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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA distance fluctuations for 240110225123556539

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ASP 117 0.62 MET 0 -0.32 ARG 105
GLU 119 0.40 GLN 1 -0.36 ARG 105
ASN 85 0.35 ILE 2 -0.53 ARG 105
VAL 11 0.32 PRO 3 -0.62 ARG 105
VAL 11 0.24 LEU 4 -0.40 GLU 136
ASN 85 0.23 CYS 5 -0.32 ARG 105
VAL 11 0.34 ALA 6 -0.49 ARG 105
VAL 11 0.31 ASN 7 -0.22 LEU 104
HIS 100 0.22 LEU 8 -0.12 LEU 104
PRO 10 0.37 VAL 9 -0.16 THR 107
VAL 9 0.37 PRO 10 -0.27 ASP 117
ALA 6 0.34 VAL 11 -0.30 ASP 117
PRO 3 0.28 PRO 12 -0.28 ASP 117
ARG 105 0.27 ILE 13 -0.23 SER 40
ARG 105 0.29 THR 14 -0.21 SER 40
ARG 105 0.25 ASN 15 -0.22 SER 40
ARG 105 0.28 ALA 16 -0.18 SER 40
ARG 105 0.27 THR 17 -0.18 SER 40
ARG 105 0.20 LEU 18 -0.23 SER 40
THR 107 0.21 ASP 19 -0.19 SER 40
LYS 177 0.25 ARG 20 -0.15 PRO 3
LYS 177 0.24 ILE 21 -0.18 SER 40
LYS 177 0.27 THR 22 -0.19 SER 40
LYS 177 0.38 GLY 23 -0.16 PRO 3
LYS 177 0.41 LYS 24 -0.19 PRO 3
LYS 177 0.32 TRP 25 -0.19 PRO 3
LYS 177 0.31 PHE 26 -0.21 PRO 3
LYS 177 0.23 TYR 27 -0.18 GLY 93
LYS 177 0.25 ILE 28 -0.21 GLY 93
LYS 177 0.20 ALA 29 -0.28 GLY 93
MET 0 0.17 SER 30 -0.30 GLY 93
MET 0 0.22 ALA 31 -0.28 GLY 93
MET 0 0.31 PHE 32 -0.23 GLY 93
MET 0 0.35 ARG 33 -0.19 ASN 85
GLN 69 0.39 ASN 34 -0.27 VAL 98
GLN 69 0.36 GLU 35 -0.44 GLY 93
GLN 69 0.51 GLU 36 -0.63 ARG 95
GLN 69 0.48 TYR 37 -0.48 GLY 93
GLN 69 0.30 ASN 38 -0.58 GLY 93
GLN 69 0.30 LYS 39 -0.88 GLY 93
GLN 69 0.51 SER 40 -1.01 GLY 93
ILE 44 0.36 VAL 41 -0.70 GLY 93
ASP 159 0.28 GLN 42 -0.69 GLY 93
SER 40 0.33 GLU 43 -0.66 GLY 93
VAL 41 0.36 ILE 44 -0.41 GLY 93
VAL 41 0.31 GLN 45 -0.25 GLY 93
TYR 37 0.25 ALA 46 -0.18 LYS 135
SER 114 0.25 THR 47 -0.12 LYS 135
LYS 177 0.24 PHE 48 -0.14 PRO 3
LYS 177 0.19 PHE 49 -0.15 SER 40
LYS 177 0.21 TYR 50 -0.17 SER 40
LYS 177 0.17 PHE 51 -0.24 SER 40
LYS 177 0.11 THR 52 -0.25 SER 40
ARG 105 0.12 PRO 53 -0.29 SER 40
ARG 105 0.14 ASN 54 -0.30 SER 40
ARG 105 0.18 LYS 55 -0.27 SER 40
ARG 105 0.17 THR 56 -0.29 SER 40
ARG 105 0.15 GLU 57 -0.33 SER 40
ARG 105 0.16 ASP 58 -0.34 SER 40
MET 0 0.17 THR 59 -0.38 SER 40
MET 0 0.15 ILE 60 -0.36 SER 40
MET 0 0.15 PHE 61 -0.34 SER 40
MET 0 0.17 LEU 62 -0.33 SER 40
SER 114 0.17 ARG 63 -0.23 SER 40
SER 114 0.27 GLU 64 -0.20 GLU 43
SER 114 0.28 TYR 65 -0.15 GLU 175
SER 114 0.36 GLN 66 -0.17 GLU 175
TYR 37 0.36 THR 67 -0.16 LYS 135
TYR 37 0.48 ARG 68 -0.17 GLU 175
GLU 36 0.51 GLN 69 -0.17 GLU 175
GLU 36 0.42 ASN 70 -0.22 LYS 135
GLU 36 0.39 GLN 71 -0.19 GLU 175
TYR 37 0.34 CYS 72 -0.24 GLU 175
TYR 115 0.40 PHE 73 -0.34 GLU 175
TYR 115 0.32 TYR 74 -0.33 GLU 175
GLU 92 0.41 ASN 75 -0.38 ARG 176
GLU 92 0.22 SER 76 -0.32 ARG 176
MET 0 0.23 SER 77 -0.46 SER 40
MET 0 0.21 TYR 78 -0.45 SER 40
MET 0 0.24 LEU 79 -0.48 SER 40
MET 0 0.25 ASN 80 -0.44 SER 40
MET 0 0.22 VAL 81 -0.38 SER 40
MET 0 0.27 GLN 82 -0.35 GLU 36
ILE 2 0.23 ARG 83 -0.29 GLU 36
ILE 2 0.32 GLU 84 -0.31 TYR 115
ILE 2 0.35 ASN 85 -0.38 TYR 115
VAL 9 0.28 GLY 86 -0.29 TYR 115
MET 0 0.31 THR 87 -0.33 GLU 36
MET 0 0.28 VAL 88 -0.40 SER 40
MET 0 0.34 SER 89 -0.52 SER 40
MET 0 0.32 ARG 90 -0.62 SER 40
MET 0 0.34 TYR 91 -0.73 SER 40
ASN 75 0.41 GLU 92 -0.95 SER 40
MET 0 0.32 GLY 93 -1.01 SER 40
MET 0 0.37 GLY 94 -0.77 SER 40
MET 0 0.44 ARG 95 -0.72 SER 40
MET 0 0.44 GLU 96 -0.64 SER 40
MET 0 0.45 HIS 97 -0.59 SER 40
MET 0 0.44 VAL 98 -0.47 GLU 36
MET 0 0.36 ALA 99 -0.36 GLU 36
MET 0 0.32 HIS 100 -0.22 GLU 36
ASN 75 0.18 LEU 101 -0.21 SER 40
LYS 177 0.15 LEU 102 -0.13 SER 40
ILE 13 0.18 PHE 103 -0.19 ALA 6
ILE 13 0.22 LEU 104 -0.40 ALA 6
THR 14 0.29 ARG 105 -0.62 PRO 3
ALA 16 0.27 ASP 106 -0.52 PRO 3
LYS 177 0.28 THR 107 -0.38 PRO 3
LYS 177 0.33 LYS 108 -0.37 PRO 3
LYS 177 0.28 THR 109 -0.32 PRO 3
LYS 177 0.22 LEU 110 -0.19 PRO 3
LYS 177 0.18 MET 111 -0.14 SER 40
MET 0 0.21 PHE 112 -0.20 SER 40
MET 0 0.30 GLY 113 -0.14 LEU 101
PHE 73 0.39 SER 114 -0.28 ASN 85
MET 0 0.44 TYR 115 -0.38 ASN 85
MET 0 0.52 LEU 116 -0.24 ASN 85
MET 0 0.62 ASP 117 -0.30 ASN 85
MET 0 0.59 ASP 118 -0.28 ASN 85
MET 0 0.58 GLU 119 -0.19 ASN 85
MET 0 0.47 LYS 120 -0.23 ASN 85
MET 0 0.44 ASN 121 -0.26 ASN 85
MET 0 0.43 TRP 122 -0.22 ASN 85
MET 0 0.32 GLY 123 -0.16 ASN 85
MET 0 0.23 LEU 124 -0.12 ALA 99
MET 0 0.18 SER 125 -0.18 GLY 93
LYS 177 0.21 PHE 126 -0.16 PRO 3
LYS 177 0.25 TYR 127 -0.20 PRO 3
LYS 177 0.33 ALA 128 -0.30 PRO 3
LYS 177 0.41 ASP 129 -0.30 PRO 3
LYS 177 0.43 LYS 130 -0.32 PRO 3
LYS 177 0.39 PRO 131 -0.30 PRO 3
LYS 177 0.36 GLU 132 -0.35 THR 133
LYS 177 0.33 THR 133 -0.38 PRO 3
LYS 177 0.31 THR 134 -0.43 PRO 3
LYS 177 0.27 LYS 135 -0.41 PRO 3
LYS 177 0.28 GLU 136 -0.55 PRO 3
LYS 177 0.28 GLN 137 -0.50 PRO 3
LYS 177 0.24 LEU 138 -0.35 PRO 3
LYS 177 0.21 GLY 139 -0.39 PRO 3
LYS 177 0.20 GLU 140 -0.46 PRO 3
LYS 177 0.20 PHE 141 -0.26 PRO 3
LYS 177 0.18 TYR 142 -0.21 ASP 159
VAL 11 0.20 GLU 143 -0.22 ASP 159
LYS 177 0.16 ALA 144 -0.13 ASP 159
LYS 177 0.16 LEU 145 -0.11 GLY 93
LYS 177 0.15 ASP 146 -0.12 GLU 136
PHE 73 0.15 CYS 147 -0.15 GLU 136
MET 0 0.30 LEU 148 -0.09 GLU 136
MET 0 0.23 ARG 149 -0.09 GLU 136
MET 0 0.22 ILE 150 -0.15 GLY 93
MET 0 0.15 PRO 151 -0.22 GLY 93
LYS 177 0.17 ARG 152 -0.24 GLY 93
LYS 177 0.16 SER 153 -0.31 GLY 93
MET 0 0.17 ASP 154 -0.34 GLY 93
GLU 132 0.17 VAL 155 -0.34 GLY 93
GLU 132 0.21 MET 156 -0.42 GLY 93
GLU 132 0.28 TYR 157 -0.35 GLY 93
GLN 42 0.23 THR 158 -0.26 GLY 93
GLN 42 0.28 ASP 159 -0.33 LYS 135
LYS 177 0.33 TRP 160 -0.31 LYS 135
LYS 177 0.35 LYS 161 -0.34 LYS 135
GLU 43 0.27 LYS 162 -0.29 LYS 135
TYR 37 0.26 ASP 163 -0.24 LYS 135
TYR 37 0.30 LYS 164 -0.22 LYS 135
TYR 37 0.26 CYS 165 -0.19 LYS 130
LYS 177 0.22 GLU 166 -0.25 LYS 130
GLU 36 0.22 PRO 167 -0.23 LYS 130
TYR 115 0.21 LEU 168 -0.16 LYS 130
TYR 115 0.18 GLU 169 -0.14 PRO 3
LYS 174 0.24 LYS 170 -0.17 PRO 3
TYR 115 0.17 GLN 171 -0.12 PRO 3
TYR 115 0.15 HIS 172 -0.20 PHE 73
LYS 161 0.27 GLU 173 -0.11 ASN 75
LYS 161 0.26 LYS 174 -0.13 PHE 73
GLY 23 0.14 GLU 175 -0.34 PHE 73
GLY 23 0.24 ARG 176 -0.38 ASN 75
LYS 130 0.43 LYS 177 -0.21 ASN 75
LYS 130 0.38 GLN 178 -0.31 ASN 75

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.