CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  2V7Y_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

<R2> analysis for 240220090749155238

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1466
MET 10.0032
SER 20.0033
LYS 30.0036
ILE 40.0031
ILE 50.0038
GLY 60.0036
ILE 70.0041
ASP 80.0043
LEU 90.0048
GLY 100.0066
THR 110.0076
THR 120.0087
ASN 130.0076
SER 140.0067
CYS 150.0064
VAL 160.0051
ALA 170.0051
VAL 180.0052
LEU 190.0056
GLU 200.0066
GLY 210.0073
GLY 220.0073
GLU 230.0071
VAL 240.0062
LYS 250.0066
VAL 260.0064
ILE 270.0069
PRO 280.0081
ASN 290.0088
PRO 300.0108
GLU 310.0117
GLY 320.0112
ASN 330.0099
ARG 340.0085
THR 350.0078
THR 360.0083
PRO 370.0094
SER 380.0085
VAL 390.0095
VAL 400.0091
ALA 410.0094
PHE 420.0085
LYS 430.0123
ASN 440.0149
GLY 450.0176
GLU 460.0076
ARG 470.0046
LEU 480.0077
VAL 490.0085
GLY 500.0093
GLU 510.0113
VAL 520.0116
ALA 530.0113
LYS 540.0127
ARG 550.0149
GLN 560.0145
ALA 570.0150
ILE 580.0176
THR 590.0186
ASN 600.0152
PRO 610.0162
ASN 620.0121
THR 630.0115
ILE 640.0104
ILE 650.0104
SER 660.0089
ILE 670.0077
LYS 680.0067
ARG 690.0067
HIS 700.0074
MET 710.0059
GLY 720.0055
THR 730.0070
ASP 740.0083
TYR 750.0090
LYS 760.0101
VAL 770.0109
GLU 780.0126
ILE 790.0116
GLU 800.0135
GLY 810.0142
LYS 820.0118
GLN 830.0110
TYR 840.0087
THR 850.0076
PRO 860.0071
GLN 870.0058
GLU 880.0060
ILE 890.0068
SER 900.0061
ALA 910.0053
ILE 920.0058
ILE 930.0062
LEU 940.0052
GLN 950.0055
TYR 960.0066
LEU 970.0058
LYS 980.0051
SER 990.0061
TYR 1000.0067
ALA 1010.0057
GLU 1020.0056
ASP 1030.0067
TYR 1040.0065
LEU 1050.0051
GLY 1060.0062
GLU 1070.0053
PRO 1080.0046
VAL 1090.0038
THR 1100.0029
ARG 1110.0022
ALA 1120.0025
VAL 1130.0020
ILE 1140.0026
THR 1150.0028
VAL 1160.0027
PRO 1170.0024
ALA 1180.0012
TYR 1190.0011
PHE 1200.0022
ASN 1210.0017
ASP 1220.0021
ALA 1230.0032
GLN 1240.0033
ARG 1250.0024
GLN 1260.0030
ALA 1270.0043
THR 1280.0039
LYS 1290.0033
ASP 1300.0044
ALA 1310.0047
GLY 1320.0039
ARG 1330.0043
ILE 1340.0046
ALA 1350.0045
GLY 1360.0037
LEU 1370.0030
GLU 1380.0023
VAL 1390.0023
GLU 1400.0011
ARG 1410.0010
ILE 1420.0015
ILE 1430.0013
ASN 1440.0013
GLU 1450.0026
PRO 1460.0026
THR 1470.0027
ALA 1480.0031
ALA 1490.0041
ALA 1500.0044
LEU 1510.0045
ALA 1520.0058
TYR 1530.0067
GLY 1540.0071
LEU 1550.0073
ASP 1560.0095
LYS 1570.0098
GLU 1580.0106
GLU 1590.0108
ASP 1600.0099
GLN 1610.0089
THR 1620.0076
ILE 1630.0065
LEU 1640.0052
VAL 1650.0044
TYR 1660.0042
ASP 1670.0039
LEU 1680.0043
GLY 1690.0061
GLY 1700.0068
GLY 1710.0060
THR 1720.0038
PHE 1730.0026
ASP 1740.0020
VAL 1750.0024
SER 1760.0030
ILE 1770.0045
LEU 1780.0050
GLU 1790.0065
LEU 1800.0071
GLY 1810.0086
ASP 1820.0093
GLY 1830.0074
VAL 1840.0062
PHE 1850.0052
GLU 1860.0050
VAL 1870.0039
LYS 1880.0047
ALA 1890.0036
THR 1900.0021
ALA 1910.0015
GLY 1920.0008
ASP 1930.0016
ASN 1940.0029
HIS 1950.0038
LEU 1960.0035
GLY 1970.0050
GLY 1980.0067
ASP 1990.0073
ASP 2000.0051
PHE 2010.0049
ASP 2020.0064
GLN 2030.0060
VAL 2040.0028
ILE 2050.0025
ILE 2060.0058
ASP 2070.0066
TYR 2080.0050
LEU 2090.0050
VAL 2100.0098
ASN 2110.0120
GLN 2120.0120
PHE 2130.0134
LYS 2140.0189
GLN 2150.0209
GLU 2160.0213
HIS 2170.0244
GLY 2180.0270
ILE 2190.0246
ASP 2200.0199
LEU 2210.0172
SER 2220.0182
LYS 2230.0224
ASP 2240.0210
LYS 2250.0223
MET 2260.0174
ALA 2270.0140
LEU 2280.0153
GLN 2290.0156
ARG 2300.0136
LEU 2310.0100
LYS 2320.0118
ASP 2330.0128
ALA 2340.0097
ALA 2350.0077
GLU 2360.0100
LYS 2370.0112
ALA 2380.0083
LYS 2390.0078
LYS 2400.0109
GLU 2410.0120
LEU 2420.0101
SER 2430.0114
GLY 2440.0156
VAL 2450.0148
THR 2460.0135
GLN 2470.0111
THR 2480.0095
GLN 2490.0078
ILE 2500.0052
SER 2510.0050
LEU 2520.0069
PRO 2530.0085
PHE 2540.0150
ILE 2550.0151
SER 2560.0240
ALA 2570.0331
ASN 2580.0428
GLU 2590.0698
ASN 2600.0571
GLY 2610.0374
PRO 2620.0233
LEU 2630.0178
HIS 2640.0081
LEU 2650.0044
GLU 2660.0026
MET 2670.0045
THR 2680.0071
LEU 2690.0062
THR 2700.0088
ARG 2710.0088
ALA 2720.0097
LYS 2730.0072
PHE 2740.0045
GLU 2750.0059
GLU 2760.0062
LEU 2770.0038
SER 2780.0022
ALA 2790.0038
HIS 2800.0026
LEU 2810.0015
VAL 2820.0028
GLU 2830.0025
ARG 2840.0012
THR 2850.0019
MET 2860.0029
GLY 2870.0025
PRO 2880.0020
VAL 2890.0035
ARG 2900.0044
GLN 2910.0041
ALA 2920.0040
LEU 2930.0056
GLN 2940.0061
ASP 2950.0055
ALA 2960.0062
GLY 2970.0077
LEU 2980.0079
THR 2990.0082
PRO 3000.0079
ALA 3010.0095
ASP 3020.0091
ILE 3030.0081
ASP 3040.0089
LYS 3050.0081
VAL 3060.0070
ILE 3070.0061
LEU 3080.0058
VAL 3090.0052
GLY 3100.0066
GLY 3110.0079
SER 3120.0066
THR 3130.0067
ARG 3140.0079
ILE 3150.0069
PRO 3160.0082
ALA 3170.0068
VAL 3180.0055
GLN 3190.0068
GLU 3200.0074
ALA 3210.0060
ILE 3220.0058
LYS 3230.0075
ARG 3240.0076
GLU 3250.0065
LEU 3260.0075
GLY 3270.0088
LYS 3280.0090
GLU 3290.0092
PRO 3300.0081
HIS 3310.0088
LYS 3320.0094
GLY 3330.0095
VAL 3340.0076
ASN 3350.0076
PRO 3360.0062
ASP 3370.0064
GLU 3380.0059
VAL 3390.0052
VAL 3400.0040
ALA 3410.0046
ILE 3420.0050
GLY 3430.0039
ALA 3440.0032
ALA 3450.0041
ILE 3460.0044
GLN 3470.0030
GLY 3480.0030
GLY 3490.0043
VAL 3500.0040
ILE 3510.0028
ALA 3520.0037
GLY 3530.0050
GLU 3540.0057
VAL 3550.0059
LYS 3560.0066
ASP 3570.0068
VAL 3580.0055
VAL 3590.0048
LEU 3600.0037
LEU 3610.0035
ASP 3620.0025
VAL 3630.0029
THR 3640.0028
PRO 3650.0028
LEU 3660.0036
SER 3670.0042
LEU 3680.0036
GLY 3690.0035
ILE 3700.0027
GLU 3710.0030
THR 3720.0027
MET 3730.0024
GLY 3740.0038
GLY 3750.0045
VAL 3760.0046
PHE 3770.0044
THR 3780.0040
LYS 3790.0042
LEU 3800.0036
ILE 3810.0039
GLU 3820.0046
ARG 3830.0040
ASN 3840.0038
THR 3850.0037
THR 3860.0034
ILE 3870.0030
PRO 3880.0023
THR 3890.0025
SER 3900.0023
LYS 3910.0030
SER 3920.0029
GLN 3930.0031
VAL 3940.0041
PHE 3950.0031
THR 3960.0046
THR 3970.0057
ALA 3980.0054
ALA 3990.0076
ASP 4000.0096
ASN 4010.0103
GLN 4020.0085
THR 4030.0084
THR 4040.0066
VAL 4050.0044
ASP 4060.0024
ILE 4070.0015
HIS 4080.0025
VAL 4090.0028
LEU 4100.0036
GLN 4110.0040
GLY 4120.0047
GLU 4130.0056
ARG 4140.0062
PRO 4150.0061
MET 4160.0058
ALA 4170.0049
ALA 4180.0056
ASP 4190.0062
ASN 4200.0054
LYS 4210.0047
SER 4220.0039
LEU 4230.0032
GLY 4240.0040
ARG 4250.0031
PHE 4260.0029
GLN 4270.0043
LEU 4280.0044
THR 4290.0064
GLY 4300.0080
ILE 4310.0078
PRO 4320.0098
PRO 4330.0109
ALA 4340.0106
PRO 4350.0103
ARG 4360.0083
GLY 4370.0074
VAL 4380.0089
PRO 4390.0074
GLN 4400.0060
ILE 4410.0041
GLU 4420.0030
VAL 4430.0017
THR 4440.0021
PHE 4450.0022
ASP 4460.0021
ILE 4470.0024
ASP 4480.0022
ALA 4490.0016
ASN 4500.0014
GLY 4510.0018
ILE 4520.0020
VAL 4530.0023
HIS 4540.0020
VAL 4550.0015
ARG 4560.0009
ALA 4570.0018
LYS 4580.0036
ASP 4590.0053
LEU 4600.0067
GLY 4610.0082
THR 4620.0080
ASN 4630.0064
LYS 4640.0056
GLU 4650.0037
GLN 4660.0024
SER 4670.0010
ILE 4680.0015
THR 4690.0026
ILE 4700.0021
LYS 4710.0020
SER 4720.0034
SER 4730.0055
SER 4740.0059
GLY 4750.0062
LEU 4760.0062
SER 4770.0063
GLU 4780.0058
GLU 4790.0067
GLU 4800.0067
ILE 4810.0055
GLN 4820.0058
ARG 4830.0066
MET 4840.0055
ILE 4850.0052
LYS 4860.0053
GLU 4870.0065
ALA 4880.0063
GLU 4890.0082
GLU 4900.0141
ASN 4910.0113
ALA 4920.0184
GLU 4930.0348
ALA 4940.0369
ASP 4950.0334
ARG 4960.0537
LYS 4970.0649
ARG 4980.0624
LYS 4990.0568
GLU 5000.0888
ALA 5010.0987
ALA 5020.0946
GLU 5030.1102
LEU 5040.1466

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.