CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  TRANSPORT PROTEIN/IMMUNE SYSTEM 05-JUL-18 6DZZ  ***

<R2> analysis for 2403211529024168498

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0790
GLU 780.0790
ARG 790.0681
GLU 800.0473
THR 810.0381
TRP 820.0252
GLY 830.0238
LYS 840.0225
LYS 850.0187
VAL 860.0143
ASP 870.0138
PHE 880.0124
LEU 890.0104
LEU 900.0085
SER 910.0080
VAL 920.0068
ILE 930.0057
GLY 940.0054
TYR 950.0047
ALA 960.0040
VAL 970.0034
ASP 980.0020
LEU 990.0011
GLY 1000.0014
ASN 1010.0026
VAL 1020.0024
TRP 1030.0018
ARG 1040.0023
PHE 1050.0033
PRO 1060.0037
TYR 1070.0037
ILE 1080.0042
CYS 1090.0051
TYR 1100.0051
GLN 1110.0054
ASN 1120.0064
GLY 1130.0068
GLY 1140.0067
GLY 1150.0075
ALA 1160.0077
PHE 1170.0066
LEU 1180.0068
LEU 1190.0077
PRO 1200.0070
TYR 1210.0059
THR 1220.0068
ILE 1230.0070
MET 1240.0057
ALA 1250.0049
ILE 1260.0059
PHE 1270.0057
GLY 1280.0044
GLY 1290.0035
ILE 1300.0039
PRO 1310.0034
LEU 1320.0019
PHE 1330.0022
TYR 1340.0029
MET 1350.0014
GLU 1360.0016
LEU 1370.0032
ALA 1380.0033
LEU 1390.0031
GLY 1400.0044
GLN 1410.0056
TYR 1420.0052
HIS 1430.0057
ARG 1440.0067
ASN 1450.0068
GLY 1460.0061
CYS 1470.0049
ILE 1480.0065
SER 1490.0069
ILE 1500.0053
TRP 1510.0054
ARG 1520.0069
LYS 1530.0060
ILE 1540.0045
CYS 1550.0057
PRO 1560.0076
ILE 1570.0082
PHE 1580.0065
LYS 1590.0071
GLY 1600.0075
ILE 1610.0056
GLY 1620.0057
TYR 1630.0071
ALA 1640.0061
ILE 1650.0047
CYS 1660.0058
ILE 1670.0062
ILE 1680.0047
ALA 1690.0042
PHE 1700.0051
TYR 1710.0047
ILE 1720.0033
ALA 1730.0038
SER 1740.0040
TYR 1750.0031
TYR 1760.0020
ASN 1770.0027
THR 1780.0024
ILE 1790.0013
MET 1800.0015
ALA 1810.0021
TRP 1820.0012
ALA 1830.0006
LEU 1840.0015
TYR 1850.0013
TYR 1860.0010
LEU 1870.0015
ILE 1880.0022
SER 1890.0018
SER 1900.0023
PHE 1910.0031
THR 1920.0032
ASP 1930.0027
GLN 1940.0036
LEU 1950.0028
PRO 1960.0030
TRP 1970.0022
THR 1980.0031
SER 1990.0039
CYS 2000.0033
LYS 2010.0056
ASN 2020.0030
SER 2030.0036
TRP 2040.0029
ASN 2050.0015
THR 2060.0017
GLY 2070.0032
ASN 2080.0044
CYS 2090.0035
THR 2100.0041
ASN 2110.0036
TYR 2120.0044
PHE 2130.0034
SER 2140.0041
GLU 2150.0055
ASP 2160.0075
ASN 2170.0070
ILE 2180.0054
THR 2190.0051
TRP 2200.0046
THR 2210.0060
LEU 2220.0052
HIS 2230.0044
SER 2240.0038
THR 2250.0027
SER 2260.0024
PRO 2270.0023
ALA 2280.0019
GLU 2290.0021
GLU 2300.0020
PHE 2310.0020
TYR 2320.0020
THR 2330.0020
ARG 2340.0019
HIS 2350.0021
VAL 2360.0022
LEU 2370.0021
GLN 2380.0023
ILE 2390.0028
HIS 2400.0028
ARG 2410.0025
SER 2420.0043
LYS 2430.0054
GLY 2440.0058
LEU 2450.0061
GLN 2460.0069
ASP 2470.0061
LEU 2480.0052
GLY 2490.0046
GLY 2500.0043
ILE 2510.0038
SER 2520.0026
TRP 2530.0028
GLN 2540.0024
LEU 2550.0024
ALA 2560.0034
LEU 2570.0034
CYS 2580.0029
ILE 2590.0033
MET 2600.0044
LEU 2610.0042
ILE 2620.0040
PHE 2630.0051
THR 2640.0061
VAL 2650.0057
ILE 2660.0057
TYR 2670.0072
PHE 2680.0080
SER 2690.0073
ILE 2700.0075
TRP 2710.0093
LYS 2720.0098
GLY 2730.0083
VAL 2740.0091
LYS 2750.0080
THR 2760.0077
SER 2770.0082
GLY 2780.0097
LYS 2790.0100
VAL 2800.0087
VAL 2810.0070
TRP 2820.0079
VAL 2830.0074
THR 2840.0058
ALA 2850.0048
THR 2860.0056
PHE 2870.0061
PRO 2880.0046
TYR 2890.0047
ILE 2900.0055
ILE 2910.0050
LEU 2920.0040
SER 2930.0050
VAL 2940.0047
LEU 2950.0039
LEU 2960.0048
VAL 2970.0054
ARG 2980.0041
GLY 2990.0043
ALA 3000.0052
THR 3010.0047
LEU 3020.0041
PRO 3030.0044
GLY 3040.0048
ALA 3050.0053
TRP 3060.0069
ARG 3070.0067
GLY 3080.0059
VAL 3090.0068
LEU 3100.0081
PHE 3110.0074
TYR 3120.0069
LEU 3130.0082
LYS 3140.0093
PRO 3150.0095
ASN 3160.0104
TRP 3170.0099
GLN 3180.0108
LYS 3190.0104
LEU 3200.0090
LEU 3210.0092
GLU 3220.0095
THR 3230.0092
GLY 3240.0078
VAL 3250.0070
TRP 3260.0064
ILE 3270.0056
ASP 3280.0051
ALA 3290.0048
ALA 3300.0043
ALA 3310.0035
GLN 3320.0031
ILE 3330.0030
PHE 3340.0020
PHE 3350.0013
SER 3360.0018
LEU 3370.0020
GLY 3380.0010
PRO 3390.0003
GLY 3400.0017
PHE 3410.0022
GLY 3420.0028
VAL 3430.0030
LEU 3440.0028
LEU 3450.0036
ALA 3460.0049
PHE 3470.0049
ALA 3480.0051
SER 3490.0061
TYR 3500.0071
ASN 3510.0077
LYS 3520.0086
PHE 3530.0084
ASN 3540.0085
ASN 3550.0084
ASN 3560.0082
CYS 3570.0064
TYR 3580.0065
GLN 3590.0081
ASP 3600.0074
ALA 3610.0055
LEU 3620.0064
VAL 3630.0074
THR 3640.0058
SER 3650.0049
VAL 3660.0062
VAL 3670.0061
ASN 3680.0045
CYS 3690.0052
MET 3700.0057
THR 3710.0049
SER 3720.0043
PHE 3730.0055
VAL 3740.0052
SER 3750.0041
GLY 3760.0045
PHE 3770.0053
VAL 3780.0044
ILE 3790.0038
PHE 3800.0047
THR 3810.0049
VAL 3820.0036
LEU 3830.0038
GLY 3840.0045
TYR 3850.0034
MET 3860.0030
ALA 3870.0043
GLU 3880.0039
MET 3890.0029
ARG 3900.0033
ASN 3910.0043
GLU 3920.0053
ASP 3930.0061
VAL 3940.0057
SER 3950.0062
GLU 3960.0060
VAL 3970.0048
ALA 3980.0052
LYS 3990.0055
ASP 4000.0050
ALA 4010.0043
GLY 4020.0038
PRO 4030.0028
SER 4040.0024
LEU 4050.0028
LEU 4060.0019
PHE 4070.0014
ILE 4080.0019
THR 4090.0023
TYR 4100.0016
ALA 4110.0012
GLU 4120.0015
ALA 4130.0019
ILE 4140.0015
ALA 4150.0013
ASN 4160.0019
MET 4170.0022
PRO 4180.0023
ALA 4190.0023
SER 4200.0015
THR 4210.0018
PHE 4220.0025
PHE 4230.0023
ALA 4240.0016
ILE 4250.0023
ILE 4260.0029
PHE 4270.0023
PHE 4280.0017
LEU 4290.0025
MET 4300.0032
LEU 4310.0021
ILE 4320.0025
THR 4330.0035
LEU 4340.0031
GLY 4350.0023
LEU 4360.0034
ASP 4370.0037
SER 4380.0025
THR 4390.0033
PHE 4400.0046
ALA 4410.0043
GLY 4420.0034
LEU 4430.0048
GLU 4440.0052
GLY 4450.0043
VAL 4460.0055
ILE 4470.0069
THR 4480.0072
ALA 4490.0066
VAL 4500.0082
LEU 4510.0094
ASP 4520.0094
GLU 4530.0104
PHE 4540.0122
PRO 4550.0129
HIS 4560.0148
VAL 4570.0142
TRP 4580.0128
ALA 4590.0144
LYS 4600.0147
ARG 4610.0130
ARG 4620.0115
GLU 4630.0116
ARG 4640.0113
PHE 4650.0101
VAL 4660.0086
LEU 4670.0088
ALA 4680.0091
VAL 4690.0076
VAL 4700.0066
ILE 4710.0075
THR 4720.0074
CYS 4730.0060
PHE 4740.0057
PHE 4750.0067
GLY 4760.0061
SER 4770.0051
LEU 4780.0052
VAL 4790.0055
THR 4800.0043
LEU 4810.0039
THR 4820.0038
PHE 4830.0032
GLY 4840.0040
GLY 4850.0035
ALA 4860.0036
TYR 4870.0047
VAL 4880.0047
VAL 4890.0038
LYS 4900.0044
LEU 4910.0052
LEU 4920.0044
GLU 4930.0038
GLU 4940.0051
TYR 4950.0055
ALA 4960.0048
THR 4970.0037
GLY 4980.0045
PRO 4990.0054
ALA 5000.0050
VAL 5010.0036
LEU 5020.0042
THR 5030.0051
VAL 5040.0042
ALA 5050.0030
LEU 5060.0043
ILE 5070.0046
GLU 5080.0031
ALA 5090.0029
VAL 5100.0044
ALA 5110.0042
VAL 5120.0025
SER 5130.0028
TRP 5140.0046
PHE 5150.0046
TYR 5160.0032
GLY 5170.0023
ILE 5180.0014
THR 5190.0009
GLN 5200.0011
PHE 5210.0011
CYS 5220.0023
ARG 5230.0031
ASP 5240.0036
VAL 5250.0042
LYS 5260.0054
GLU 5270.0061
MET 5280.0067
LEU 5290.0071
GLY 5300.0075
PHE 5310.0074
SER 5320.0063
PRO 5330.0056
GLY 5340.0067
TRP 5350.0068
PHE 5360.0071
TRP 5370.0055
ARG 5380.0046
ILE 5390.0056
CYS 5400.0049
TRP 5410.0034
VAL 5420.0043
ALA 5430.0059
ILE 5440.0061
SER 5450.0048
PRO 5460.0051
LEU 5470.0066
PHE 5480.0063
LEU 5490.0055
LEU 5500.0064
PHE 5510.0073
ILE 5520.0068
ILE 5530.0070
CYS 5540.0079
SER 5550.0082
PHE 5560.0077
LEU 5570.0087
MET 5580.0098
SER 5590.0093
PRO 5600.0091
PRO 5610.0076
GLN 5620.0071
LEU 5630.0064
ARG 5640.0060
LEU 5650.0050
PHE 5660.0049
GLN 5670.0061
TYR 5680.0062
ASN 5690.0067
TYR 5700.0072
PRO 5710.0077
TYR 5720.0084
TRP 5730.0083
SER 5740.0077
ILE 5750.0081
ILE 5760.0087
LEU 5770.0079
GLY 5780.0074
TYR 5790.0079
CYS 5800.0082
ILE 5810.0069
GLY 5820.0068
THR 5830.0079
SER 5840.0077
SER 5850.0066
PHE 5860.0077
ILE 5870.0093
CYS 5880.0087
ILE 5890.0082
PRO 5900.0103
THR 5910.0113
TYR 5920.0106
ILE 5930.0108
ALA 5940.0137
TYR 5950.0140
ARG 5960.0136
LEU 5970.0155
ILE 5980.0185
ILE 5990.0179
THR 6000.0172
PRO 6010.0195
GLY 6020.0196
THR 6030.0196
PHE 6040.0182
LYS 6050.0163
GLU 6060.0154
ARG 6070.0149
ILE 6080.0123
ILE 6090.0105
LYS 6100.0113
SER 6110.0106
ILE 6120.0077
THR 6130.0075
PRO 6140.0068
GLU 6150.0085
THR 6160.0094
PRO 6170.0105
GLN 200.0208
VAL 210.0186
GLN 220.0204
LEU 230.0177
GLN 240.0194
GLN 250.0189
SER 260.0218
GLY 270.0222
PRO 280.0202
GLU 290.0226
LEU 300.0235
VAL 310.0234
LYS 320.0275
LEU 330.0282
GLY 340.0293
ALA 350.0294
SER 360.0277
VAL 370.0248
ARG 380.0240
ILE 390.0203
SER 400.0210
CYS 410.0181
LYS 420.0205
ALA 430.0189
SER 440.0209
GLY 450.0208
TYR 460.0165
ARG 470.0141
PHE 480.0145
SER 490.0129
TYR 500.0094
SER 510.0076
TRP 520.0077
MET 530.0091
ASN 540.0069
TRP 550.0089
VAL 560.0058
LYS 570.0077
GLN 580.0049
ARG 590.0067
PRO 600.0035
GLY 610.0043
LYS 620.0075
GLY 630.0076
LEU 640.0053
GLU 650.0080
TRP 660.0083
ILE 670.0117
GLY 680.0118
ARG 690.0105
ILE 700.0126
TYR 710.0118
PRO 720.0142
GLY 730.0166
ASP 740.0174
GLY 750.0148
ASP 760.0151
THR 770.0157
LYS 780.0146
TYR 790.0159
SER 800.0157
GLY 810.0201
LYS 820.0194
PHE 830.0193
LYS 840.0223
GLY 850.0257
LYS 860.0235
ALA 870.0206
THR 880.0217
LEU 890.0191
THR 900.0211
ALA 910.0199
ASP 920.0219
LYS 930.0198
SER 940.0246
SER 950.0258
SER 960.0212
THR 970.0207
VAL 980.0187
TYR 990.0203
MET 1000.0190
GLN 1010.0229
LEU 1020.0223
SER 1030.0259
SER 1040.0274
LEU 1050.0244
THR 1060.0230
SER 1070.0198
GLU 1080.0167
ASP 1090.0167
SER 1100.0154
ALA 1110.0109
VAL 1120.0090
TYR 1130.0099
PHE 1140.0086
CYS 1150.0103
ALA 1160.0077
ARG 1170.0083
SER 1180.0050
ALA 1190.0052
TYR 1200.0062
GLY 1210.0036
SER 1220.0034
GLU 1230.0036
GLY 1240.0017
PHE 1250.0041
ALA 1260.0054
MET 1270.0095
ASP 1280.0114
TYR 1290.0119
TRP 1300.0107
GLY 1310.0129
GLN 1320.0142
GLY 1330.0120
THR 1340.0151
SER 1350.0136
VAL 1360.0167
THR 1370.0175
ASP 210.0195
ILE 220.0196
VAL 230.0196
LEU 240.0188
THR 250.0214
GLN 260.0215
SER 270.0264
PRO 280.0266
ALA 290.0247
SER 300.0249
LEU 310.0284
ALA 320.0312
VAL 330.0323
SER 340.0371
LEU 350.0382
GLY 360.0395
GLN 370.0381
ARG 380.0352
ALA 390.0303
THR 400.0282
ILE 410.0240
SER 420.0238
CYS 430.0210
ARG 440.0229
ALA 450.0222
SER 460.0265
GLU 470.0243
SER 480.0197
VAL 490.0159
ASP 500.0115
ASN 510.0086
TYR 520.0052
GLY 530.0090
ILE 540.0086
SER 550.0108
PHE 560.0089
LEU 570.0111
ASN 580.0096
TRP 590.0118
PHE 600.0103
GLN 610.0127
GLN 620.0100
LYS 630.0127
PRO 640.0098
GLY 650.0089
GLN 660.0108
PRO 670.0086
PRO 680.0071
LYS 690.0105
LEU 700.0108
LEU 710.0146
ILE 720.0148
TYR 730.0107
ALA 740.0112
ALA 750.0152
SER 760.0180
ASN 770.0176
GLN 780.0199
GLY 790.0171
SER 800.0186
GLY 810.0232
VAL 820.0227
PRO 830.0275
ALA 840.0291
ARG 850.0292
PHE 860.0247
SER 870.0242
GLY 880.0220
SER 890.0236
GLY 900.0239
SER 910.0224
GLY 920.0222
THR 930.0239
TYR 940.0252
PHE 950.0228
SER 960.0251
LEU 970.0245
ASN 980.0285
ILE 990.0290
HIS 1000.0344
PRO 1010.0349
MET 1020.0325
GLU 1030.0315
GLU 1040.0308
ASP 1050.0268
ASP 1060.0237
THR 1070.0221
ALA 1080.0170
VAL 1090.0142
TYR 1100.0141
PHE 1110.0115
CYS 1120.0123
GLN 1130.0094
GLN 1140.0103
THR 1150.0073
LYS 1160.0105
GLY 1170.0127
VAL 1180.0135
SER 1190.0136
TRP 1200.0096
THR 1210.0109
PHE 1220.0105
GLY 1230.0144
GLY 1240.0158
GLY 1250.0148
THR 1260.0186
LYS 1270.0189
VAL 1280.0233
GLU 1290.0257
ILE 1300.0310

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.