CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  2CMZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

<R2> analysis for 240220090224150099

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0448
LYS 10.0288
PHE 20.0267
THR 30.0283
ILE 40.0231
VAL 50.0229
PHE 60.0195
PRO 70.0208
HIS 80.0268
ASN 90.0266
GLN 100.0262
LYS 110.0261
GLY 120.0233
ASN 130.0263
TRP 140.0209
LYS 150.0198
ASN 160.0161
VAL 170.0104
PRO 180.0102
SER 190.0039
ASN 200.0082
TYR 210.0104
HIS 220.0139
TYR 230.0165
CYS 240.0194
PRO 250.0213
SER 260.0244
SER 270.0245
SER 280.0272
ASP 290.0265
LEU 300.0248
ASN 310.0241
TRP 320.0228
HIS 330.0213
ASN 340.0236
ASP 350.0222
LEU 360.0188
ILE 370.0159
GLY 380.0133
THR 390.0084
ALA 400.0075
ILE 410.0045
GLN 420.0073
VAL 430.0064
LYS 440.0086
MET 450.0079
PRO 460.0090
LYS 470.0123
SER 480.0122
HIS 490.0131
LYS 500.0137
ALA 510.0108
ILE 520.0141
GLN 530.0131
ALA 540.0111
ASP 550.0142
GLY 560.0123
TRP 570.0117
MET 580.0131
CYS 590.0123
HIS 600.0138
ALA 610.0155
SER 620.0157
LYS 630.0157
TRP 640.0174
VAL 650.0166
THR 660.0166
THR 670.0157
CYS 680.0150
ASP 690.0148
PHE 700.0161
ARG 710.0197
TRP 720.0224
TYR 730.0220
GLY 740.0188
PRO 750.0146
LYS 760.0124
TYR 770.0118
ILE 780.0121
THR 790.0127
GLN 800.0142
SER 810.0146
ILE 820.0159
ARG 830.0154
SER 840.0156
PHE 850.0141
THR 860.0125
PRO 870.0119
SER 880.0093
VAL 890.0078
GLU 900.0075
GLN 910.0095
CYS 920.0096
LYS 930.0080
GLU 940.0080
SER 950.0103
ILE 960.0102
GLU 970.0087
GLN 980.0102
THR 990.0127
LYS 1000.0123
GLN 1010.0113
GLY 1020.0138
THR 1030.0128
TRP 1040.0142
LEU 1050.0175
ASN 1060.0200
PRO 1070.0206
GLY 1080.0212
PHE 1090.0196
PRO 1100.0205
PRO 1110.0209
GLN 1120.0189
SER 1130.0208
CYS 1140.0184
GLY 1150.0219
TYR 1160.0206
ALA 1170.0226
THR 1180.0219
VAL 1190.0193
THR 1200.0206
ASP 1210.0179
ALA 1220.0193
GLU 1230.0195
ALA 1240.0179
VAL 1250.0170
ILE 1260.0179
VAL 1270.0138
GLN 1280.0149
VAL 1290.0140
THR 1300.0138
PRO 1310.0141
HIS 1320.0144
HIS 1330.0134
VAL 1340.0125
LEU 1350.0131
VAL 1360.0111
ASP 1370.0107
GLU 1380.0110
TYR 1390.0081
THR 1400.0101
GLY 1410.0106
GLU 1420.0106
TRP 1430.0110
VAL 1440.0123
ASP 1450.0140
SER 1460.0153
GLN 1470.0142
PHE 1480.0125
ILE 1490.0125
ASN 1500.0132
GLY 1510.0134
LYS 1520.0117
CYS 1530.0100
SER 1540.0092
ASN 1550.0084
TYR 1560.0086
ILE 1570.0084
CYS 1580.0095
PRO 1590.0105
THR 1600.0127
VAL 1610.0143
HIS 1620.0147
ASN 1630.0137
SER 1640.0140
THR 1650.0133
THR 1660.0109
TRP 1670.0108
HIS 1680.0096
SER 1690.0101
ASP 1700.0111
TYR 1710.0121
LYS 1720.0119
VAL 1730.0123
LYS 1740.0150
GLY 1750.0121
LEU 1760.0112
CYS 1770.0117
ASP 1780.0141
SER 1790.0159
ASN 1800.0137
LEU 1810.0121
ILE 1820.0142
SER 1830.0135
MET 1840.0123
ASP 1850.0106
ILE 1860.0093
THR 1870.0113
PHE 1880.0099
PHE 1890.0136
SER 1900.0144
GLU 1910.0180
ASP 1920.0159
GLY 1930.0120
GLU 1940.0098
LEU 1950.0069
SER 1960.0115
SER 1970.0133
LEU 1980.0101
GLY 1990.0129
LYS 2000.0173
GLU 2010.0204
GLY 2020.0202
THR 2030.0155
GLY 2040.0145
PHE 2050.0122
ARG 2060.0141
SER 2070.0145
ASN 2080.0159
TYR 2090.0161
PHE 2100.0164
ALA 2110.0193
TYR 2120.0183
GLU 2130.0171
THR 2140.0176
GLY 2150.0138
GLY 2160.0178
LYS 2170.0163
ALA 2180.0117
CYS 2190.0108
LYS 2200.0096
MET 2210.0075
GLN 2220.0079
TYR 2230.0063
CYS 2240.0096
LYS 2250.0131
HIS 2260.0105
TRP 2270.0091
GLY 2280.0048
VAL 2290.0040
ARG 2300.0055
LEU 2310.0097
PRO 2320.0133
SER 2330.0134
GLY 2340.0096
VAL 2350.0080
TRP 2360.0034
PHE 2370.0029
GLU 2380.0047
MET 2390.0050
ALA 2400.0092
ASP 2410.0099
LYS 2420.0125
ASP 2430.0141
LEU 2440.0095
PHE 2450.0094
ALA 2460.0147
ALA 2470.0149
ALA 2480.0123
ARG 2490.0162
PHE 2500.0136
PRO 2510.0166
GLU 2520.0152
CYS 2530.0127
PRO 2540.0159
GLU 2550.0145
GLY 2560.0096
SER 2570.0087
SER 2580.0059
ILE 2590.0047
SER 2600.0077
ALA 2610.0088
PRO 2620.0124
SER 2630.0157
GLN 2640.0165
THR 2650.0193
SER 2660.0171
VAL 2670.0199
ASP 2680.0219
VAL 2690.0205
SER 2700.0194
LEU 2710.0211
ILE 2720.0222
GLN 2730.0214
ASP 2740.0227
VAL 2750.0222
GLU 2760.0222
ARG 2770.0229
ILE 2780.0245
LEU 2790.0215
ASP 2800.0217
TYR 2810.0234
SER 2820.0239
LEU 2830.0193
CYS 2840.0174
GLN 2850.0197
GLU 2860.0190
THR 2870.0136
TRP 2880.0120
SER 2890.0160
LYS 2900.0155
ILE 2910.0095
ARG 2920.0107
ALA 2930.0173
GLY 2940.0171
LEU 2950.0201
PRO 2960.0199
ILE 2970.0141
SER 2980.0140
PRO 2990.0080
VAL 3000.0122
ASP 3010.0115
LEU 3020.0061
SER 3030.0101
TYR 3040.0145
LEU 3050.0129
ALA 3060.0147
PRO 3070.0195
LYS 3080.0222
ASN 3090.0255
PRO 3100.0271
GLY 3110.0280
THR 3120.0255
GLY 3130.0224
PRO 3140.0171
ALA 3150.0135
PHE 3160.0083
THR 3170.0077
ILE 3180.0109
ILE 3190.0179
ASN 3200.0231
GLY 3210.0194
THR 3220.0148
LEU 3230.0085
LYS 3240.0121
TYR 3250.0132
PHE 3260.0187
GLU 3270.0223
THR 3280.0232
ARG 3290.0266
TYR 3300.0243
ILE 3310.0256
ARG 3320.0272
VAL 3330.0266
ASP 3340.0279
ILE 3350.0218
ALA 3360.0207
ALA 3370.0158
PRO 3380.0132
ILE 3390.0063
LEU 3400.0076
SER 3410.0084
ARG 3420.0146
MET 3430.0154
VAL 3440.0210
GLY 3450.0244
MET 3460.0309
ILE 3470.0338
SER 3480.0362
GLY 3490.0448
THR 3500.0444
THR 3510.0425
THR 3520.0397
GLU 3530.0330
ARG 3540.0306
GLU 3550.0258
LEU 3560.0219
TRP 3570.0200
ASP 3580.0233
ASP 3590.0225
TRP 3600.0190
ALA 3610.0203
PRO 3620.0229
TYR 3630.0195
GLU 3640.0259
ASP 3650.0270
VAL 3660.0201
GLU 3670.0167
ILE 3680.0111
GLY 3690.0104
PRO 3700.0096
ASN 3710.0063
GLY 3720.0026
VAL 3730.0032
LEU 3740.0063
ARG 3750.0109
THR 3760.0140
SER 3770.0172
SER 3780.0112
GLY 3790.0068
TYR 3800.0049
LYS 3810.0035
PHE 3820.0079
PRO 3830.0111
LEU 3840.0163
TYR 3850.0188
MET 3860.0177
ILE 3870.0239
GLY 3880.0284
HIS 3890.0280
GLY 3900.0305
MET 3910.0240
LEU 3920.0261
ASP 3930.0221
SER 3940.0254
ASP 3950.0188
LEU 3960.0180
HIS 3970.0238
LEU 3980.0214
SER 3990.0211
SER 4000.0196
LYS 4010.0191
ALA 4020.0130
GLN 4030.0130
VAL 4040.0085
PHE 4050.0138
GLU 4060.0161
HIS 4070.0207
PRO 4080.0282
HIS 4090.0326

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.