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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA distance fluctuations for 240110225123556539

---  normal mode 9  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
VAL 11 0.25 MET 0 -0.26 ASP 117
ALA 16 0.25 GLN 1 -0.14 ASP 117
ALA 16 0.28 ILE 2 -0.13 ASP 117
ALA 16 0.26 PRO 3 -0.10 ASP 117
ALA 16 0.20 LEU 4 -0.14 ASP 159
ALA 16 0.21 CYS 5 -0.13 ASP 117
ALA 16 0.29 ALA 6 -0.11 ASP 117
LYS 177 0.23 ASN 7 -0.11 LEU 8
ARG 176 0.22 LEU 8 -0.11 ARG 95
ARG 176 0.26 VAL 9 -0.16 ARG 95
GLN 178 0.29 PRO 10 -0.21 ARG 105
GLN 178 0.32 VAL 11 -0.26 ARG 105
GLN 178 0.36 PRO 12 -0.23 ARG 105
GLN 178 0.40 ILE 13 -0.19 THR 107
GLN 178 0.41 THR 14 -0.15 THR 107
GLN 178 0.45 ASN 15 -0.12 LYS 108
GLN 178 0.37 ALA 16 -0.15 LYS 108
LYS 177 0.35 THR 17 -0.17 LYS 108
LYS 177 0.43 LEU 18 -0.12 ASN 80
LYS 177 0.42 ASP 19 -0.14 ASP 129
LYS 177 0.35 ARG 20 -0.18 LYS 108
LYS 177 0.34 ILE 21 -0.13 ASP 129
LYS 177 0.42 THR 22 -0.11 ASP 129
GLY 93 0.36 GLY 23 -0.09 SER 40
GLY 93 0.48 LYS 24 -0.09 SER 40
GLY 93 0.51 TRP 25 -0.08 SER 40
GLY 93 0.62 PHE 26 -0.11 GLU 166
GLY 93 0.64 TYR 27 -0.12 GLU 166
GLY 93 0.56 ILE 28 -0.18 GLU 166
GLY 93 0.47 ALA 29 -0.17 ASP 163
GLY 93 0.38 SER 30 -0.13 ASP 163
GLY 93 0.24 ALA 31 -0.14 GLN 45
GLY 93 0.12 PHE 32 -0.13 MET 0
PRO 151 0.08 ARG 33 -0.14 MET 0
ARG 152 0.09 ASN 34 -0.14 SER 77
SER 153 0.12 GLU 35 -0.18 SER 77
ARG 95 0.13 GLU 36 -0.23 SER 77
ARG 95 0.19 TYR 37 -0.22 SER 77
GLY 93 0.22 ASN 38 -0.18 SER 77
GLY 93 0.27 LYS 39 -0.20 SER 77
GLY 93 0.47 SER 40 -0.23 SER 77
GLY 93 0.57 VAL 41 -0.18 SER 77
GLY 93 0.58 GLN 42 -0.19 ASP 154
GLY 93 0.84 GLU 43 -0.20 ASP 154
GLY 93 0.96 ILE 44 -0.21 MET 156
GLY 93 0.95 GLN 45 -0.30 TYR 157
GLY 93 0.93 ALA 46 -0.24 TYR 157
GLY 93 0.91 THR 47 -0.13 MET 156
GLY 93 0.77 PHE 48 -0.10 SER 40
GLY 93 0.65 PHE 49 -0.14 SER 40
GLY 93 0.50 TYR 50 -0.11 SER 40
ARG 176 0.43 PHE 51 -0.13 SER 40
ARG 176 0.59 THR 52 -0.12 SER 40
ARG 176 0.58 PRO 53 -0.11 ASN 80
GLN 178 0.67 ASN 54 -0.12 ASN 80
GLN 178 0.61 LYS 55 -0.13 GLU 96
GLN 178 0.67 THR 56 -0.16 GLU 96
GLN 178 0.67 GLU 57 -0.19 GLU 96
GLN 178 0.58 ASP 58 -0.19 GLU 96
GLN 178 0.58 THR 59 -0.16 ASN 80
ARG 176 0.55 ILE 60 -0.13 TYR 37
ARG 176 0.61 PHE 61 -0.16 SER 40
GLU 175 0.48 LEU 62 -0.19 SER 40
GLY 93 0.62 ARG 63 -0.15 SER 40
GLU 92 0.85 GLU 64 -0.19 SER 40
GLY 93 1.03 TYR 65 -0.15 SER 40
GLY 93 1.23 GLN 66 -0.15 SER 40
GLY 93 1.26 THR 67 -0.21 LEU 168
GLY 93 1.33 ARG 68 -0.20 GLN 171
GLY 93 1.22 GLN 69 -0.22 GLN 171
GLY 93 1.14 ASN 70 -0.26 GLN 171
GLY 93 1.30 GLN 71 -0.31 GLN 171
GLY 93 1.32 CYS 72 -0.26 LEU 168
GLY 93 1.51 PHE 73 -0.17 LEU 168
GLY 93 1.14 TYR 74 -0.16 SER 40
TYR 91 1.01 ASN 75 -0.19 SER 40
TYR 91 0.66 SER 76 -0.22 SER 40
GLU 175 0.57 SER 77 -0.23 SER 40
GLU 175 0.61 TYR 78 -0.19 GLU 36
GLU 175 0.51 LEU 79 -0.15 GLU 36
GLU 175 0.49 ASN 80 -0.16 THR 59
GLN 178 0.47 VAL 81 -0.21 GLU 96
GLN 178 0.44 GLN 82 -0.26 ARG 95
GLN 178 0.44 ARG 83 -0.23 ARG 95
GLN 178 0.40 GLU 84 -0.26 ARG 95
GLN 178 0.36 ASN 85 -0.28 ARG 95
GLN 178 0.36 GLY 86 -0.19 ARG 95
GLN 178 0.36 THR 87 -0.19 ARG 95
GLU 175 0.39 VAL 88 -0.13 GLU 96
GLU 175 0.41 SER 89 -0.11 VAL 81
ASN 75 0.61 ARG 90 -0.12 GLU 36
ASN 75 1.01 TYR 91 -0.17 GLU 57
PHE 73 1.13 GLU 92 -0.11 GLU 57
PHE 73 1.51 GLY 93 -0.18 ASP 118
PHE 73 1.29 GLY 94 -0.20 ASP 118
PHE 73 0.96 ARG 95 -0.28 ASN 85
ASN 75 0.70 GLU 96 -0.25 GLN 82
PHE 73 0.50 HIS 97 -0.23 VAL 98
GLU 175 0.35 VAL 98 -0.23 HIS 97
GLU 175 0.29 ALA 99 -0.11 HIS 97
ARG 176 0.29 HIS 100 -0.14 ARG 95
ARG 176 0.30 LEU 101 -0.11 PHE 103
ARG 176 0.26 LEU 102 -0.14 PHE 103
LYS 177 0.23 PHE 103 -0.22 VAL 11
LYS 177 0.19 LEU 104 -0.22 VAL 11
PRO 3 0.18 ARG 105 -0.26 VAL 11
GLY 93 0.24 ASP 106 -0.21 VAL 11
GLY 93 0.24 THR 107 -0.22 PRO 12
GLY 93 0.32 LYS 108 -0.18 PRO 12
GLY 93 0.32 THR 109 -0.14 PRO 12
GLY 93 0.28 LEU 110 -0.12 PRO 12
GLU 92 0.27 MET 111 -0.06 VAL 11
GLU 92 0.25 PHE 112 -0.07 TYR 37
ARG 176 0.20 GLY 113 -0.07 MET 0
GLU 175 0.19 SER 114 -0.11 MET 0
GLU 175 0.20 TYR 115 -0.18 ARG 95
GLN 178 0.21 LEU 116 -0.18 ARG 95
ASN 85 0.25 ASP 117 -0.26 MET 0
ASN 85 0.19 ASP 118 -0.23 MET 0
ASN 85 0.17 GLU 119 -0.23 MET 0
ASN 85 0.13 LYS 120 -0.18 MET 0
ASN 85 0.11 ASN 121 -0.17 MET 0
LYS 177 0.13 TRP 122 -0.17 MET 0
GLU 92 0.11 GLY 123 -0.13 MET 0
GLU 92 0.21 LEU 124 -0.10 MET 0
GLU 92 0.35 SER 125 -0.07 SER 77
GLY 93 0.39 PHE 126 -0.09 GLU 166
GLY 93 0.44 TYR 127 -0.08 GLU 166
GLY 93 0.44 ALA 128 -0.12 ARG 20
GLY 93 0.45 ASP 129 -0.17 ARG 20
GLY 93 0.52 LYS 130 -0.17 LYS 170
GLY 93 0.61 PRO 131 -0.20 LYS 170
GLY 93 0.54 GLU 132 -0.21 LYS 170
GLY 93 0.44 THR 133 -0.20 GLU 132
GLY 93 0.38 THR 134 -0.16 LYS 170
GLY 93 0.34 LYS 135 -0.17 LYS 161
GLY 93 0.29 GLU 136 -0.15 VAL 11
GLY 93 0.31 GLN 137 -0.15 VAL 11
GLY 93 0.32 LEU 138 -0.19 TRP 160
GLY 93 0.25 GLY 139 -0.19 ASP 159
GLY 93 0.22 GLU 140 -0.14 ASP 159
GLY 93 0.25 PHE 141 -0.17 ASP 159
GLY 93 0.22 TYR 142 -0.22 ASP 159
GLY 93 0.15 GLU 143 -0.19 ASP 159
GLU 92 0.14 ALA 144 -0.15 ASP 159
GLU 92 0.14 LEU 145 -0.18 ASP 159
ALA 16 0.11 ASP 146 -0.19 ASP 159
ALA 16 0.14 CYS 147 -0.16 MET 0
PRO 10 0.12 LEU 148 -0.19 MET 0
ALA 16 0.11 ARG 149 -0.17 ASP 159
GLU 92 0.09 ILE 150 -0.19 ASP 159
GLY 93 0.15 PRO 151 -0.22 ASP 159
GLY 93 0.23 ARG 152 -0.26 ASP 159
GLY 93 0.23 SER 153 -0.28 LYS 162
GLY 93 0.22 ASP 154 -0.25 GLN 45
GLY 93 0.32 VAL 155 -0.25 GLN 45
GLY 93 0.44 MET 156 -0.28 GLN 45
GLY 93 0.53 TYR 157 -0.30 GLN 45
GLY 93 0.71 THR 158 -0.24 TYR 157
GLY 93 0.75 ASP 159 -0.28 SER 153
GLY 93 0.78 TRP 160 -0.23 SER 153
GLY 93 0.79 LYS 161 -0.26 LYS 174
GLY 93 0.90 LYS 162 -0.28 SER 153
GLY 93 0.96 ASP 163 -0.26 TYR 157
GLY 93 1.05 LYS 164 -0.31 GLN 171
GLY 93 1.02 CYS 165 -0.25 GLN 171
GLY 93 0.85 GLU 166 -0.26 LYS 170
GLY 93 0.83 PRO 167 -0.33 GLN 171
GLY 93 0.84 LEU 168 -0.27 GLN 71
GLY 93 0.77 GLU 169 -0.16 TYR 157
GLY 93 0.70 LYS 170 -0.26 GLU 166
GLY 94 0.70 GLN 171 -0.33 PRO 167
GLY 94 0.68 HIS 172 -0.20 GLN 71
GLY 93 0.59 GLU 173 -0.17 GLN 71
GLY 94 0.59 LYS 174 -0.32 PRO 167
GLY 94 0.63 GLU 175 -0.20 PRO 167
ASN 54 0.65 ARG 176 -0.18 GLN 71
ASN 54 0.63 LYS 177 -0.17 PRO 167
GLU 57 0.67 GLN 178 -0.28 PRO 167

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.