CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA distance fluctuations for 240110225123556539

---  normal mode 7  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
LYS 177 0.20 MET 0 -0.13 ASN 75
LYS 177 0.25 GLN 1 -0.11 ASN 75
LYS 177 0.30 ILE 2 -0.08 ASN 75
LYS 177 0.35 PRO 3 -0.07 ASN 85
LYS 177 0.31 LEU 4 -0.08 ASN 75
LYS 177 0.27 CYS 5 -0.10 ASN 75
LYS 177 0.32 ALA 6 -0.08 ASN 75
LYS 177 0.32 ASN 7 -0.08 ASN 75
LYS 177 0.24 LEU 8 -0.12 ASN 75
LYS 177 0.23 VAL 9 -0.11 ASN 75
LYS 177 0.20 PRO 10 -0.10 ASN 75
LYS 177 0.23 VAL 11 -0.09 ARG 105
LYS 177 0.19 PRO 12 -0.09 ARG 105
LYS 177 0.21 ILE 13 -0.07 ARG 105
LYS 177 0.26 THR 14 -0.07 THR 107
LYS 177 0.30 ASN 15 -0.07 ASP 129
LYS 177 0.40 ALA 16 -0.08 ASP 129
LYS 177 0.36 THR 17 -0.08 ASP 129
LYS 177 0.31 LEU 18 -0.08 ASP 129
LYS 177 0.45 ASP 19 -0.11 ASP 129
LYS 177 0.50 ARG 20 -0.12 ASP 129
LYS 177 0.41 ILE 21 -0.10 ASP 129
LYS 177 0.45 THR 22 -0.09 ASP 129
LYS 177 0.53 GLY 23 -0.10 LYS 24
LYS 177 0.48 LYS 24 -0.10 GLY 23
LYS 177 0.41 TRP 25 -0.08 TRP 160
LYS 177 0.34 PHE 26 -0.06 TRP 160
LYS 177 0.25 TYR 27 -0.08 TYR 74
LYS 177 0.29 ILE 28 -0.07 TYR 74
LYS 177 0.24 ALA 29 -0.11 TYR 74
LYS 177 0.17 SER 30 -0.17 TYR 74
LYS 177 0.13 ALA 31 -0.19 TYR 74
LYS 177 0.07 PHE 32 -0.23 ASN 75
ASP 159 0.06 ARG 33 -0.23 ASN 75
ASN 85 0.06 ASN 34 -0.27 ASN 75
ASP 159 0.07 GLU 35 -0.26 TYR 74
ARG 95 0.12 GLU 36 -0.32 TYR 74
GLY 93 0.13 TYR 37 -0.33 TYR 74
GLY 93 0.16 ASN 38 -0.24 TYR 74
GLY 93 0.26 LYS 39 -0.23 TYR 74
GLY 93 0.38 SER 40 -0.29 TYR 74
GLY 93 0.30 VAL 41 -0.25 TYR 74
GLY 93 0.30 GLN 42 -0.17 ASP 154
GLY 93 0.41 GLU 43 -0.17 GLU 175
GLY 93 0.32 ILE 44 -0.14 LEU 168
GLY 93 0.25 GLN 45 -0.11 LEU 168
GLY 93 0.18 ALA 46 -0.08 LEU 168
LYS 177 0.14 THR 47 -0.10 TYR 65
LYS 177 0.22 PHE 48 -0.05 TYR 37
LYS 177 0.19 PHE 49 -0.08 TYR 37
LYS 177 0.23 TYR 50 -0.07 GLU 166
LYS 177 0.22 PHE 51 -0.06 LYS 24
LYS 177 0.17 THR 52 -0.08 LYS 24
LYS 177 0.14 PRO 53 -0.06 LYS 24
GLU 43 0.08 ASN 54 -0.06 GLY 23
LYS 177 0.13 LYS 55 -0.06 ASP 129
GLU 43 0.08 THR 56 -0.06 ASP 129
GLU 43 0.10 GLU 57 -0.11 ARG 176
GLU 43 0.10 ASP 58 -0.07 ARG 176
GLU 43 0.12 THR 59 -0.13 ARG 176
GLU 43 0.10 ILE 60 -0.08 ARG 176
ARG 68 0.09 PHE 61 -0.17 ARG 176
ARG 68 0.09 LEU 62 -0.15 ARG 176
THR 22 0.07 ARG 63 -0.17 GLU 92
SER 77 0.09 GLU 64 -0.19 TYR 37
SER 77 0.07 TYR 65 -0.20 TYR 37
SER 77 0.14 GLN 66 -0.21 TYR 37
GLY 93 0.18 THR 67 -0.18 LEU 168
GLY 93 0.29 ARG 68 -0.21 GLU 175
GLY 93 0.30 GLN 69 -0.24 GLU 175
GLY 93 0.21 ASN 70 -0.21 GLU 175
GLY 94 0.14 GLN 71 -0.29 LEU 168
ASN 75 0.11 CYS 72 -0.28 LEU 168
SER 77 0.14 PHE 73 -0.34 GLU 175
CYS 165 0.12 TYR 74 -0.33 TYR 37
SER 76 0.15 ASN 75 -0.42 GLU 92
ASN 75 0.15 SER 76 -0.37 ARG 176
ARG 68 0.16 SER 77 -0.41 ARG 176
GLU 43 0.15 TYR 78 -0.32 ARG 176
GLU 43 0.16 LEU 79 -0.22 ARG 176
GLU 43 0.15 ASN 80 -0.18 ARG 176
GLU 43 0.12 VAL 81 -0.08 GLU 175
SER 40 0.12 GLN 82 -0.08 GLU 175
LYS 177 0.10 ARG 83 -0.06 ARG 105
LYS 177 0.10 GLU 84 -0.06 ARG 105
SER 40 0.10 ASN 85 -0.09 ASN 75
LYS 177 0.15 GLY 86 -0.09 ASN 75
SER 40 0.11 THR 87 -0.12 ASN 75
GLU 43 0.13 VAL 88 -0.13 ASN 75
GLU 43 0.18 SER 89 -0.19 GLU 175
GLU 43 0.21 ARG 90 -0.28 ARG 176
GLU 43 0.28 TYR 91 -0.37 ARG 176
GLU 43 0.36 GLU 92 -0.42 ASN 75
GLU 43 0.41 GLY 93 -0.47 GLU 175
GLU 43 0.33 GLY 94 -0.46 GLU 175
SER 40 0.28 ARG 95 -0.37 GLU 175
SER 40 0.23 GLU 96 -0.31 GLU 175
SER 40 0.23 HIS 97 -0.26 GLU 175
SER 40 0.18 VAL 98 -0.22 ASN 75
SER 40 0.13 ALA 99 -0.22 ASN 75
LYS 177 0.12 HIS 100 -0.16 ASN 75
LYS 177 0.20 LEU 101 -0.12 ASN 75
LYS 177 0.27 LEU 102 -0.10 ASN 75
LYS 177 0.37 PHE 103 -0.07 VAL 11
LYS 177 0.42 LEU 104 -0.08 VAL 11
LYS 177 0.49 ARG 105 -0.09 VAL 11
LYS 177 0.56 ASP 106 -0.07 PRO 12
LYS 177 0.59 THR 107 -0.07 THR 14
LYS 177 0.63 LYS 108 -0.08 ARG 20
LYS 177 0.49 THR 109 -0.06 ASP 159
LYS 177 0.38 LEU 110 -0.07 ASN 75
LYS 177 0.28 MET 111 -0.12 ASN 75
LYS 177 0.17 PHE 112 -0.18 ASN 75
LYS 177 0.13 GLY 113 -0.21 ASN 75
ASN 85 0.08 SER 114 -0.28 ASN 75
ASN 85 0.09 TYR 115 -0.27 ASN 75
LYS 177 0.08 LEU 116 -0.22 ASN 75
PRO 10 0.08 ASP 117 -0.22 ASN 75
VAL 11 0.06 ASP 118 -0.23 ASN 75
LYS 177 0.06 GLU 119 -0.21 ASN 75
VAL 11 0.04 LYS 120 -0.23 ASN 75
ASN 85 0.06 ASN 121 -0.26 ASN 75
LYS 177 0.06 TRP 122 -0.24 ASN 75
LYS 177 0.10 GLY 123 -0.23 ASN 75
LYS 177 0.16 LEU 124 -0.20 ASN 75
LYS 177 0.18 SER 125 -0.18 ASN 75
LYS 177 0.28 PHE 126 -0.12 ASN 75
LYS 177 0.34 TYR 127 -0.07 ASN 75
LYS 177 0.47 ALA 128 -0.08 ARG 20
LYS 177 0.60 ASP 129 -0.12 ARG 20
LYS 177 0.58 LYS 130 -0.09 ASP 159
LYS 177 0.42 PRO 131 -0.10 ASP 159
LYS 177 0.46 GLU 132 -0.15 ASP 159
LYS 177 0.50 THR 133 -0.11 ASP 159
LYS 177 0.53 THR 134 -0.09 ASP 159
LYS 177 0.47 LYS 135 -0.08 GLU 43
LYS 177 0.51 GLU 136 -0.06 GLU 43
LYS 177 0.49 GLN 137 -0.07 THR 158
LYS 177 0.41 LEU 138 -0.07 GLU 43
LYS 177 0.40 GLY 139 -0.07 GLU 43
LYS 177 0.40 GLU 140 -0.06 VAL 11
LYS 177 0.34 PHE 141 -0.08 ASN 75
LYS 177 0.31 TYR 142 -0.09 ASN 75
LYS 177 0.32 GLU 143 -0.09 ASN 75
LYS 177 0.28 ALA 144 -0.11 ASN 75
LYS 177 0.23 LEU 145 -0.13 ASN 75
LYS 177 0.24 ASP 146 -0.12 ASN 75
LYS 177 0.23 CYS 147 -0.13 ASN 75
LYS 177 0.17 LEU 148 -0.16 ASN 75
LYS 177 0.17 ARG 149 -0.15 ASN 75
LYS 177 0.16 ILE 150 -0.15 ASN 75
LYS 177 0.18 PRO 151 -0.13 ASN 75
LYS 177 0.23 ARG 152 -0.11 GLU 43
LYS 177 0.19 SER 153 -0.14 GLU 43
LYS 177 0.14 ASP 154 -0.17 GLN 42
LYS 177 0.18 VAL 155 -0.15 GLU 43
GLY 93 0.16 MET 156 -0.15 GLU 43
LYS 177 0.20 TYR 157 -0.12 ILE 44
LYS 177 0.20 THR 158 -0.10 THR 133
LYS 177 0.20 ASP 159 -0.15 GLU 132
LYS 177 0.23 TRP 160 -0.09 GLY 23
LYS 177 0.19 LYS 161 -0.07 GLY 23
GLY 93 0.17 LYS 162 -0.07 LEU 168
GLY 93 0.13 ASP 163 -0.09 LEU 168
TYR 74 0.09 LYS 164 -0.16 LEU 168
TYR 74 0.12 CYS 165 -0.16 LEU 168
LYS 130 0.17 GLU 166 -0.08 GLU 36
LYS 130 0.16 PRO 167 -0.16 GLN 71
LYS 130 0.16 LEU 168 -0.29 GLN 71
LYS 130 0.26 GLU 169 -0.14 GLU 36
LYS 130 0.38 LYS 170 -0.15 GLY 93
LYS 130 0.29 GLN 171 -0.28 GLN 71
LYS 130 0.31 HIS 172 -0.31 GLY 93
LYS 130 0.51 GLU 173 -0.23 GLY 93
LYS 130 0.47 LYS 174 -0.30 GLY 93
LYS 108 0.34 GLU 175 -0.47 GLY 93
LYS 108 0.41 ARG 176 -0.44 GLY 93
LYS 108 0.63 LYS 177 -0.31 GLY 94
LYS 108 0.51 GLN 178 -0.44 GLY 94

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.