CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  2V7Y_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

<R2> analysis for 240220090749155238

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0614
MET 10.0111
SER 20.0101
LYS 30.0077
ILE 40.0069
ILE 50.0055
GLY 60.0044
ILE 70.0045
ASP 80.0041
LEU 90.0051
GLY 100.0042
THR 110.0051
THR 120.0027
ASN 130.0012
SER 140.0024
CYS 150.0020
VAL 160.0033
ALA 170.0026
VAL 180.0036
LEU 190.0030
GLU 200.0039
GLY 210.0034
GLY 220.0013
GLU 230.0013
VAL 240.0009
LYS 250.0027
VAL 260.0027
ILE 270.0047
PRO 280.0061
ASN 290.0069
PRO 300.0094
GLU 310.0091
GLY 320.0086
ASN 330.0064
ARG 340.0040
THR 350.0026
THR 360.0034
PRO 370.0026
SER 380.0036
VAL 390.0048
VAL 400.0073
ALA 410.0087
PHE 420.0115
LYS 430.0132
ASN 440.0159
GLY 450.0166
GLU 460.0148
ARG 470.0125
LEU 480.0104
VAL 490.0077
GLY 500.0058
GLU 510.0063
VAL 520.0085
ALA 530.0075
LYS 540.0053
ARG 550.0072
GLN 560.0081
ALA 570.0060
ILE 580.0069
THR 590.0088
ASN 600.0092
PRO 610.0087
ASN 620.0097
THR 630.0075
ILE 640.0067
ILE 650.0047
SER 660.0055
ILE 670.0077
LYS 680.0079
ARG 690.0091
HIS 700.0109
MET 710.0109
GLY 720.0129
THR 730.0154
ASP 740.0171
TYR 750.0145
LYS 760.0141
VAL 770.0119
GLU 780.0133
ILE 790.0128
GLU 800.0148
GLY 810.0170
LYS 820.0170
GLN 830.0160
TYR 840.0140
THR 850.0131
PRO 860.0107
GLN 870.0110
GLU 880.0119
ILE 890.0094
SER 900.0080
ALA 910.0097
ILE 920.0094
ILE 930.0070
LEU 940.0073
GLN 950.0093
TYR 960.0082
LEU 970.0066
LYS 980.0083
SER 990.0098
TYR 1000.0088
ALA 1010.0078
GLU 1020.0100
ASP 1030.0108
TYR 1040.0091
LEU 1050.0092
GLY 1060.0116
GLU 1070.0118
PRO 1080.0120
VAL 1090.0098
THR 1100.0110
ARG 1110.0095
ALA 1120.0074
VAL 1130.0069
ILE 1140.0069
THR 1150.0073
VAL 1160.0087
PRO 1170.0093
ALA 1180.0106
TYR 1190.0111
PHE 1200.0111
ASN 1210.0121
ASP 1220.0120
ALA 1230.0122
GLN 1240.0117
ARG 1250.0114
GLN 1260.0116
ALA 1270.0113
THR 1280.0094
LYS 1290.0101
ASP 1300.0117
ALA 1310.0095
GLY 1320.0091
ARG 1330.0121
ILE 1340.0127
ALA 1350.0107
GLY 1360.0123
LEU 1370.0106
GLU 1380.0113
VAL 1390.0097
GLU 1400.0096
ARG 1410.0094
ILE 1420.0092
ILE 1430.0088
ASN 1440.0091
GLU 1450.0075
PRO 1460.0080
THR 1470.0081
ALA 1480.0063
ALA 1490.0060
ALA 1500.0068
LEU 1510.0058
ALA 1520.0046
TYR 1530.0054
GLY 1540.0059
LEU 1550.0049
ASP 1560.0046
LYS 1570.0060
GLU 1580.0068
GLU 1590.0082
ASP 1600.0094
GLN 1610.0094
THR 1620.0100
ILE 1630.0090
LEU 1640.0092
VAL 1650.0081
TYR 1660.0087
ASP 1670.0076
LEU 1680.0076
GLY 1690.0061
GLY 1700.0054
GLY 1710.0073
THR 1720.0085
PHE 1730.0092
ASP 1740.0096
VAL 1750.0092
SER 1760.0092
ILE 1770.0096
LEU 1780.0093
GLU 1790.0097
LEU 1800.0086
GLY 1810.0088
ASP 1820.0083
GLY 1830.0077
VAL 1840.0090
PHE 1850.0087
GLU 1860.0100
VAL 1870.0098
LYS 1880.0106
ALA 1890.0101
THR 1900.0102
ALA 1910.0107
GLY 1920.0107
ASP 1930.0114
ASN 1940.0108
HIS 1950.0105
LEU 1960.0097
GLY 1970.0077
GLY 1980.0062
ASP 1990.0061
ASP 2000.0079
PHE 2010.0075
ASP 2020.0050
GLN 2030.0063
VAL 2040.0078
ILE 2050.0057
ILE 2060.0038
ASP 2070.0062
TYR 2080.0062
LEU 2090.0027
VAL 2100.0034
ASN 2110.0050
GLN 2120.0030
PHE 2130.0019
LYS 2140.0040
GLN 2150.0021
GLU 2160.0029
HIS 2170.0060
GLY 2180.0067
ILE 2190.0087
ASP 2200.0088
LEU 2210.0079
SER 2220.0094
LYS 2230.0131
ASP 2240.0123
LYS 2250.0121
MET 2260.0108
ALA 2270.0083
LEU 2280.0068
GLN 2290.0061
ARG 2300.0053
LEU 2310.0028
LYS 2320.0025
ASP 2330.0027
ALA 2340.0034
ALA 2350.0028
GLU 2360.0028
LYS 2370.0048
ALA 2380.0062
LYS 2390.0062
LYS 2400.0064
GLU 2410.0086
LEU 2420.0098
SER 2430.0098
GLY 2440.0117
VAL 2450.0136
THR 2460.0150
GLN 2470.0136
THR 2480.0114
GLN 2490.0106
ILE 2500.0081
SER 2510.0091
LEU 2520.0082
PRO 2530.0117
PHE 2540.0130
ILE 2550.0098
SER 2560.0118
ALA 2570.0155
ASN 2580.0168
GLU 2590.0218
ASN 2600.0211
GLY 2610.0200
PRO 2620.0162
LEU 2630.0121
HIS 2640.0102
LEU 2650.0064
GLU 2660.0085
MET 2670.0082
THR 2680.0106
LEU 2690.0098
THR 2700.0127
ARG 2710.0126
ALA 2720.0149
LYS 2730.0129
PHE 2740.0107
GLU 2750.0129
GLU 2760.0142
LEU 2770.0118
SER 2780.0114
ALA 2790.0140
HIS 2800.0141
LEU 2810.0119
VAL 2820.0122
GLU 2830.0137
ARG 2840.0132
THR 2850.0117
MET 2860.0124
GLY 2870.0134
PRO 2880.0122
VAL 2890.0112
ARG 2900.0123
GLN 2910.0125
ALA 2920.0110
LEU 2930.0118
GLN 2940.0135
ASP 2950.0123
ALA 2960.0120
GLY 2970.0138
LEU 2980.0134
THR 2990.0137
PRO 3000.0126
ALA 3010.0132
ASP 3020.0125
ILE 3030.0111
ASP 3040.0104
LYS 3050.0092
VAL 3060.0090
ILE 3070.0076
LEU 3080.0072
VAL 3090.0061
GLY 3100.0053
GLY 3110.0046
SER 3120.0064
THR 3130.0079
ARG 3140.0078
ILE 3150.0092
PRO 3160.0113
ALA 3170.0124
VAL 3180.0113
GLN 3190.0108
GLU 3200.0126
ALA 3210.0129
ILE 3220.0117
LYS 3230.0123
ARG 3240.0140
GLU 3250.0134
LEU 3260.0128
GLY 3270.0134
LYS 3280.0120
GLU 3290.0109
PRO 3300.0094
HIS 3310.0081
LYS 3320.0072
GLY 3330.0058
VAL 3340.0049
ASN 3350.0041
PRO 3360.0045
ASP 3370.0026
GLU 3380.0018
VAL 3390.0034
VAL 3400.0043
ALA 3410.0031
ILE 3420.0024
GLY 3430.0044
ALA 3440.0051
ALA 3450.0039
ILE 3460.0043
GLN 3470.0062
GLY 3480.0061
GLY 3490.0053
VAL 3500.0067
ILE 3510.0081
ALA 3520.0077
GLY 3530.0073
GLU 3540.0051
VAL 3550.0052
LYS 3560.0063
ASP 3570.0075
VAL 3580.0075
VAL 3590.0090
LEU 3600.0094
LEU 3610.0107
ASP 3620.0107
VAL 3630.0108
THR 3640.0105
PRO 3650.0112
LEU 3660.0102
SER 3670.0077
LEU 3680.0056
GLY 3690.0027
ILE 3700.0046
GLU 3710.0070
THR 3720.0125
MET 3730.0220
GLY 3740.0183
GLY 3750.0085
VAL 3760.0100
PHE 3770.0061
THR 3780.0079
LYS 3790.0043
LEU 3800.0029
ILE 3810.0053
GLU 3820.0065
ARG 3830.0089
ASN 3840.0103
THR 3850.0096
THR 3860.0108
ILE 3870.0110
PRO 3880.0117
THR 3890.0083
SER 3900.0050
LYS 3910.0038
SER 3920.0074
GLN 3930.0130
VAL 3940.0225
PHE 3950.0257
THR 3960.0353
THR 3970.0410
ALA 3980.0424
ALA 3990.0511
ASP 4000.0594
ASN 4010.0604
GLN 4020.0519
THR 4030.0513
THR 4040.0428
VAL 4050.0332
ASP 4060.0226
ILE 4070.0152
HIS 4080.0091
VAL 4090.0063
LEU 4100.0052
GLN 4110.0078
GLY 4120.0087
GLU 4130.0099
ARG 4140.0108
PRO 4150.0112
MET 4160.0078
ALA 4170.0029
ALA 4180.0033
ASP 4190.0078
ASN 4200.0077
LYS 4210.0099
SER 4220.0092
LEU 4230.0114
GLY 4240.0155
ARG 4250.0161
PHE 4260.0218
GLN 4270.0301
LEU 4280.0323
THR 4290.0423
GLY 4300.0494
ILE 4310.0473
PRO 4320.0554
PRO 4330.0610
ALA 4340.0603
PRO 4350.0614
ARG 4360.0544
GLY 4370.0490
VAL 4380.0512
PRO 4390.0439
GLN 4400.0352
ILE 4410.0275
GLU 4420.0184
VAL 4430.0119
THR 4440.0058
PHE 4450.0037
ASP 4460.0067
ILE 4470.0098
ASP 4480.0121
ALA 4490.0124
ASN 4500.0121
GLY 4510.0131
ILE 4520.0125
VAL 4530.0104
HIS 4540.0108
VAL 4550.0085
ARG 4560.0116
ALA 4570.0183
LYS 4580.0235
ASP 4590.0315
LEU 4600.0323
GLY 4610.0407
THR 4620.0417
ASN 4630.0336
LYS 4640.0353
GLU 4650.0283
GLN 4660.0249
SER 4670.0189
ILE 4680.0180
THR 4690.0145
ILE 4700.0122
LYS 4710.0112
SER 4720.0114
SER 4730.0137
SER 4740.0141
GLY 4750.0156
LEU 4760.0152
SER 4770.0191
GLU 4780.0196
GLU 4790.0213
GLU 4800.0188
ILE 4810.0174
GLN 4820.0193
ARG 4830.0199
MET 4840.0174
ILE 4850.0171
LYS 4860.0200
GLU 4870.0194
ALA 4880.0165
GLU 4890.0186
GLU 4900.0221
ASN 4910.0191
ALA 4920.0181
GLU 4930.0247
ALA 4940.0247
ASP 4950.0203
ARG 4960.0254
LYS 4970.0309
ARG 4980.0274
LYS 4990.0279
GLU 5000.0356
ALA 5010.0377
ALA 5020.0353
GLU 5030.0422
LEU 5040.0501

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.