0172
ARG 1200.0649
GLU 1210.0685
ALA 1220.0237
LYS 1230.0242
SER 1240.0066
CYS 1250.0033
GLY 1260.0039
GLY 1270.0048
PRO 1280.0050
ASP 1290.0043
SER 1300.0017
PHE 1310.0027
TYR 1320.0045
CYS 1330.0030
ALA 1340.0018
SER 1350.0031
TRP 1360.0056
GLY 1370.0073
CYS 1380.0057
GLU 1390.0070
THR 1400.0102
THR 1410.0092
GLY 1420.0066
ARG 1430.0067
VAL 1440.0097
TYR 1450.0147
TRP 1460.0156
LYS 1470.0139
PRO 1480.0121
SER 1490.0134
SER 1500.0149
SER 1510.0181
TRP 1520.0157
ASP 1530.0155
TYR 1540.0168
ILE 1550.0129
THR 1560.0111
VAL 1570.0061
ASP 1580.0045
ASN 1590.0012
ASN 1600.0014
LEU 1610.0055
THR 1620.0065
THR 1630.0092
SER 1640.0115
GLN 1650.0111
ALA 1660.0108
VAL 1670.0138
GLN 1680.0156
VAL 1690.0139
CYS 1700.0128
LYS 1710.0144
ASP 1720.0146
ASN 1730.0115
LYS 1740.0121
TRP 1750.0103
CYS 1760.0102
ASN 1770.0070
PRO 1780.0050
LEU 1790.0010
ALA 1800.0028
ILE 1810.0065
GLN 1820.0094
PHE 1830.0126
THR 1840.0158
ASN 1850.0213
ALA 1860.0220
GLY 1870.0194
LYS 1880.0185
GLN 1890.0247
VAL 1900.0242
THR 1910.0247
SER 1920.0264
TRP 1930.0207
THR 1940.0233
THR 1950.0272
GLY 1960.0194
HIS 1970.0152
TYR 1980.0118
TRP 1990.0085
GLY 2000.0048
LEU 2010.0013
ARG 2020.0026
LEU 2030.0062
TYR 2040.0090
VAL 2050.0107
SER 2060.0136
GLY 2070.0153
ARG 2080.0119
ASP 2090.0085
PRO 2100.0076
GLY 2110.0036
LEU 2120.0032
THR 2130.0052
PHE 2140.0073
GLY 2150.0113
ILE 2160.0128
ARG 2170.0170
LEU 2180.0160
ARG 2190.0202
TYR 2200.0170
GLN 2210.0279
ASN 2220.0237
LEU 2230.0412
GLY 2240.0442
PRO 2250.0633
ARG 2260.0738
VAL 2270.0099
PRO 2280.0331

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.