CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

<R2> analysis for 240220085926145927

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0838
ALA 10.0838
ALA 20.0627
PRO 30.0481
TYR 40.0316
GLU 50.0207
ASN 60.0220
LEU 70.0153
MET 80.0255
VAL 90.0256
PRO 100.0373
SER 110.0385
PRO 120.0491
SER 130.0401
MET 140.0379
GLY 150.0509
ARG 160.0486
ASP 170.0400
ILE 180.0289
PRO 190.0238
VAL 200.0144
ALA 210.0157
PHE 220.0117
LEU 230.0240
ALA 240.0278
GLY 250.0351
GLY 260.0373
PRO 270.0345
HIS 280.0279
ALA 290.0170
VAL 300.0111
TYR 310.0042
LEU 320.0020
LEU 330.0062
ASP 340.0078
ALA 350.0065
PHE 360.0050
ASN 370.0055
ALA 380.0086
GLY 390.0225
PRO 400.0286
ASP 410.0303
VAL 420.0240
SER 430.0152
ASN 440.0147
TRP 450.0132
VAL 460.0206
THR 470.0259
ALA 480.0221
GLY 490.0184
ASN 500.0254
ALA 510.0208
MET 520.0281
ASN 530.0372
THR 540.0311
LEU 550.0304
ALA 560.0393
GLY 570.0462
LYS 580.0412
GLY 590.0432
ILE 600.0316
SER 610.0232
VAL 620.0164
VAL 630.0042
ALA 640.0075
PRO 650.0114
ALA 660.0179
GLY 670.0215
GLY 680.0136
ALA 690.0089
TYR 700.0043
SER 710.0056
MET 720.0034
TYR 730.0078
THR 740.0082
ASN 750.0107
TRP 760.0044
GLU 770.0141
GLN 780.0085
ASP 790.0117
GLY 800.0217
SER 810.0258
LYS 820.0178
GLN 830.0199
TRP 840.0164
ASP 850.0126
THR 860.0205
PHE 870.0221
LEU 880.0156
SER 890.0162
ALA 900.0238
GLU 910.0277
LEU 920.0184
PRO 930.0191
ASP 940.0278
TRP 950.0257
LEU 960.0183
ALA 970.0283
ALA 980.0320
ASN 990.0216
ARG 1000.0196
GLY 1010.0305
LEU 1020.0278
ALA 1030.0324
PRO 1040.0332
GLY 1050.0262
GLY 1060.0253
HIS 1070.0171
ALA 1080.0107
ALA 1090.0044
VAL 1100.0022
GLY 1110.0050
ALA 1120.0057
ALA 1130.0053
GLN 1140.0048
GLY 1150.0055
GLY 1160.0057
TYR 1170.0046
GLY 1180.0051
ALA 1190.0047
MET 1200.0050
ALA 1210.0053
LEU 1220.0056
ALA 1230.0039
ALA 1240.0054
PHE 1250.0031
HIS 1260.0085
PRO 1270.0063
ASP 1280.0159
ARG 1290.0188
PHE 1300.0120
GLY 1310.0110
PHE 1320.0081
ALA 1330.0057
GLY 1340.0055
SER 1350.0067
MET 1360.0072
SER 1370.0087
GLY 1380.0058
PHE 1390.0021
LEU 1400.0037
TYR 1410.0037
PRO 1420.0085
SER 1430.0165
ASN 1440.0143
THR 1450.0206
THR 1460.0193
THR 1470.0145
ASN 1480.0191
GLY 1490.0216
ALA 1500.0183
ILE 1510.0142
ALA 1520.0193
ALA 1530.0206
GLY 1540.0171
MET 1550.0143
GLN 1560.0221
GLN 1570.0227
PHE 1580.0201
GLY 1590.0190
GLY 1600.0240
VAL 1610.0227
ASP 1620.0241
THR 1630.0219
ASN 1640.0289
GLY 1650.0188
MET 1660.0118
TRP 1670.0233
GLY 1680.0344
ALA 1690.0473
PRO 1700.0422
GLN 1710.0668
LEU 1720.0660
GLY 1730.0523
ARG 1740.0417
TRP 1750.0240
LYS 1760.0251
TRP 1770.0298
HIS 1780.0157
ASP 1790.0112
PRO 1800.0118
TRP 1810.0112
VAL 1820.0153
HIS 1830.0173
ALA 1840.0176
SER 1850.0213
LEU 1860.0187
LEU 1870.0144
ALA 1880.0211
GLN 1890.0220
ASN 1900.0161
ASN 1910.0176
THR 1920.0114
ARG 1930.0104
VAL 1940.0110
TRP 1950.0094
VAL 1960.0112
TRP 1970.0121
SER 1980.0129
PRO 1990.0177
THR 2000.0196
ASN 2010.0210
PRO 2020.0185
GLY 2030.0183
ALA 2040.0154
SER 2050.0155
ASP 2060.0140
PRO 2070.0153
ALA 2080.0149
ALA 2090.0093
MET 2100.0082
ILE 2110.0118
GLY 2120.0146
GLN 2130.0130
ALA 2140.0128
ALA 2150.0138
GLU 2160.0098
ALA 2170.0076
MET 2180.0111
GLY 2190.0092
ASN 2200.0052
SER 2210.0102
ARG 2220.0135
MET 2230.0098
PHE 2240.0109
TYR 2250.0167
ASN 2260.0188
GLN 2270.0175
TYR 2280.0185
ARG 2290.0249
SER 2300.0259
VAL 2310.0256
GLY 2320.0289
GLY 2330.0243
HIS 2340.0260
ASN 2350.0188
GLY 2360.0169
HIS 2370.0165
PHE 2380.0173
ASP 2390.0185
PHE 2400.0191
PRO 2410.0240
ALA 2420.0266
SER 2430.0278
GLY 2440.0227
ASP 2450.0161
ASN 2460.0130
GLY 2470.0102
TRP 2480.0061
GLY 2490.0068
SER 2500.0072
TRP 2510.0037
ALA 2520.0020
PRO 2530.0044
GLN 2540.0034
LEU 2550.0048
GLY 2560.0091
ALA 2570.0071
MET 2580.0036
SER 2590.0142
GLY 2600.0196
ASP 2610.0090
ILE 2620.0120
VAL 2630.0264
GLY 2640.0304
ALA 2650.0210
ILE 2660.0260
ARG 2670.0431

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.