CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  4CDB_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

<R2> analysis for 240221152119307497

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1070
MET 10.0352
ALA 20.0086
PRO 30.0209
PRO 40.0169
ALA 50.0190
SER 60.0231
PRO 70.0210
PRO 80.0183
ALA 90.0128
SER 100.0091
PRO 110.0077
LYS 120.0046
THR 130.0053
PRO 140.0093
ILE 150.0095
GLU 160.0061
LYS 170.0081
LYS 180.0110
HIS 190.0088
ALA 200.0072
ASP 210.0102
GLU 220.0110
ILE 230.0086
ASP 240.0088
LYS 250.0114
TYR 260.0109
ILE 270.0086
GLN 280.0095
GLY 290.0115
LEU 300.0103
ASP 310.0108
TYR 320.0080
ASN 330.0060
LYS 340.0037
ASN 350.0025
ASN 360.0028
VAL 370.0028
LEU 380.0015
VAL 390.0026
TYR 400.0044
HIS 410.0059
GLY 420.0070
ASP 430.0086
ALA 440.0103
VAL 450.0119
THR 460.0139
ASN 470.0108
VAL 480.0084
PRO 490.0074
PRO 500.0065
ARG 510.0052
LYS 520.0056
GLY 530.0110
TYR 540.0161
LYS 550.0254
ASP 560.0296
GLY 570.0389
ASN 580.0416
GLU 590.0336
TYR 600.0252
ILE 610.0193
VAL 620.0147
VAL 630.0116
GLU 640.0090
LYS 650.0086
LYS 660.0086
LYS 670.0105
LYS 680.0099
SER 690.0100
ILE 700.0084
ASN 710.0076
GLN 720.0061
ASN 730.0041
ASN 740.0034
ALA 750.0023
ASP 760.0022
ILE 770.0020
GLN 780.0017
VAL 790.0011
VAL 800.0016
ASN 810.0030
ALA 820.0016
ILE 830.0012
SER 840.0008
SER 850.0033
LEU 860.0025
THR 870.0021
TYR 880.0034
PRO 890.0036
GLY 900.0033
ALA 910.0029
LEU 920.0024
VAL 930.0030
LYS 940.0041
ALA 950.0029
ASN 960.0036
SER 970.0032
GLU 980.0036
LEU 990.0027
VAL 1000.0025
GLU 1010.0033
ASN 1020.0027
GLN 1030.0038
PRO 1040.0032
ASP 1050.0040
VAL 1060.0048
LEU 1070.0051
PRO 1080.0069
VAL 1090.0067
LYS 1100.0057
ARG 1110.0040
ASP 1120.0047
SER 1130.0072
LEU 1140.0074
THR 1150.0093
LEU 1160.0080
SER 1170.0086
ILE 1180.0070
ASP 1190.0079
LEU 1200.0068
PRO 1210.0107
GLY 1220.0119
MET 1230.0121
THR 1240.0172
ASN 1250.0206
GLN 1260.0187
ASP 1270.0142
ASN 1280.0115
LYS 1290.0122
ILE 1300.0115
VAL 1310.0115
VAL 1320.0100
LYS 1330.0105
ASN 1340.0082
ALA 1350.0064
THR 1360.0061
LYS 1370.0059
SER 1380.0072
ASN 1390.0080
VAL 1400.0065
ASN 1410.0065
ASN 1420.0086
ALA 1430.0084
VAL 1440.0064
ASN 1450.0070
THR 1460.0091
LEU 1470.0079
VAL 1480.0047
GLU 1490.0067
ARG 1500.0086
TRP 1510.0058
ASN 1520.0031
GLU 1530.0060
LYS 1540.0079
TYR 1550.0069
ALA 1560.0035
GLN 1570.0037
ALA 1580.0080
TYR 1590.0086
PRO 1600.0101
ASN 1610.0125
VAL 1620.0106
SER 1630.0117
ALA 1640.0090
LYS 1650.0089
ILE 1660.0090
ASP 1670.0077
TYR 1680.0074
ASP 1690.0060
ASP 1700.0052
GLU 1710.0056
MET 1720.0066
ALA 1730.0065
TYR 1740.0086
SER 1750.0081
GLU 1760.0069
SER 1770.0075
GLN 1780.0075
LEU 1790.0056
ILE 1800.0051
ALA 1810.0063
LYS 1820.0056
PHE 1830.0037
GLY 1840.0035
THR 1850.0038
ALA 1860.0026
PHE 1870.0028
LYS 1880.0046
ALA 1890.0045
VAL 1900.0035
ASN 1910.0041
ASN 1920.0067
SER 1930.0067
LEU 1940.0042
ASN 1950.0058
VAL 1960.0046
ASN 1970.0066
PHE 1980.0082
GLY 1990.0094
ALA 2000.0095
ILE 2010.0089
SER 2020.0093
GLU 2030.0111
GLY 2040.0117
LYS 2050.0110
MET 2060.0085
GLN 2070.0074
GLU 2080.0039
GLU 2090.0039
VAL 2100.0027
ILE 2110.0035
SER 2120.0036
PHE 2130.0057
LYS 2140.0052
GLN 2150.0066
ILE 2160.0055
TYR 2170.0050
TYR 2180.0040
ASN 2190.0044
VAL 2200.0048
ASN 2210.0057
VAL 2220.0063
ASN 2230.0070
GLU 2240.0057
PRO 2250.0037
THR 2260.0078
ARG 2270.0068
PRO 2280.0052
SER 2290.0047
ARG 2300.0038
PHE 2310.0023
PHE 2320.0026
GLY 2330.0034
LYS 2340.0032
ALA 2350.0061
VAL 2360.0067
THR 2370.0092
LYS 2380.0102
GLU 2390.0124
GLN 2400.0109
LEU 2410.0091
GLN 2420.0114
ALA 2430.0127
LEU 2440.0100
GLY 2450.0100
VAL 2460.0083
ASN 2470.0093
ALA 2480.0090
GLU 2490.0082
ASN 2500.0064
PRO 2510.0056
PRO 2520.0043
ALA 2530.0025
TYR 2540.0018
ILE 2550.0021
SER 2560.0033
SER 2570.0034
VAL 2580.0028
ALA 2590.0026
TYR 2600.0016
GLY 2610.0036
ARG 2620.0058
GLN 2630.0041
VAL 2640.0053
TYR 2650.0031
LEU 2660.0035
LYS 2670.0015
LEU 2680.0023
SER 2690.0012
THR 2700.0030
ASN 2710.0089
SER 2720.0100
HIS 2730.0142
SER 2740.0118
THR 2750.0166
LYS 2760.0144
VAL 2770.0101
LYS 2780.0114
ALA 2790.0149
ALA 2800.0120
PHE 2810.0093
ASP 2820.0133
ALA 2830.0163
ALA 2840.0134
VAL 2850.0129
SER 2860.0177
GLY 2870.0216
LYS 2880.0247
SER 2890.0311
VAL 2900.0253
SER 2910.0312
GLY 2920.0269
ASP 2930.0218
VAL 2940.0162
GLU 2950.0124
LEU 2960.0137
THR 2970.0137
ASN 2980.0085
ILE 2990.0065
ILE 3000.0090
LYS 3010.0098
ASN 3020.0052
SER 3030.0042
SER 3040.0057
PHE 3050.0058
LYS 3060.0061
ALA 3070.0063
VAL 3080.0057
ILE 3090.0067
TYR 3100.0052
GLY 3110.0065
GLY 3120.0087
SER 3130.0096
ALA 3140.0104
LYS 3150.0117
ASP 3160.0093
GLU 3170.0076
VAL 3180.0074
GLN 3190.0097
ILE 3200.0093
ILE 3210.0104
ASP 3220.0100
GLY 3230.0111
ASN 3240.0107
LEU 3250.0100
GLY 3260.0142
ASP 3270.0152
LEU 3280.0128
ARG 3290.0161
ASP 3300.0181
ILE 3310.0142
LEU 3320.0131
LYS 3330.0164
LYS 3340.0150
GLY 3350.0126
ALA 3360.0121
THR 3370.0114
PHE 3380.0075
ASN 3390.0074
ARG 3400.0066
GLU 3410.0111
THR 3420.0092
PRO 3430.0056
GLY 3440.0039
VAL 3450.0028
PRO 3460.0004
ILE 3470.0010
ALA 3480.0017
TYR 3490.0020
THR 3500.0017
THR 3510.0015
ASN 3520.0026
PHE 3530.0034
LEU 3540.0037
LYS 3550.0062
ASP 3560.0068
ASN 3570.0055
GLU 3580.0044
LEU 3590.0028
ALA 3600.0015
VAL 3610.0015
ILE 3620.0022
LYS 3630.0029
ASN 3640.0052
ASN 3650.0067
SER 3660.0079
GLU 3670.0102
TYR 3680.0096
ILE 3690.0096
GLU 3700.0097
THR 3710.0105
THR 3720.0115
SER 3730.0147
LYS 3740.0216
ALA 3750.0263
TYR 3760.0349
THR 3770.0414
ASP 3780.0430
GLY 3790.1070
LYS 3800.0896
ILE 3810.0677
ASN 3820.0554
ILE 3830.0299
ASP 3840.0395
HIS 3850.0527
SER 3860.0830
GLY 3870.0792
GLY 3880.0721
TYR 3890.0612
VAL 3900.0461
ALA 3910.0380
GLN 3920.0235
PHE 3930.0069
ASN 3940.0311
ILE 3950.0316
SER 3960.0382
TRP 3970.0369
ASP 3980.0348
GLU 3990.0183
VAL 4000.0185
ASN 4010.0105
TYR 4020.0163
ASP 4030.0353
PRO 4040.0394
GLU 4050.0381
GLY 4060.0237
ASN 4070.0370
GLU 4080.0327
ILE 4090.0362
VAL 4100.0388
GLN 4110.0361
HIS 4120.0407
LYS 4130.0261
ASN 4140.0256
TRP 4150.0124
SER 4160.0101
GLU 4170.0096

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.