CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

<R2> analysis for 240220091929168908

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1323
GLY 10.1323
HIS 20.0698
MET 30.0323
GLY 40.0195
SER 50.0281
SER 60.0286
VAL 70.0174
LEU 80.0131
GLU 90.0159
GLU 100.0193
LEU 110.0146
VAL 120.0119
GLN 130.0142
LEU 140.0145
VAL 150.0102
LYS 160.0101
ASP 170.0130
LYS 180.0106
ASN 190.0067
ILE 200.0063
ASP 210.0052
ILE 220.0060
SER 230.0075
ILE 240.0102
LYS 250.0156
TYR 260.0197
ASP 270.0222
PRO 280.0308
ARG 290.0305
LYS 300.0246
ASP 310.0259
SER 320.0323
GLU 330.0272
VAL 340.0249
PHE 350.0171
ALA 360.0156
ASN 370.0153
ARG 380.0104
VAL 390.0088
ILE 400.0061
THR 410.0068
ASP 420.0104
ASP 430.0096
ILE 440.0108
GLU 450.0109
LEU 460.0074
LEU 470.0074
LYS 480.0099
LYS 490.0090
ILE 500.0092
LEU 510.0095
ALA 520.0098
TYR 530.0144
PHE 540.0146
LEU 550.0107
PRO 560.0131
GLU 570.0415
ASP 580.0257
ALA 590.0055
ILE 600.0076
LEU 610.0144
LYS 620.0340
GLY 630.0412
GLY 640.0353
HIS 650.0373
TYR 660.0262
ASP 670.0260
ASN 680.0366
GLN 690.0272
LEU 700.0208
GLN 710.0250
ASN 720.0280
GLY 730.0209
ILE 740.0185
LYS 750.0182
ARG 760.0185
VAL 770.0170
LYS 780.0180
GLU 790.0200
PHE 800.0169
LEU 810.0147
GLU 820.0169
SER 830.0184
SER 840.0147
PRO 850.0120
ASN 860.0104
THR 870.0072
GLN 880.0079
TRP 890.0087
GLU 900.0105
LEU 910.0092
ARG 920.0129
ALA 930.0132
PHE 940.0116
MET 950.0129
ALA 960.0143
VAL 970.0147
MET 980.0139
HIS 990.0158
PHE 1000.0152
SER 1010.0169
LEU 1020.0166
THR 1030.0191
ALA 1040.0213
ASP 1050.0151
ARG 1060.0111
ILE 1070.0106
ASP 1080.0094
ASP 1090.0093
ASP 1100.0097
ILE 1110.0062
LEU 1120.0098
LYS 1130.0108
VAL 1140.0095
ILE 1150.0103
VAL 1160.0127
ASP 1170.0126
SER 1180.0123
MET 1190.0137
ASN 1200.0137
HIS 1210.0135
HIS 1220.0136
GLY 1230.0136
ASP 1240.0138
ALA 1250.0134
ARG 1260.0163
SER 1270.0132
LYS 1280.0123
LEU 1290.0112
ARG 1300.0111
GLU 1310.0056
GLU 1320.0051
LEU 1330.0053
ALA 1340.0099
GLU 1350.0126
LEU 1360.0113
THR 1370.0144
ALA 1380.0196
GLU 1390.0181
LEU 1400.0170
LYS 1410.0250
ILE 1420.0189
TYR 1430.0179
SER 1440.0181
VAL 1450.0168
ILE 1460.0144
GLN 1470.0135
ALA 1480.0110
GLU 1490.0070
ILE 1500.0071
ASN 1510.0072
LYS 1520.0026
HIS 1530.0070
LEU 1540.0112
SER 1550.0126
SER 1560.0172
SER 1570.0225
GLY 1580.0180
THR 1590.0143
ILE 1600.0068
ASN 1610.0033
ILE 1620.0044
HIS 1630.0051
ASP 1640.0054
LYS 1650.0057
SER 1660.0054
ILE 1670.0085
ASN 1680.0112
LEU 1690.0126
MET 1700.0155
ASP 1710.0201
LYS 1720.0300
ASN 1730.0301
LEU 1740.0234
TYR 1750.0311
GLY 1760.0397
TYR 1770.0449
THR 1780.0524
ASP 1790.0592
GLU 1800.0497
GLU 1810.0535
ILE 1820.0538
PHE 1830.0375
LYS 1840.0315
ALA 1850.0360
SER 1860.0345
ALA 1870.0226
GLU 1880.0212
TYR 1890.0194
LYS 1900.0177
ILE 1910.0178
LEU 1920.0146
GLU 1930.0150
LYS 1940.0140
MET 1950.0142
PRO 1960.0114
GLN 1970.0097
THR 1980.0084
THR 1990.0123
ILE 2000.0122
GLN 2010.0172
VAL 2020.0219
ASP 2030.0390
GLY 2040.0200
SER 2050.0146
GLU 2060.0110
LYS 2070.0106
LYS 2080.0106
ILE 2090.0112
VAL 2100.0114
SER 2110.0088
ILE 2120.0097
LYS 2130.0093
ASP 2140.0111
PHE 2150.0147
LEU 2160.0148
GLY 2170.0151
SER 2180.0167
GLU 2190.0184
ASN 2200.0189
LYS 2210.0172
ARG 2220.0116
THR 2230.0163
GLY 2240.0178
ALA 2250.0185
LEU 2260.0174
GLY 2270.0193
ASN 2280.0173
LEU 2290.0130
LYS 2300.0097
ASN 2310.0056
SER 2320.0077
TYR 2330.0123
SER 2340.0177
TYR 2350.0216
ASN 2360.0286
LEU 2370.0261
ASN 2380.0260
ASP 2390.0280
LEU 2400.0219
VAL 2410.0160
SER 2420.0189
GLN 2430.0221
LYS 2440.0172
THR 2450.0146
THR 2460.0175
GLN 2470.0196
LEU 2480.0175
SER 2490.0160
ASP 2500.0146
ILE 2510.0158
THR 2520.0152
SER 2530.0086
ARG 2540.0061
PHE 2550.0083
ASN 2560.0054
SER 2570.0060
ALA 2580.0056
ILE 2590.0050
GLU 2600.0103
ALA 2610.0136
LEU 2620.0121
ASN 2630.0156
ARG 2640.0181
PHE 2650.0175
ILE 2660.0180
GLN 2670.0201
LYS 2680.0181
TYR 2690.0179
ASP 2700.0188
SER 2710.0190
VAL 2720.0148
MET 2730.0156
GLN 2740.0180
ARG 2750.0139
LEU 2760.0098

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.