CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

<R2> analysis for 240220085926145927

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0938
ALA 10.0518
ALA 20.0339
PRO 30.0249
TYR 40.0151
GLU 50.0151
ASN 60.0124
LEU 70.0203
MET 80.0230
VAL 90.0238
PRO 100.0287
SER 110.0290
PRO 120.0375
SER 130.0325
MET 140.0318
GLY 150.0390
ARG 160.0351
ASP 170.0297
ILE 180.0209
PRO 190.0122
VAL 200.0089
ALA 210.0054
PHE 220.0056
LEU 230.0054
ALA 240.0058
GLY 250.0156
GLY 260.0166
PRO 270.0189
HIS 280.0197
ALA 290.0157
VAL 300.0147
TYR 310.0102
LEU 320.0111
LEU 330.0096
ASP 340.0113
ALA 350.0135
PHE 360.0144
ASN 370.0158
ALA 380.0120
GLY 390.0121
PRO 400.0074
ASP 410.0069
VAL 420.0081
SER 430.0112
ASN 440.0148
TRP 450.0140
VAL 460.0142
THR 470.0186
ALA 480.0199
GLY 490.0175
ASN 500.0169
ALA 510.0148
MET 520.0134
ASN 530.0156
THR 540.0144
LEU 550.0118
ALA 560.0098
GLY 570.0172
LYS 580.0164
GLY 590.0167
ILE 600.0158
SER 610.0115
VAL 620.0094
VAL 630.0055
ALA 640.0054
PRO 650.0009
ALA 660.0012
GLY 670.0031
GLY 680.0031
ALA 690.0062
TYR 700.0062
SER 710.0073
MET 720.0076
TYR 730.0068
THR 740.0110
ASN 750.0175
TRP 760.0236
GLU 770.0279
GLN 780.0400
ASP 790.0353
GLY 800.0362
SER 810.0327
LYS 820.0243
GLN 830.0206
TRP 840.0132
ASP 850.0111
THR 860.0128
PHE 870.0136
LEU 880.0078
SER 890.0085
ALA 900.0073
GLU 910.0136
LEU 920.0102
PRO 930.0085
ASP 940.0091
TRP 950.0128
LEU 960.0083
ALA 970.0089
ALA 980.0098
ASN 990.0155
ARG 1000.0142
GLY 1010.0139
LEU 1020.0135
ALA 1030.0216
PRO 1040.0203
GLY 1050.0231
GLY 1060.0221
HIS 1070.0186
ALA 1080.0171
ALA 1090.0131
VAL 1100.0114
GLY 1110.0102
ALA 1120.0114
ALA 1130.0139
GLN 1140.0113
GLY 1150.0110
GLY 1160.0096
TYR 1170.0095
GLY 1180.0093
ALA 1190.0113
MET 1200.0092
ALA 1210.0113
LEU 1220.0137
ALA 1230.0140
ALA 1240.0149
PHE 1250.0172
HIS 1260.0184
PRO 1270.0182
ASP 1280.0232
ARG 1290.0188
PHE 1300.0178
GLY 1310.0138
PHE 1320.0110
ALA 1330.0076
GLY 1340.0065
SER 1350.0043
MET 1360.0051
SER 1370.0085
GLY 1380.0103
PHE 1390.0126
LEU 1400.0122
TYR 1410.0109
PRO 1420.0114
SER 1430.0056
ASN 1440.0078
THR 1450.0095
THR 1460.0125
THR 1470.0103
ASN 1480.0062
GLY 1490.0132
ALA 1500.0132
ILE 1510.0106
ALA 1520.0140
ALA 1530.0223
GLY 1540.0189
MET 1550.0098
GLN 1560.0117
GLN 1570.0207
PHE 1580.0191
GLY 1590.0098
GLY 1600.0076
VAL 1610.0243
ASP 1620.0340
THR 1630.0293
ASN 1640.0441
GLY 1650.0386
MET 1660.0241
TRP 1670.0190
GLY 1680.0359
ALA 1690.0561
PRO 1700.0441
GLN 1710.0938
LEU 1720.0787
GLY 1730.0573
ARG 1740.0318
TRP 1750.0119
LYS 1760.0227
TRP 1770.0285
HIS 1780.0149
ASP 1790.0154
PRO 1800.0133
TRP 1810.0174
VAL 1820.0225
HIS 1830.0233
ALA 1840.0186
SER 1850.0296
LEU 1860.0243
LEU 1870.0140
ALA 1880.0218
GLN 1890.0246
ASN 1900.0119
ASN 1910.0077
THR 1920.0012
ARG 1930.0072
VAL 1940.0069
TRP 1950.0092
VAL 1960.0086
TRP 1970.0071
SER 1980.0071
PRO 1990.0090
THR 2000.0205
ASN 2010.0140
PRO 2020.0262
GLY 2030.0278
ALA 2040.0282
SER 2050.0334
ASP 2060.0323
PRO 2070.0335
ALA 2080.0275
ALA 2090.0228
MET 2100.0223
ILE 2110.0229
GLY 2120.0297
GLN 2130.0233
ALA 2140.0224
ALA 2150.0232
GLU 2160.0203
ALA 2170.0175
MET 2180.0149
GLY 2190.0185
ASN 2200.0160
SER 2210.0144
ARG 2220.0232
MET 2230.0219
PHE 2240.0185
TYR 2250.0289
ASN 2260.0399
GLN 2270.0349
TYR 2280.0290
ARG 2290.0465
SER 2300.0549
VAL 2310.0480
GLY 2320.0469
GLY 2330.0357
HIS 2340.0373
ASN 2350.0232
GLY 2360.0233
HIS 2370.0246
PHE 2380.0257
ASP 2390.0239
PHE 2400.0245
PRO 2410.0290
ALA 2420.0296
SER 2430.0190
GLY 2440.0124
ASP 2450.0124
ASN 2460.0152
GLY 2470.0185
TRP 2480.0190
GLY 2490.0204
SER 2500.0127
TRP 2510.0124
ALA 2520.0156
PRO 2530.0164
GLN 2540.0121
LEU 2550.0115
GLY 2560.0151
ALA 2570.0204
MET 2580.0169
SER 2590.0166
GLY 2600.0206
ASP 2610.0185
ILE 2620.0169
VAL 2630.0205
GLY 2640.0205
ALA 2650.0145
ILE 2660.0199
ARG 2670.0272

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.