CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  3FXI tlr4  ***

<R2> analysis for 2403091700302509578

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0368
GLU 270.0343
PRO 280.0350
CYS 290.0324
VAL 300.0339
GLU 310.0347
VAL 320.0340
VAL 330.0348
PRO 340.0368
ASN 350.0348
ILE 360.0317
THR 370.0295
TYR 380.0292
GLN 390.0278
CYS 400.0276
MET 410.0264
GLU 420.0276
LEU 430.0299
ASN 440.0284
PHE 450.0256
TYR 460.0231
LYS 470.0213
ILE 480.0211
PRO 490.0252
ASP 500.0263
ASN 510.0307
LEU 520.0302
PRO 530.0314
PHE 540.0291
SER 550.0306
THR 560.0280
LYS 570.0257
ASN 580.0241
LEU 590.0230
ASP 600.0222
LEU 610.0214
SER 620.0208
PHE 630.0227
ASN 640.0229
PRO 650.0217
LEU 660.0183
ARG 670.0161
HIS 680.0130
LEU 690.0107
GLY 700.0092
SER 710.0086
TYR 720.0126
SER 730.0140
PHE 740.0168
PHE 750.0194
SER 760.0233
PHE 770.0231
PRO 780.0229
GLU 790.0249
LEU 800.0220
GLN 810.0207
VAL 820.0189
LEU 830.0170
ASP 840.0168
LEU 850.0154
SER 860.0159
ARG 870.0175
CYS 880.0177
GLU 890.0173
ILE 900.0134
GLN 910.0126
THR 920.0090
ILE 930.0061
GLU 940.0037
ASP 950.0035
GLY 960.0076
ALA 970.0089
TYR 980.0117
GLN 990.0127
SER 1000.0168
LEU 1010.0172
SER 1020.0190
HIS 1030.0208
LEU 1040.0175
SER 1050.0162
THR 1060.0139
LEU 1070.0116
ILE 1080.0114
LEU 1090.0101
THR 1100.0113
GLY 1110.0136
ASN 1120.0128
PRO 1130.0137
ILE 1140.0102
GLN 1150.0114
SER 1160.0080
LEU 1170.0039
ALA 1180.0018
LEU 1190.0048
GLY 1200.0051
ALA 1210.0037
PHE 1220.0066
SER 1230.0096
GLY 1240.0133
LEU 1250.0134
SER 1260.0164
SER 1270.0171
LEU 1280.0134
GLN 1290.0131
LYS 1300.0104
LEU 1310.0071
VAL 1320.0067
ALA 1330.0051
VAL 1340.0072
GLU 1350.0100
THR 1360.0088
ASN 1370.0105
LEU 1380.0075
ALA 1390.0100
SER 1400.0091
LEU 1410.0071
GLU 1420.0099
ASN 1430.0082
PHE 1440.0046
PRO 1450.0051
ILE 1460.0066
GLY 1470.0102
HIS 1480.0122
LEU 1490.0117
LYS 1500.0147
THR 1510.0152
LEU 1520.0114
LYS 1530.0115
GLU 1540.0077
LEU 1550.0044
ASN 1560.0028
VAL 1570.0024
ALA 1580.0050
HIS 1590.0087
ASN 1600.0086
LEU 1610.0111
ILE 1620.0099
GLN 1630.0125
SER 1640.0125
PHE 1650.0110
LYS 1660.0129
LEU 1670.0112
PRO 1680.0117
GLU 1690.0145
TYR 1700.0127
PHE 1710.0121
SER 1720.0156
ASN 1730.0153
LEU 1740.0127
THR 1750.0156
ASN 1760.0144
LEU 1770.0108
GLU 1780.0098
HIS 1790.0062
LEU 1800.0039
ASP 1810.0010
LEU 1820.0041
SER 1830.0052
SER 1840.0082
ASN 1850.0091
LYS 1860.0119
ILE 1870.0114
GLN 1880.0139
SER 1890.0146
ILE 1900.0142
TYR 1910.0170
CYS 1920.0178
THR 1930.0180
ASP 1940.0148
LEU 1950.0146
ARG 1960.0173
VAL 1970.0155
LEU 1980.0149
HIS 1990.0182
GLN 2000.0189
MET 2010.0173
PRO 2020.0189
LEU 2030.0176
LEU 2040.0143
ASN 2050.0123
LEU 2060.0094
SER 2070.0062
LEU 2080.0049
ASP 2090.0031
LEU 2100.0058
SER 2110.0061
LEU 2120.0085
ASN 2130.0097
PRO 2140.0122
MET 2150.0123
ASN 2160.0147
PHE 2170.0155
ILE 2180.0146
GLN 2190.0173
PRO 2200.0179
GLY 2210.0180
ALA 2220.0163
PHE 2230.0145
LYS 2240.0168
GLU 2250.0167
ILE 2260.0141
ARG 2270.0127
LEU 2280.0099
HIS 2290.0088
LYS 2300.0061
LEU 2310.0056
THR 2320.0043
LEU 2330.0060
ARG 2340.0058
ASN 2350.0082
ASN 2360.0093
PHE 2370.0108
ASP 2380.0126
SER 2390.0131
LEU 2400.0115
ASN 2410.0134
VAL 2420.0134
MET 2430.0113
LYS 2440.0118
THR 2450.0138
CYS 2460.0125
ILE 2470.0111
GLN 2480.0135
GLY 2490.0142
LEU 2500.0120
ALA 2510.0137
GLY 2520.0144
LEU 2530.0123
GLU 2540.0116
VAL 2550.0088
HIS 2560.0081
ARG 2570.0058
LEU 2580.0054
VAL 2590.0037
LEU 2600.0049
GLY 2610.0053
GLU 2620.0066
PHE 2630.0073
ARG 2640.0081
ASN 2650.0094
GLU 2660.0096
GLY 2670.0110
ASN 2680.0101
LEU 2690.0103
GLU 2700.0113
LYS 2710.0100
PHE 2720.0082
ASP 2730.0081
LYS 2740.0071
SER 2750.0093
ALA 2760.0087
LEU 2770.0077
GLU 2780.0093
GLY 2790.0107
LEU 2800.0088
CYS 2810.0100
ASN 2820.0119
LEU 2830.0106
THR 2840.0102
ILE 2850.0081
GLU 2860.0076
GLU 2870.0052
PHE 2880.0040
ARG 2890.0025
LEU 2900.0032
ALA 2910.0033
TYR 2920.0050
LEU 2930.0063
ASP 2940.0081
TYR 2950.0082
TYR 2960.0072
LEU 2970.0055
ASP 2980.0052
ASP 2990.0041
ILE 3000.0026
ILE 3010.0022
ASP 3020.0040
LEU 3030.0048
PHE 3040.0039
ASN 3050.0046
CYS 3060.0061
LEU 3070.0050
THR 3080.0045
ASN 3090.0060
VAL 3100.0055
SER 3110.0054
SER 3120.0041
PHE 3130.0025
SER 3140.0012
LEU 3150.0017
VAL 3160.0027
SER 3170.0044
VAL 3180.0046
THR 3190.0056
ILE 3200.0045
GLU 3210.0057
ARG 3220.0055
VAL 3230.0043
LYS 3240.0043
ASP 3250.0029
PHE 3260.0025
SER 3270.0027
TYR 3280.0012
ASN 3290.0026
PHE 3300.0029
GLY 3310.0043
TRP 3320.0039
GLN 3330.0050
HIS 3340.0040
LEU 3350.0020
GLU 3360.0008
LEU 3370.0013
VAL 3380.0022
ASN 3390.0043
CYS 3400.0044
LYS 3410.0059
PHE 3420.0054
GLY 3430.0073
GLN 3440.0072
PHE 3450.0062
PRO 3460.0048
THR 3470.0054
LEU 3480.0043
LYS 3490.0049
LEU 3500.0043
LYS 3510.0060
SER 3520.0062
LEU 3530.0052
LYS 3540.0063
ARG 3550.0050
LEU 3560.0034
THR 3570.0020
PHE 3580.0022
THR 3590.0027
SER 3600.0039
ASN 3610.0044
LYS 3620.0061
GLY 3630.0072
GLY 3640.0081
ASN 3650.0089
ALA 3660.0090
PHE 3670.0083
SER 3680.0093
GLU 3690.0094
VAL 3700.0078
ASP 3710.0079
LEU 3720.0071
PRO 3730.0089
SER 3740.0084
LEU 3750.0076
GLU 3760.0081
PHE 3770.0062
LEU 3780.0049
ASP 3790.0030
LEU 3800.0035
SER 3810.0031
ARG 3820.0042
ASN 3830.0056
GLY 3840.0075
LEU 3850.0077
SER 3860.0095
PHE 3870.0105
LYS 3880.0132
GLY 3890.0134
CYS 3900.0116
CYS 3910.0118
SER 3920.0131
GLN 3930.0127
SER 3940.0132
ASP 3950.0106
PHE 3960.0091
GLY 3970.0106
THR 3980.0107
THR 3990.0128
SER 4000.0118
LEU 4010.0096
LYS 4020.0096
TYR 4030.0071
LEU 4040.0059
ASP 4050.0036
LEU 4060.0045
SER 4070.0033
PHE 4080.0047
ASN 4090.0066
GLY 4100.0091
VAL 4110.0107
ILE 4120.0101
THR 4130.0126
MET 4140.0127
SER 4150.0154
SER 4160.0153
ASN 4170.0144
PHE 4180.0135
LEU 4190.0158
GLY 4200.0154
LEU 4210.0129
GLU 4220.0145
GLN 4230.0134
LEU 4240.0108
GLU 4250.0104
HIS 4260.0076
LEU 4270.0061
ASP 4280.0033
PHE 4290.0042
GLN 4300.0026
HIS 4310.0051
SER 4320.0067
ASN 4330.0092
LEU 4340.0094
LYS 4350.0123
GLN 4360.0139
MET 4370.0118
SER 4380.0134
GLU 4390.0160
PHE 4400.0163
SER 4410.0148
VAL 4420.0132
PHE 4430.0124
LEU 4440.0153
SER 4450.0157
LEU 4460.0135
ARG 4470.0156
ASN 4480.0145
LEU 4490.0115
ILE 4500.0109
TYR 4510.0078
LEU 4520.0057
ASP 4530.0026
ILE 4540.0034
SER 4550.0022
HIS 4560.0054
THR 4570.0065
HIS 4580.0087
THR 4590.0088
ARG 4600.0103
VAL 4610.0096
ALA 4620.0126
PHE 4630.0136
ASN 4640.0130
GLY 4650.0144
ILE 4660.0119
PHE 4670.0113
ASN 4680.0146
GLY 4690.0154
LEU 4700.0130
SER 4710.0154
SER 4720.0150
LEU 4730.0117
GLU 4740.0113
VAL 4750.0082
LEU 4760.0054
LYS 4770.0024
MET 4780.0014
ALA 4790.0027
GLY 4800.0060
ASN 4810.0065
SER 4820.0077
PHE 4830.0083
GLN 4840.0114
GLU 4850.0113
ASN 4860.0082
PHE 4870.0066
LEU 4880.0048
PRO 4890.0081
ASP 4900.0101
ILE 4910.0102
PHE 4920.0102
THR 4930.0134
GLU 4940.0150
LEU 4950.0130
ARG 4960.0156
ASN 4970.0156
LEU 4980.0121
THR 4990.0125
PHE 5000.0095
LEU 5010.0062
ASP 5020.0042
LEU 5030.0020
SER 5040.0052
GLN 5050.0074
CYS 5060.0058
GLN 5070.0085
LEU 5080.0055
GLU 5090.0063
GLN 5100.0041
LEU 5110.0023
SER 5120.0056
PRO 5130.0067
THR 5140.0099
ALA 5150.0082
PHE 5160.0093
ASN 5170.0125
SER 5180.0147
LEU 5190.0134
SER 5200.0166
SER 5210.0167
LEU 5220.0133
GLN 5230.0145
VAL 5240.0119
LEU 5250.0086
ASN 5260.0075
MET 5270.0060
SER 5280.0092
HIS 5290.0107
ASN 5300.0084
ASN 5310.0097
PHE 5320.0079
PHE 5330.0100
SER 5340.0079
LEU 5350.0081
ASP 5360.0066
THR 5370.0092
PHE 5380.0088
PRO 5390.0082
TYR 5400.0107
LYS 5410.0135
CYS 5420.0154
LEU 5430.0147
ASN 5440.0185
SER 5450.0185
LEU 5460.0155
GLN 5470.0174
VAL 5480.0150
LEU 5490.0121
ASP 5500.0118
TYR 5510.0108
SER 5520.0137
LEU 5530.0146
ASN 5540.0123
HIS 5550.0138
ILE 5560.0123
MET 5570.0143
THR 5580.0114
SER 5590.0087
LYS 5600.0052
LYS 5610.0060
GLN 5620.0100
GLU 5630.0110
LEU 5640.0129
GLN 5650.0159
HIS 5660.0145
PHE 5670.0153
PRO 5680.0175
SER 5690.0214
SER 5700.0214
LEU 5710.0188
ALA 5720.0211
PHE 5730.0192
LEU 5740.0166
ASN 5750.0165
LEU 5760.0159
THR 5770.0186
GLN 5780.0192
ASN 5790.0175
ASP 5800.0186
PHE 5810.0186
ALA 5820.0193
CYS 5830.0228
THR 5840.0228
CYS 5850.0216
GLU 5860.0181
HIS 5870.0166
GLN 5880.0191
SER 5890.0163
PHE 5900.0154
LEU 5910.0191
GLN 5920.0208
TRP 5930.0187
ILE 5940.0198
LYS 5950.0238
ASP 5960.0235
GLN 5970.0229
ARG 5980.0245
GLN 5990.0255
LEU 6000.0219
LEU 6010.0211
VAL 6020.0223
GLU 6030.0242
VAL 6040.0254
GLU 6050.0279
ARG 6060.0246
MET 6070.0228
GLU 6080.0252
CYS 6090.0243
ALA 6100.0238
THR 6110.0239
PRO 6120.0275
SER 6130.0305
ASP 6140.0331
LYS 6150.0309
GLN 6160.0291
GLY 6170.0295
MET 6180.0301
PRO 6190.0279
VAL 6200.0248
LEU 6210.0265
SER 6220.0297
LEU 6230.0290
ASN 6240.0305
ILE 6250.0270
THR 6260.0285
CYS 6270.0256

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.