CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1IKQ_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

<R2> analysis for 240220092014169949

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0464
GLU 10.0094
GLU 20.0126
ALA 30.0132
PHE 40.0150
ASP 50.0153
LEU 60.0135
TRP 70.0152
ASN 80.0186
GLU 90.0184
CYS 100.0166
ALA 110.0172
LYS 120.0197
ALA 130.0197
CYS 140.0193
VAL 150.0194
LEU 160.0170
ASP 170.0188
LEU 180.0159
LYS 190.0181
ASP 200.0152
GLY 210.0113
VAL 220.0089
ARG 230.0104
SER 240.0094
SER 250.0103
ARG 260.0112
MET 270.0112
SER 280.0138
VAL 290.0140
ASP 300.0155
PRO 310.0177
ALA 320.0163
ILE 330.0143
ALA 340.0161
ASP 350.0164
THR 360.0144
ASN 370.0145
GLY 380.0125
GLN 390.0113
GLY 400.0095
VAL 410.0081
LEU 420.0083
HIS 430.0077
TYR 440.0075
SER 450.0089
MET 460.0104
VAL 470.0123
LEU 480.0129
GLU 490.0168
GLY 500.0171
GLY 510.0202
ASN 520.0208
ASP 530.0191
ALA 540.0164
LEU 550.0128
LYS 560.0093
LEU 570.0068
ALA 580.0051
ILE 590.0055
ASP 600.0066
ASN 610.0077
ALA 620.0071
LEU 630.0054
SER 640.0056
ILE 650.0071
THR 660.0100
SER 670.0125
ASP 680.0160
GLY 690.0163
LEU 700.0169
THR 710.0145
ILE 720.0110
ARG 730.0124
ARG 740.0096
LEU 750.0068
GLU 760.0070
GLY 770.0074
GLY 780.0094
VAL 790.0117
GLU 800.0134
PRO 810.0132
ASN 820.0146
LYS 830.0132
PRO 840.0106
VAL 850.0097
ARG 860.0093
TYR 870.0084
SER 880.0096
TYR 890.0101
THR 900.0131
ARG 910.0134
GLN 920.0161
ALA 930.0183
ARG 940.0190
GLY 950.0178
SER 960.0156
TRP 970.0122
SER 980.0098
LEU 990.0073
ASN 1000.0058
TRP 1010.0053
LEU 1020.0059
VAL 1030.0069
PRO 1040.0079
ILE 1050.0094
GLY 1060.0119
HIS 1070.0130
GLU 1080.0110
LYS 1090.0092
PRO 1100.0078
SER 1110.0084
ASN 1120.0068
ILE 1130.0059
LYS 1140.0046
VAL 1150.0042
PHE 1160.0046
ILE 1170.0067
HIS 1180.0088
GLU 1190.0119
LEU 1200.0140
ASN 1210.0176
ALA 1220.0204
GLY 1230.0196
ASN 1240.0165
GLN 1250.0146
LEU 1260.0121
SER 1270.0143
HIS 1280.0131
MET 1290.0100
MET 1300.0070
SER 1310.0063
PRO 1320.0057
ILE 1330.0042
TYR 1340.0051
THR 1350.0058
ILE 1360.0066
GLU 1370.0080
MET 1380.0092
GLY 1390.0118
ASP 1400.0128
GLU 1410.0138
LEU 1420.0110
LEU 1430.0101
ALA 1440.0126
LYS 1450.0110
LEU 1460.0088
ALA 1470.0104
ARG 1480.0125
ASP 1490.0124
ALA 1500.0093
THR 1510.0082
PHE 1520.0071
PHE 1530.0066
VAL 1540.0088
ARG 1550.0103
ALA 1560.0138
HIS 1570.0146
GLU 1580.0189
SER 1590.0210
ASN 1600.0255
GLU 1610.0255
MET 1620.0263
GLN 1630.0237
PRO 1640.0205
THR 1650.0190
LEU 1660.0167
ALA 1670.0177
ILE 1680.0153
SER 1690.0155
HIS 1700.0146
ALA 1710.0127
GLY 1720.0125
VAL 1730.0110
SER 1740.0109
VAL 1750.0105
VAL 1760.0096
VAL 1770.0108
MET 1780.0088
ALA 1790.0088
GLN 1800.0067
LYS 1810.0088
ARG 1820.0076
TRP 1830.0072
SER 1840.0062
GLU 1850.0051
TRP 1860.0054
ALA 1870.0045
SER 1880.0042
GLY 1890.0043
LYS 1900.0043
VAL 1910.0047
LEU 1920.0043
CYS 1930.0049
LEU 1940.0055
LEU 1950.0055
ASP 1960.0059
PRO 1970.0083
LEU 1980.0079
ASP 1990.0084
GLY 2000.0074
VAL 2010.0035
TYR 2020.0040
ASN 2030.0035
TYR 2040.0031
LEU 2050.0025
ALA 2060.0032
GLN 2070.0038
GLN 2080.0042
ARG 2090.0052
CYS 2100.0064
ASN 2110.0058
ASN 2120.0074
LEU 2130.0065
ASP 2140.0068
ASP 2150.0059
THR 2160.0056
TRP 2170.0061
GLU 2180.0054
GLU 2190.0063
GLY 2200.0063
LYS 2210.0105
ILE 2220.0115
TYR 2230.0110
ARG 2240.0129
VAL 2250.0147
LEU 2260.0146
ALA 2270.0146
GLY 2280.0148
ASN 2290.0144
PRO 2300.0122
ALA 2310.0124
LYS 2320.0128
HIS 2330.0112
ASP 2340.0114
LEU 2350.0100
ASP 2360.0114
ILE 2370.0073
ILE 2380.0080
LYS 2390.0066
PRO 2400.0043
THR 2410.0045
VAL 2420.0053
ILE 2430.0045
SER 2440.0051
HIS 2450.0050
ARG 2460.0057
LEU 2470.0062
HIS 2480.0072
PHE 2490.0074
PRO 2500.0100
GLU 2510.0113
GLY 2520.0107
GLY 2530.0084
SER 2540.0056
LEU 2550.0044
ALA 2560.0073
ALA 2570.0073
LEU 2580.0049
THR 2590.0073
ALA 2600.0093
HIS 2610.0064
GLN 2620.0078
ALA 2630.0077
CYS 2640.0107
HIS 2650.0119
LEU 2660.0111
PRO 2670.0099
LEU 2680.0067
GLU 2690.0072
THR 2700.0118
PHE 2710.0109
THR 2720.0100
ARG 2730.0160
HIS 2740.0222
ARG 2750.0267
GLN 2760.0306
PRO 2770.0241
ARG 2780.0278
GLY 2790.0254
TRP 2800.0243
GLU 2810.0243
GLN 2820.0198
LEU 2830.0164
GLU 2840.0202
GLN 2850.0178
CYS 2860.0132
GLY 2870.0135
TYR 2880.0100
PRO 2890.0115
VAL 2900.0134
GLN 2910.0122
ARG 2920.0080
LEU 2930.0093
VAL 2940.0094
ALA 2950.0095
LEU 2960.0069
TYR 2970.0065
LEU 2980.0084
ALA 2990.0066
ALA 3000.0045
ARG 3010.0075
LEU 3020.0099
SER 3030.0162
TRP 3040.0200
ASN 3050.0218
GLN 3060.0155
VAL 3070.0152
ASP 3080.0205
GLN 3090.0169
VAL 3100.0108
ILE 3110.0174
ARG 3120.0194
ASN 3130.0114
ALA 3140.0143
LEU 3150.0204
ALA 3160.0161
SER 3170.0150
PRO 3180.0242
GLY 3190.0280
SER 3200.0371
GLY 3210.0425
GLY 3220.0458
ASP 3230.0464
LEU 3240.0389
GLY 3250.0374
GLU 3260.0429
ALA 3270.0431
ILE 3280.0347
ARG 3290.0350
GLU 3300.0415
GLN 3310.0414
PRO 3320.0343
GLU 3330.0371
GLN 3340.0401
ALA 3350.0326
ARG 3360.0286
LEU 3370.0317
ALA 3380.0289
LEU 3390.0213
THR 3400.0238
LEU 3410.0238
LEU 3420.0189
ALA 3430.0161
ALA 3440.0204
ALA 3450.0149
GLU 3460.0111
SER 3470.0123
GLU 3480.0144
ARG 3490.0098
PHE 3500.0087
VAL 3510.0119
ARG 3520.0124
GLN 3530.0089
GLY 3540.0114
THR 3550.0153
GLY 3560.0161
ASN 3570.0128
ASP 3580.0150
GLU 3590.0144
ALA 3600.0142
GLY 3610.0120
ALA 3620.0095
ALA 3630.0081
ASN 3640.0084
ALA 3650.0061
ASP 3660.0056
VAL 3670.0047
VAL 3680.0049
SER 3690.0054
LEU 3700.0058
THR 3710.0064
CYS 3720.0067
PRO 3730.0091
VAL 3740.0093
ALA 3750.0097
ALA 3760.0093
GLY 3770.0122
GLU 3780.0090
CYS 3790.0068
ALA 3800.0057
GLY 3810.0052
PRO 3820.0050
ALA 3830.0054
ASP 3840.0055
SER 3850.0050
GLY 3860.0063
ASP 3870.0072
ALA 3880.0056
LEU 3890.0031
LEU 3900.0040
GLU 3910.0051
ARG 3920.0060
ASN 3930.0083
TYR 3940.0093
PRO 3950.0102
THR 3960.0101
GLY 3970.0101
ALA 3980.0100
GLU 3990.0103
PHE 4000.0107
LEU 4010.0104
GLY 4020.0107
ASP 4030.0107
GLY 4040.0100
GLY 4050.0099
ASP 4060.0101
VAL 4070.0094
SER 4080.0088
PHE 4090.0081
SER 4100.0074
THR 4110.0064
ARG 4120.0061
GLY 4130.0067
THR 4140.0077
GLN 4150.0079
ASN 4160.0086
TRP 4170.0086
THR 4180.0084
VAL 4190.0085
GLU 4200.0092
ARG 4210.0097
LEU 4220.0096
LEU 4230.0100
GLN 4240.0107
ALA 4250.0107
HIS 4260.0108
ARG 4270.0114
GLN 4280.0115
LEU 4290.0109
GLU 4300.0113
GLU 4310.0115
ARG 4320.0110
GLY 4330.0130
TYR 4340.0119
VAL 4350.0113
PHE 4360.0102
VAL 4370.0106
GLY 4380.0095
TYR 4390.0087
HIS 4400.0087
GLY 4410.0082
THR 4420.0083
PHE 4430.0079
LEU 4440.0080
GLU 4450.0087
ALA 4460.0090
ALA 4470.0089
GLN 4480.0092
SER 4490.0091
ILE 4500.0094
VAL 4510.0097
PHE 4520.0099
GLY 4530.0098
GLY 4540.0098
VAL 4550.0097
ARG 4560.0100
ALA 4570.0122
ARG 4580.0107
SER 4590.0102
GLN 4600.0098
ASP 4610.0095
LEU 4620.0121
ASP 4630.0156
ALA 4640.0172
ILE 4650.0182
TRP 4660.0153
ARG 4670.0139
GLY 4680.0131
PHE 4690.0112
TYR 4700.0101
ILE 4710.0095
ALA 4720.0089
GLY 4730.0094
ASP 4740.0081
PRO 4750.0068
ALA 4760.0064
LEU 4770.0080
ALA 4780.0079
TYR 4790.0066
GLY 4800.0069
TYR 4810.0078
ALA 4820.0070
GLN 4830.0062
ASP 4840.0072
GLN 4850.0079
GLU 4860.0091
PRO 4870.0084
ASP 4880.0100
ALA 4890.0125
ARG 4900.0111
GLY 4910.0089
ARG 4920.0078
ILE 4930.0064
ARG 4940.0070
ASN 4950.0062
GLY 4960.0071
ALA 4970.0071
LEU 4980.0075
LEU 4990.0087
ARG 5000.0094
VAL 5010.0101
TYR 5020.0109
VAL 5030.0116
PRO 5040.0125
ARG 5050.0141
SER 5060.0159
SER 5070.0153
LEU 5080.0143
PRO 5090.0188
GLY 5100.0189
PHE 5110.0163
TYR 5120.0175
ARG 5130.0180
THR 5140.0195
SER 5150.0195
LEU 5160.0208
THR 5170.0188
LEU 5180.0180
ALA 5190.0187
ALA 5200.0216
PRO 5210.0237
GLU 5220.0250
ALA 5230.0224
ALA 5240.0230
GLY 5250.0253
GLU 5260.0246
VAL 5270.0225
GLU 5280.0247
ARG 5290.0266
LEU 5300.0246
ILE 5310.0238
GLY 5320.0270
HIS 5330.0260
PRO 5340.0250
LEU 5350.0218
PRO 5360.0199
LEU 5370.0177
ARG 5380.0187
LEU 5390.0180
ASP 5400.0167
ALA 5410.0163
ILE 5420.0162
THR 5430.0148
GLY 5440.0151
PRO 5450.0156
GLU 5460.0154
GLU 5470.0170
GLU 5480.0182
GLY 5490.0153
GLY 5500.0138
ARG 5510.0118
LEU 5520.0126
GLU 5530.0111
THR 5540.0120
ILE 5550.0128
LEU 5560.0136
GLY 5570.0135
TRP 5580.0134
PRO 5590.0151
LEU 5600.0139
ALA 5610.0111
GLU 5620.0114
ARG 5630.0119
THR 5640.0112
VAL 5650.0108
VAL 5660.0101
ILE 5670.0098
PRO 5680.0091
SER 5690.0083
ALA 5700.0073
ILE 5710.0064
PRO 5720.0054
THR 5730.0052
ASP 5740.0041
PRO 5750.0045
ARG 5760.0035
ASN 5770.0038
VAL 5780.0045
GLY 5790.0052
GLY 5800.0049
ASP 5810.0057
LEU 5820.0054
ASP 5830.0047
PRO 5840.0057
SER 5850.0043
SER 5860.0041
ILE 5870.0059
PRO 5880.0063
ASP 5890.0074
LYS 5900.0083
GLU 5910.0083
GLN 5920.0084
ALA 5930.0086
ILE 5940.0093
SER 5950.0091
ALA 5960.0098
LEU 5970.0097
PRO 5980.0121
ASP 5990.0137
TYR 6000.0155
ALA 6010.0200
SER 6020.0219
GLN 6030.0259
PRO 6040.0273
GLY 6050.0267
LYS 6060.0399

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.