CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1DQZ_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

<R2> analysis for 240220092131172147

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0697
ARG 10.0353
PRO 20.0384
GLY 30.0248
LEU 40.0230
PRO 50.0221
VAL 60.0190
GLU 70.0154
TYR 80.0126
LEU 90.0084
GLN 100.0043
VAL 110.0012
PRO 120.0062
SER 130.0123
ALA 140.0204
SER 150.0227
MET 160.0222
GLY 170.0232
ARG 180.0173
ASP 190.0074
ILE 200.0061
LYS 210.0062
VAL 220.0068
GLN 230.0110
PHE 240.0118
GLN 250.0139
GLY 260.0147
GLY 270.0138
GLY 280.0132
PRO 290.0114
HIS 300.0088
ALA 310.0073
VAL 320.0063
TYR 330.0057
LEU 340.0067
LEU 350.0074
ASP 360.0085
GLY 370.0134
LEU 380.0153
ARG 390.0217
ALA 400.0132
GLN 410.0138
ASP 420.0106
ASP 430.0114
TYR 440.0119
ASN 450.0112
GLY 460.0117
TRP 470.0099
ASP 480.0124
ILE 490.0141
ASN 500.0113
THR 510.0099
PRO 520.0106
ALA 530.0100
PHE 540.0121
GLU 550.0119
GLU 560.0080
TYR 570.0093
TYR 580.0135
GLN 590.0142
SER 600.0106
GLY 610.0117
LEU 620.0095
SER 630.0107
VAL 640.0097
ILE 650.0082
MET 660.0080
PRO 670.0050
VAL 680.0072
GLY 690.0099
GLY 700.0112
GLN 710.0182
SER 720.0183
SER 730.0112
PHE 740.0061
TYR 750.0039
THR 760.0052
ASP 770.0141
TRP 780.0183
TYR 790.0273
GLN 800.0355
PRO 810.0395
SER 820.0379
GLN 830.0472
SER 840.0504
ASN 850.0512
GLY 860.0571
GLN 870.0486
ASN 880.0540
TYR 890.0401
THR 900.0322
TYR 910.0204
LYS 920.0171
TRP 930.0074
GLU 940.0055
THR 950.0103
PHE 960.0066
LEU 970.0019
THR 980.0048
ARG 990.0100
GLU 1000.0086
MET 1010.0035
PRO 1020.0066
ALA 1030.0095
TRP 1040.0083
LEU 1050.0089
GLN 1060.0116
ALA 1070.0138
ASN 1080.0131
LYS 1090.0133
GLY 1100.0144
VAL 1110.0099
SER 1120.0093
PRO 1130.0063
THR 1140.0054
GLY 1150.0053
ASN 1160.0049
ALA 1170.0044
ALA 1180.0042
VAL 1190.0058
GLY 1200.0060
LEU 1210.0080
SER 1220.0104
MET 1230.0092
SER 1240.0075
GLY 1250.0076
GLY 1260.0074
SER 1270.0054
ALA 1280.0050
LEU 1290.0052
ILE 1300.0053
LEU 1310.0032
ALA 1320.0034
ALA 1330.0052
TYR 1340.0053
TYR 1350.0019
PRO 1360.0024
GLN 1370.0031
GLN 1380.0026
PHE 1390.0023
PRO 1400.0019
TYR 1410.0037
ALA 1420.0027
ALA 1430.0037
SER 1440.0036
LEU 1450.0021
SER 1460.0061
GLY 1470.0101
PHE 1480.0139
LEU 1490.0110
ASN 1500.0157
PRO 1510.0149
SER 1520.0170
GLU 1530.0248
SER 1540.0309
TRP 1550.0303
TRP 1560.0234
PRO 1570.0151
THR 1580.0193
LEU 1590.0257
ILE 1600.0192
GLY 1610.0215
LEU 1620.0342
ALA 1630.0351
MET 1640.0309
ASN 1650.0417
ASP 1660.0506
SER 1670.0411
GLY 1680.0441
GLY 1690.0466
TYR 1700.0354
ASN 1710.0306
ALA 1720.0183
ASN 1730.0197
SER 1740.0265
MET 1750.0157
TRP 1760.0089
GLY 1770.0121
PRO 1780.0045
SER 1790.0089
SER 1800.0135
ASP 1810.0108
PRO 1820.0163
ALA 1830.0101
TRP 1840.0087
LYS 1850.0126
ARG 1860.0100
ASN 1870.0069
ASP 1880.0114
PRO 1890.0103
MET 1900.0117
VAL 1910.0125
GLN 1920.0103
ILE 1930.0092
PRO 1940.0115
ARG 1950.0099
LEU 1960.0077
VAL 1970.0099
ALA 1980.0119
ASN 1990.0098
ASN 2000.0091
THR 2010.0063
ARG 2020.0053
ILE 2030.0057
TRP 2040.0045
VAL 2050.0048
TYR 2060.0061
CYS 2070.0092
GLY 2080.0196
ASN 2090.0286
GLY 2100.0371
THR 2110.0497
PRO 2120.0530
SER 2130.0575
ASP 2140.0697
LEU 2150.0438
GLY 2160.0507
GLY 2170.0501
ASP 2180.0668
ASN 2190.0697
ILE 2200.0688
PRO 2210.0591
ALA 2220.0460
LYS 2230.0445
PHE 2240.0422
LEU 2250.0307
GLU 2260.0225
GLY 2270.0192
LEU 2280.0174
THR 2290.0131
LEU 2300.0083
ARG 2310.0066
THR 2320.0088
ASN 2330.0034
GLN 2340.0010
THR 2350.0061
PHE 2360.0063
ARG 2370.0050
ASP 2380.0073
THR 2390.0086
TYR 2400.0082
ALA 2410.0098
ALA 2420.0118
ASP 2430.0127
GLY 2440.0134
GLY 2450.0107
ARG 2460.0111
ASN 2470.0085
GLY 2480.0068
VAL 2490.0093
PHE 2500.0071
ASN 2510.0129
PHE 2520.0149
PRO 2530.0308
PRO 2540.0403
ASN 2550.0409
GLY 2560.0323
THR 2570.0297
HIS 2580.0241
SER 2590.0197
TRP 2600.0096
PRO 2610.0150
TYR 2620.0151
TRP 2630.0047
ASN 2640.0036
GLU 2650.0118
GLN 2660.0076
LEU 2670.0026
VAL 2680.0039
ALA 2690.0058
MET 2700.0051
LYS 2710.0028
ALA 2720.0033
ASP 2730.0039
ILE 2740.0032
GLN 2750.0044
HIS 2760.0050
VAL 2770.0038
LEU 2780.0050
ASN 2790.0079
GLY 2800.0080

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.