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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA distance fluctuations for 240110225123556539

---  normal mode 11  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ARG 105 0.35 MET 0 -1.55 ASP 118
ARG 105 0.45 GLN 1 -1.27 ASP 117
ARG 105 0.69 ILE 2 -1.02 ASP 117
ARG 105 0.80 PRO 3 -0.77 ASP 117
GLU 140 0.45 LEU 4 -0.67 ASP 117
ARG 105 0.33 CYS 5 -0.83 ASP 117
ARG 105 0.60 ALA 6 -0.67 ASP 117
ALA 6 0.31 ASN 7 -0.33 ASP 117
PRO 10 0.25 LEU 8 -0.37 ASP 117
CYS 147 0.30 VAL 9 -0.40 TYR 115
LEU 148 0.39 PRO 10 -0.22 HIS 97
LEU 148 0.31 VAL 11 -0.20 ARG 105
ASP 117 0.33 PRO 12 -0.20 ARG 105
ASP 117 0.35 ILE 13 -0.15 SER 40
ASP 117 0.29 THR 14 -0.17 ARG 176
ASP 117 0.28 ASN 15 -0.22 ARG 176
ALA 6 0.34 ALA 16 -0.19 ARG 176
ALA 6 0.32 THR 17 -0.14 ARG 176
ASP 117 0.28 LEU 18 -0.17 ARG 176
ALA 6 0.28 ASP 19 -0.19 ARG 176
ALA 6 0.32 ARG 20 -0.14 GLU 136
ALA 6 0.25 ILE 21 -0.13 SER 40
PRO 3 0.23 THR 22 -0.19 GLY 23
PRO 3 0.24 GLY 23 -0.19 THR 22
LYS 177 0.29 LYS 24 -0.16 THR 22
PRO 3 0.28 TRP 25 -0.10 SER 153
PRO 3 0.29 PHE 26 -0.13 SER 153
PRO 3 0.26 TYR 27 -0.17 TYR 91
PRO 3 0.31 ILE 28 -0.17 TYR 91
PRO 3 0.25 ALA 29 -0.24 GLY 93
GLN 66 0.21 SER 30 -0.32 MET 0
PHE 73 0.23 ALA 31 -0.43 MET 0
ASN 75 0.29 PHE 32 -0.62 MET 0
ASN 75 0.28 ARG 33 -0.73 MET 0
ASN 75 0.36 ASN 34 -0.83 MET 0
PHE 73 0.31 GLU 35 -0.70 MET 0
PHE 73 0.41 GLU 36 -0.72 GLY 93
PHE 73 0.43 TYR 37 -0.64 MET 0
PHE 73 0.26 ASN 38 -0.59 GLY 93
SER 153 0.28 LYS 39 -0.81 GLY 93
ARG 68 0.30 SER 40 -0.92 GLY 93
ARG 68 0.29 VAL 41 -0.64 GLU 92
VAL 155 0.32 GLN 42 -0.62 GLY 93
LYS 135 0.31 GLU 43 -0.65 GLY 93
LYS 135 0.28 ILE 44 -0.46 GLU 92
LYS 135 0.33 GLN 45 -0.31 TYR 91
LYS 135 0.26 ALA 46 -0.22 TYR 91
SER 114 0.24 THR 47 -0.18 SER 77
SER 114 0.26 PHE 48 -0.12 ASN 54
TYR 115 0.28 PHE 49 -0.15 GLU 43
GLY 93 0.28 TYR 50 -0.16 THR 22
ASP 117 0.27 PHE 51 -0.19 GLU 43
ASP 117 0.28 THR 52 -0.23 PRO 53
ASP 117 0.32 PRO 53 -0.23 THR 52
ASP 117 0.33 ASN 54 -0.32 ARG 176
ASP 117 0.34 LYS 55 -0.30 ARG 176
ASP 117 0.35 THR 56 -0.38 GLN 178
ASP 117 0.38 GLU 57 -0.36 GLN 178
ASP 117 0.42 ASP 58 -0.26 GLN 178
ASP 117 0.40 THR 59 -0.25 GLU 43
ASP 117 0.36 ILE 60 -0.25 GLU 43
GLY 93 0.34 PHE 61 -0.25 GLU 43
GLU 92 0.37 LEU 62 -0.25 GLU 43
GLY 93 0.49 ARG 63 -0.22 ASN 54
GLY 93 0.39 GLU 64 -0.21 LEU 62
TYR 115 0.34 TYR 65 -0.18 ASN 54
TYR 37 0.35 GLN 66 -0.27 SER 77
TYR 37 0.28 THR 67 -0.26 SER 77
SER 40 0.30 ARG 68 -0.33 SER 77
SER 40 0.30 GLN 69 -0.32 TYR 91
LYS 135 0.24 ASN 70 -0.24 SER 77
GLU 36 0.28 GLN 71 -0.23 SER 77
TYR 37 0.34 CYS 72 -0.19 SER 77
TYR 37 0.43 PHE 73 -0.27 SER 77
GLY 93 0.63 TYR 74 -0.26 GLU 175
GLU 92 0.82 ASN 75 -0.31 SER 76
GLU 92 0.76 SER 76 -0.31 ASN 75
GLY 93 0.54 SER 77 -0.37 GLU 43
ASP 117 0.38 TYR 78 -0.34 GLU 43
ASP 117 0.43 LEU 79 -0.33 GLU 43
ASP 117 0.48 ASN 80 -0.29 SER 40
ASP 117 0.51 VAL 81 -0.23 SER 40
ASP 117 0.60 GLN 82 -0.20 SER 40
ASP 117 0.48 ARG 83 -0.17 SER 40
ASP 117 0.50 GLU 84 -0.14 ARG 105
ASP 117 0.62 ASN 85 -0.19 ILE 2
ASP 117 0.45 GLY 86 -0.18 HIS 97
ASP 117 0.59 THR 87 -0.22 MET 0
ASP 117 0.52 VAL 88 -0.27 SER 40
ASP 117 0.55 SER 89 -0.34 SER 40
ASP 117 0.42 ARG 90 -0.44 SER 40
SER 76 0.47 TYR 91 -0.62 SER 40
ASN 75 0.82 GLU 92 -0.85 SER 40
ASN 75 0.81 GLY 93 -0.92 SER 40
SER 76 0.54 GLY 94 -0.69 SER 40
ASN 75 0.49 ARG 95 -0.64 MET 0
ASP 117 0.39 GLU 96 -0.53 MET 0
ASN 75 0.43 HIS 97 -0.59 MET 0
ASP 117 0.57 VAL 98 -0.54 MET 0
ASP 117 0.42 ALA 99 -0.48 MET 0
LEU 116 0.34 HIS 100 -0.36 MET 0
LEU 116 0.28 LEU 101 -0.22 HIS 97
LEU 148 0.22 LEU 102 -0.20 HIS 97
ALA 6 0.39 PHE 103 -0.18 VAL 11
ALA 6 0.56 LEU 104 -0.16 VAL 11
PRO 3 0.80 ARG 105 -0.20 VAL 11
PRO 3 0.65 ASP 106 -0.18 GLU 136
PRO 3 0.51 THR 107 -0.18 GLU 136
PRO 3 0.47 LYS 108 -0.16 GLU 136
PRO 3 0.42 THR 109 -0.13 PRO 12
PRO 3 0.31 LEU 110 -0.14 HIS 97
PRO 3 0.17 MET 111 -0.17 HIS 97
ASN 75 0.22 PHE 112 -0.29 MET 0
ASN 75 0.29 GLY 113 -0.50 MET 0
ASN 75 0.44 SER 114 -0.78 MET 0
VAL 98 0.55 TYR 115 -1.12 MET 0
THR 87 0.47 LEU 116 -1.05 MET 0
ASN 85 0.62 ASP 117 -1.53 MET 0
ASN 85 0.49 ASP 118 -1.55 MET 0
ASN 85 0.48 GLU 119 -1.18 MET 0
ASN 85 0.36 LYS 120 -1.06 MET 0
ASN 75 0.38 ASN 121 -1.05 MET 0
ASN 75 0.35 TRP 122 -0.95 MET 0
ASN 75 0.32 GLY 123 -0.67 MET 0
ASN 75 0.25 LEU 124 -0.43 MET 0
ASN 75 0.23 SER 125 -0.31 MET 0
PRO 3 0.26 PHE 126 -0.17 GLY 93
PRO 3 0.30 TYR 127 -0.12 TYR 91
PRO 3 0.38 ALA 128 -0.14 SER 153
PRO 3 0.36 ASP 129 -0.16 SER 153
PRO 3 0.37 LYS 130 -0.21 SER 153
PRO 3 0.34 PRO 131 -0.26 SER 153
PRO 3 0.38 GLU 132 -0.35 SER 153
PRO 3 0.45 THR 133 -0.22 ARG 152
PRO 3 0.51 THR 134 -0.16 PRO 151
PRO 3 0.51 LYS 135 -0.14 ARG 149
PRO 3 0.67 GLU 136 -0.18 THR 107
PRO 3 0.61 GLN 137 -0.12 LYS 108
PRO 3 0.50 LEU 138 -0.14 ARG 149
PRO 3 0.58 GLY 139 -0.19 ASP 117
PRO 3 0.63 GLU 140 -0.21 ASP 117
PRO 3 0.40 PHE 141 -0.17 GLY 93
GLU 143 0.51 TYR 142 -0.17 GLY 93
TYR 142 0.51 GLU 143 -0.27 ASP 117
ASN 75 0.17 ALA 144 -0.28 ASP 117
PRO 10 0.19 LEU 145 -0.21 GLY 93
PRO 10 0.22 ASP 146 -0.22 ASP 117
VAL 9 0.30 CYS 147 -0.41 ASP 117
PRO 10 0.39 LEU 148 -0.45 MET 0
PRO 10 0.35 ARG 149 -0.27 MET 0
ASN 85 0.25 ILE 150 -0.34 MET 0
LYS 39 0.20 PRO 151 -0.27 GLU 132
GLU 143 0.30 ARG 152 -0.32 GLU 132
LYS 39 0.28 SER 153 -0.35 GLU 132
LYS 39 0.27 ASP 154 -0.30 MET 0
GLN 42 0.32 VAL 155 -0.30 GLY 93
GLU 143 0.29 MET 156 -0.37 GLY 93
LYS 135 0.35 TYR 157 -0.29 GLY 93
LYS 135 0.40 THR 158 -0.28 GLU 92
LYS 135 0.42 ASP 159 -0.24 SER 153
GLN 178 0.30 TRP 160 -0.23 SER 153
GLN 178 0.33 LYS 161 -0.25 SER 153
LYS 135 0.28 LYS 162 -0.18 TYR 91
PRO 3 0.25 ASP 163 -0.15 SER 77
PRO 3 0.22 LYS 164 -0.14 SER 77
GLY 93 0.28 CYS 165 -0.15 ASN 54
GLN 178 0.29 GLU 166 -0.14 ASN 54
GLY 93 0.34 PRO 167 -0.15 THR 56
GLY 93 0.46 LEU 168 -0.16 THR 56
GLY 93 0.43 GLU 169 -0.17 THR 56
GLY 93 0.38 LYS 170 -0.19 THR 56
GLY 93 0.48 GLN 171 -0.18 THR 56
GLY 93 0.50 HIS 172 -0.21 THR 56
GLY 93 0.41 GLU 173 -0.24 THR 56
GLY 93 0.39 LYS 174 -0.26 THR 56
GLY 93 0.35 GLU 175 -0.30 THR 56
GLY 93 0.36 ARG 176 -0.34 THR 56
GLY 93 0.33 LYS 177 -0.29 THR 56
LYS 130 0.35 GLN 178 -0.38 THR 56

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.