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***  TRANSPORT PROTEIN 21-OCT-10 3APU  ***

CA distance fluctuations for 240110225702578652

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ALA 16 0.19 GLN 1 -0.17 ASP 146
ALA 16 0.16 ILE 2 -0.15 LEU 4
ALA 16 0.10 PRO 3 -0.11 GLN 1
LEU 104 0.08 LEU 4 -0.17 GLN 1
LYS 120 0.08 CYS 5 -0.14 GLU 96
LYS 120 0.10 ALA 6 -0.09 GLU 96
LYS 120 0.13 ASN 7 -0.08 VAL 98
LYS 120 0.12 LEU 8 -0.12 VAL 98
LYS 120 0.13 VAL 9 -0.10 LYS 164
GLU 36 0.17 PRO 10 -0.11 PRO 167
GLU 36 0.19 VAL 11 -0.07 PRO 167
GLU 36 0.22 PRO 12 -0.07 PRO 167
GLU 36 0.24 ILE 13 -0.07 GLU 175
GLU 36 0.24 THR 14 -0.07 LYS 174
GLU 36 0.24 ASN 15 -0.09 LYS 174
GLU 36 0.23 ALA 16 -0.08 ASP 129
GLU 36 0.23 THR 17 -0.07 ASP 129
GLU 36 0.26 LEU 18 -0.08 GLY 23
GLU 36 0.25 ASP 19 -0.10 ASP 129
GLU 36 0.23 ARG 20 -0.11 ASP 129
GLU 36 0.25 ILE 21 -0.07 ASP 129
GLU 36 0.25 THR 22 -0.14 GLY 23
GLU 36 0.25 GLY 23 -0.14 THR 22
GLU 36 0.25 LYS 24 -0.08 LYS 161
GLU 36 0.26 TRP 25 -0.07 ASP 19
GLU 36 0.25 PHE 26 -0.07 THR 56
GLU 36 0.25 TYR 27 -0.11 THR 56
LYS 120 0.22 ILE 28 -0.10 THR 56
LYS 120 0.20 ALA 29 -0.14 GLU 57
LYS 120 0.19 SER 30 -0.17 GLU 57
LYS 120 0.15 ALA 31 -0.21 GLY 93
LYS 120 0.13 PHE 32 -0.29 GLY 93
LYS 120 0.08 ARG 33 -0.34 GLY 93
LYS 120 0.10 ASN 34 -0.45 GLY 93
LYS 120 0.11 GLU 35 -0.51 GLY 93
LYS 120 0.16 GLU 36 -0.71 GLY 93
LYS 120 0.20 TYR 37 -0.48 GLY 93
LYS 120 0.19 ASN 38 -0.39 GLY 93
LYS 120 0.23 LYS 39 -0.49 GLY 94
LYS 120 0.29 SER 40 -0.46 GLY 94
LYS 120 0.26 VAL 41 -0.27 GLU 57
LYS 120 0.27 GLN 42 -0.26 GLU 57
LYS 120 0.33 GLU 43 -0.29 GLU 57
LYS 120 0.31 ILE 44 -0.25 GLU 57
ASP 118 0.30 GLN 45 -0.23 GLU 57
ASP 118 0.28 ALA 46 -0.18 GLU 57
GLU 36 0.28 THR 47 -0.14 THR 56
GLU 36 0.27 PHE 48 -0.09 THR 56
GLU 36 0.29 PHE 49 -0.11 GLU 36
GLU 36 0.27 TYR 50 -0.10 PHE 51
GLU 36 0.28 PHE 51 -0.11 GLU 173
GLU 36 0.27 THR 52 -0.17 GLU 173
GLU 36 0.28 PRO 53 -0.16 GLU 173
GLN 71 0.31 ASN 54 -0.20 GLU 173
GLN 71 0.29 LYS 55 -0.16 LYS 174
GLN 71 0.37 THR 56 -0.19 LYS 174
GLN 71 0.43 GLU 57 -0.19 GLU 175
GLU 36 0.31 ASP 58 -0.16 GLU 175
GLU 36 0.33 THR 59 -0.17 GLU 175
GLU 36 0.31 ILE 60 -0.16 GLU 173
GLU 36 0.30 PHE 61 -0.19 GLU 173
GLU 36 0.31 LEU 62 -0.15 GLU 36
GLU 36 0.29 ARG 63 -0.18 GLU 36
GLU 36 0.30 GLU 64 -0.20 GLU 36
GLU 36 0.27 TYR 65 -0.18 GLU 36
GLY 94 0.30 GLN 66 -0.20 SER 40
ASP 118 0.30 THR 67 -0.27 GLU 57
ASP 118 0.34 ARG 68 -0.32 GLU 57
ASP 118 0.38 GLN 69 -0.38 GLU 57
ASP 118 0.34 ASN 70 -0.38 GLU 57
ASP 118 0.32 GLN 71 -0.43 GLU 57
GLU 96 0.30 CYS 72 -0.32 GLU 57
ASP 118 0.28 PHE 73 -0.30 SER 40
GLU 36 0.26 TYR 74 -0.27 GLU 36
GLU 36 0.29 ASN 75 -0.32 GLU 36
GLU 36 0.28 SER 76 -0.27 GLU 36
GLU 36 0.34 SER 77 -0.23 GLU 36
GLU 36 0.33 TYR 78 -0.20 LEU 79
GLU 36 0.36 LEU 79 -0.20 TYR 78
GLU 36 0.34 ASN 80 -0.21 LEU 168
GLU 36 0.31 VAL 81 -0.16 PRO 167
GLU 36 0.29 GLN 82 -0.17 PRO 167
GLU 36 0.27 ARG 83 -0.11 PRO 167
GLU 36 0.24 GLU 84 -0.12 PRO 167
GLU 36 0.24 ASN 85 -0.15 PRO 167
GLU 36 0.24 GLY 86 -0.12 PRO 167
GLU 36 0.27 THR 87 -0.15 PRO 167
GLU 36 0.31 VAL 88 -0.16 PRO 167
GLU 36 0.35 SER 89 -0.20 ASP 117
GLU 36 0.41 ARG 90 -0.25 TYR 115
GLU 36 0.46 TYR 91 -0.28 ASN 121
GLU 36 0.53 GLU 92 -0.39 GLU 36
GLU 36 0.65 GLY 93 -0.50 GLU 36
GLU 36 0.57 GLY 94 -0.38 GLU 36
GLU 36 0.54 ARG 95 -0.33 ASP 118
GLU 36 0.44 GLU 96 -0.32 ASP 118
GLU 36 0.37 HIS 97 -0.33 TYR 115
GLU 36 0.32 VAL 98 -0.26 ASP 117
GLU 36 0.26 ALA 99 -0.19 TYR 74
GLU 36 0.22 HIS 100 -0.14 PRO 167
GLU 36 0.23 LEU 101 -0.10 PRO 167
GLU 36 0.19 LEU 102 -0.07 PRO 167
GLU 36 0.18 PHE 103 -0.06 VAL 11
GLU 36 0.15 LEU 104 -0.06 VAL 11
GLN 1 0.18 ARG 105 -0.07 VAL 11
GLU 36 0.16 ASP 106 -0.07 VAL 11
GLU 36 0.19 THR 107 -0.07 PRO 12
GLU 36 0.20 LYS 108 -0.06 PRO 12
GLU 36 0.20 THR 109 -0.04 PRO 12
GLU 36 0.21 LEU 110 -0.04 THR 56
GLU 36 0.20 MET 111 -0.08 GLU 57
GLU 36 0.22 PHE 112 -0.12 ASN 75
GLU 36 0.17 GLY 113 -0.16 TYR 74
LYS 120 0.16 SER 114 -0.24 TYR 91
LYS 120 0.12 TYR 115 -0.33 HIS 97
LYS 120 0.11 LEU 116 -0.24 GLU 96
VAL 9 0.11 ASP 117 -0.31 GLU 96
VAL 9 0.09 ASP 118 -0.34 GLN 69
VAL 9 0.08 GLU 119 -0.30 GLY 94
VAL 9 0.07 LYS 120 -0.37 GLY 94
PRO 10 0.08 ASN 121 -0.37 GLY 93
LYS 120 0.09 TRP 122 -0.29 GLY 93
LYS 120 0.13 GLY 123 -0.23 GLY 93
LYS 120 0.16 LEU 124 -0.16 ASN 75
LYS 120 0.19 SER 125 -0.15 ASN 75
LYS 120 0.19 PHE 126 -0.10 GLU 57
GLU 36 0.23 TYR 127 -0.07 THR 56
GLU 36 0.22 ALA 128 -0.06 ARG 20
GLU 36 0.23 ASP 129 -0.11 ARG 20
GLU 36 0.22 LYS 130 -0.08 ARG 20
ASP 118 0.23 PRO 131 -0.08 ASP 159
ASP 118 0.20 GLU 132 -0.09 ASP 159
LYS 120 0.19 THR 133 -0.04 THR 158
LYS 174 0.18 THR 134 -0.05 THR 158
LYS 174 0.15 LYS 135 -0.06 GLU 43
LYS 174 0.15 GLU 136 -0.05 VAL 155
LYS 120 0.16 GLN 137 -0.04 VAL 11
LYS 120 0.15 LEU 138 -0.06 THR 56
LYS 120 0.13 GLY 139 -0.07 GLY 93
LYS 120 0.14 GLU 140 -0.06 GLY 93
LYS 120 0.15 PHE 141 -0.08 GLY 93
LYS 120 0.12 TYR 142 -0.11 GLY 93
LYS 120 0.11 GLU 143 -0.12 GLN 1
LYS 120 0.11 ALA 144 -0.13 GLY 93
LYS 120 0.11 LEU 145 -0.16 GLY 93
LYS 120 0.08 ASP 146 -0.17 GLN 1
LYS 120 0.08 CYS 147 -0.16 GLN 1
LYS 120 0.07 LEU 148 -0.20 GLY 93
LYS 161 0.06 ARG 149 -0.20 GLY 93
LYS 120 0.08 ILE 150 -0.22 GLY 93
LYS 120 0.08 PRO 151 -0.20 GLY 93
LYS 120 0.11 ARG 152 -0.16 GLY 93
LYS 120 0.11 SER 153 -0.17 GLY 93
LYS 120 0.12 ASP 154 -0.21 GLY 93
LYS 120 0.16 VAL 155 -0.16 GLU 57
LYS 120 0.20 MET 156 -0.19 GLU 57
LYS 120 0.21 TYR 157 -0.16 GLU 57
LYS 120 0.25 THR 158 -0.16 GLU 57
ASP 118 0.26 ASP 159 -0.16 THR 56
ASP 118 0.25 TRP 160 -0.13 THR 56
ASP 118 0.26 LYS 161 -0.16 THR 56
ASP 118 0.28 LYS 162 -0.21 THR 56
ASP 118 0.27 ASP 163 -0.20 THR 56
ASP 118 0.28 LYS 164 -0.25 THR 56
ASP 118 0.26 CYS 165 -0.18 THR 56
ASP 118 0.24 GLU 166 -0.12 ASN 54
ASP 118 0.23 PRO 167 -0.14 ASN 54
ASP 118 0.22 LEU 168 -0.16 ASN 54
ASP 118 0.21 GLU 169 -0.13 GLU 36
LYS 130 0.20 LYS 170 -0.14 GLY 23
GLU 57 0.18 GLN 171 -0.17 GLY 23
LYS 130 0.17 HIS 172 -0.18 GLY 23
LYS 130 0.20 GLU 173 -0.20 ASN 54
GLU 57 0.20 LYS 174 -0.21 GLY 23
GLU 57 0.22 GLU 175 -0.26 GLY 23
HIS 97 0.10 ILE 2 -0.11 ARG 105
GLN 69 0.13 PRO 3 -0.10 LEU 104
GLN 69 0.14 LEU 4 -0.08 LEU 104
GLN 69 0.16 CYS 5 -0.06 ALA 16
HIS 97 0.12 ALA 6 -0.09 ALA 16
HIS 97 0.11 ASN 7 -0.11 LYS 120
HIS 97 0.15 LEU 8 -0.10 LYS 120
HIS 97 0.12 VAL 9 -0.11 LYS 120
LYS 164 0.10 PRO 10 -0.15 GLU 36
ARG 105 0.08 VAL 11 -0.18 GLU 36
ARG 105 0.07 PRO 12 -0.21 GLU 36
ASP 129 0.05 ILE 13 -0.23 GLU 36
ASP 129 0.05 THR 14 -0.23 GLU 36
LYS 24 0.06 ASN 15 -0.24 GLU 36
ASP 129 0.07 ALA 16 -0.22 GLU 36
ASP 129 0.07 THR 17 -0.23 GLU 36
LYS 24 0.07 LEU 18 -0.26 GLU 36
LYS 24 0.08 ASP 19 -0.24 GLU 36
ASP 129 0.09 ARG 20 -0.23 GLU 36
ASP 129 0.07 ILE 21 -0.25 GLU 36
LYS 24 0.08 THR 22 -0.26 GLU 36
LYS 24 0.15 GLY 23 -0.26 GLU 175
GLY 23 0.15 LYS 24 -0.26 GLU 36
PHE 26 0.06 TRP 25 -0.26 GLU 36
THR 56 0.07 PHE 26 -0.25 GLU 36
THR 56 0.11 TYR 27 -0.24 GLU 36
THR 56 0.11 ILE 28 -0.20 LYS 120
GLU 57 0.14 ALA 29 -0.19 LYS 120
GLU 57 0.17 SER 30 -0.17 LYS 120
GLY 93 0.24 ALA 31 -0.13 LYS 120
GLY 93 0.30 PHE 32 -0.11 LYS 120
GLY 93 0.34 ARG 33 -0.07 PRO 10
GLY 93 0.41 ASN 34 -0.10 ASN 85
GLY 93 0.46 GLU 35 -0.09 ASN 85
GLY 93 0.65 GLU 36 -0.12 LYS 120
GLY 93 0.50 TYR 37 -0.17 LYS 120
GLY 93 0.39 ASN 38 -0.16 LYS 120
GLY 94 0.53 LYS 39 -0.19 LYS 120
GLY 94 0.46 SER 40 -0.26 LYS 120
GLU 57 0.27 VAL 41 -0.25 LYS 120
GLU 57 0.25 GLN 42 -0.24 LYS 120
GLU 57 0.29 GLU 43 -0.29 LYS 120
GLU 57 0.26 ILE 44 -0.29 LYS 120
GLU 57 0.23 GLN 45 -0.27 LYS 120
GLU 57 0.18 ALA 46 -0.26 GLU 36
THR 56 0.15 THR 47 -0.29 GLU 36
THR 56 0.10 PHE 48 -0.28 GLU 36
GLU 36 0.07 PHE 49 -0.30 GLU 36
THR 52 0.09 TYR 50 -0.29 GLU 36
PRO 53 0.07 PHE 51 -0.29 GLU 36
TYR 50 0.09 THR 52 -0.28 GLU 36
PHE 51 0.07 PRO 53 -0.29 GLU 36
GLU 173 0.10 ASN 54 -0.31 GLN 71
GLU 173 0.08 LYS 55 -0.28 GLN 71
GLU 175 0.17 THR 56 -0.37 GLN 71
GLU 175 0.22 GLU 57 -0.43 GLN 71
GLN 171 0.14 ASP 58 -0.31 GLU 36
GLN 171 0.13 THR 59 -0.33 GLU 36
ASP 117 0.08 ILE 60 -0.32 GLU 36
TYR 115 0.10 PHE 61 -0.32 GLU 36
SER 114 0.13 LEU 62 -0.33 GLU 36
GLU 36 0.14 ARG 63 -0.31 GLU 36
TYR 37 0.16 GLU 64 -0.33 GLU 36
GLU 36 0.14 TYR 65 -0.30 GLU 36
GLU 57 0.21 GLN 66 -0.32 GLU 36
GLU 57 0.26 THR 67 -0.29 GLU 36
GLU 57 0.34 ARG 68 -0.31 LYS 120
GLU 57 0.38 GLN 69 -0.34 ASP 118
GLU 57 0.37 ASN 70 -0.31 ASP 118
GLU 57 0.43 GLN 71 -0.32 ARG 95
GLU 57 0.31 CYS 72 -0.29 ARG 95
GLU 57 0.27 PHE 73 -0.33 ARG 95
GLU 36 0.24 TYR 74 -0.30 GLU 36
GLU 36 0.26 ASN 75 -0.34 GLU 36
GLU 36 0.21 SER 76 -0.33 GLU 36
SER 114 0.20 SER 77 -0.37 GLU 36
TYR 115 0.17 TYR 78 -0.36 GLU 36
SER 114 0.18 LEU 79 -0.37 GLU 36
LEU 168 0.21 ASN 80 -0.35 GLU 36
LEU 168 0.15 VAL 81 -0.30 GLU 36
PRO 167 0.17 GLN 82 -0.28 GLU 36
PRO 167 0.10 ARG 83 -0.25 GLU 36
PRO 167 0.12 GLU 84 -0.23 GLU 36
PRO 167 0.14 ASN 85 -0.22 GLU 36
PRO 167 0.10 GLY 86 -0.23 GLU 36
PRO 167 0.15 THR 87 -0.25 GLU 36
LEU 79 0.16 VAL 88 -0.30 GLU 36
ASP 117 0.20 SER 89 -0.35 GLU 36
SER 114 0.28 ARG 90 -0.41 GLU 36
TYR 115 0.31 TYR 91 -0.49 GLU 36
GLU 36 0.37 GLU 92 -0.53 GLU 36
GLU 36 0.46 GLY 93 -0.71 GLU 36
GLU 36 0.30 GLY 94 -0.59 GLU 36
ASP 118 0.34 ARG 95 -0.50 GLU 36
ASP 118 0.34 GLU 96 -0.42 GLU 36
TYR 115 0.38 HIS 97 -0.36 GLU 36
ASP 117 0.26 VAL 98 -0.29 GLU 36
ARG 90 0.18 ALA 99 -0.24 GLU 36
LEU 79 0.14 HIS 100 -0.20 GLU 36
LEU 79 0.10 LEU 101 -0.21 GLU 36
ARG 90 0.09 LEU 102 -0.17 GLU 36
LEU 104 0.07 PHE 103 -0.16 GLU 36
PHE 103 0.07 LEU 104 -0.13 LYS 120
VAL 11 0.08 ARG 105 -0.15 GLU 175
PRO 12 0.06 ASP 106 -0.17 GLU 175
PRO 12 0.07 THR 107 -0.20 GLU 175
GLU 132 0.06 LYS 108 -0.22 GLU 175
GLU 132 0.04 THR 109 -0.19 GLU 36
THR 56 0.05 LEU 110 -0.19 GLU 36
ARG 90 0.09 MET 111 -0.18 GLU 36
ARG 90 0.14 PHE 112 -0.20 GLU 36
ARG 90 0.18 GLY 113 -0.15 LYS 120
HIS 97 0.34 SER 114 -0.13 LYS 120
HIS 97 0.38 TYR 115 -0.12 ASN 85
HIS 97 0.30 LEU 116 -0.13 PRO 10
GLN 69 0.34 ASP 117 -0.13 PRO 10
GLN 69 0.38 ASP 118 -0.11 PRO 10
GLN 69 0.34 GLU 119 -0.09 PRO 10
GLN 69 0.36 LYS 120 -0.08 PRO 10
GLY 93 0.36 ASN 121 -0.09 PRO 10
GLY 93 0.30 TRP 122 -0.10 PRO 10
GLY 93 0.24 GLY 123 -0.11 LYS 120
TYR 91 0.18 LEU 124 -0.14 LYS 120
SER 77 0.15 SER 125 -0.17 LYS 120
GLU 57 0.11 PHE 126 -0.18 LYS 120
THR 56 0.07 TYR 127 -0.21 GLU 36
ARG 20 0.05 ALA 128 -0.21 GLU 36
ARG 20 0.09 ASP 129 -0.23 GLU 36
ARG 20 0.08 LYS 130 -0.23 GLU 173
ARG 20 0.06 PRO 131 -0.21 GLU 36
LYS 108 0.06 GLU 132 -0.19 LYS 120
THR 158 0.05 THR 133 -0.17 LYS 120
TYR 157 0.07 THR 134 -0.19 GLU 173
TYR 157 0.07 LYS 135 -0.16 GLU 173
TYR 157 0.05 GLU 136 -0.16 GLU 173
TYR 157 0.05 GLN 137 -0.15 GLU 173
GLY 93 0.07 LEU 138 -0.14 LYS 120
GLY 93 0.08 GLY 139 -0.12 GLU 173
GLY 93 0.08 GLU 140 -0.12 LYS 120
GLY 93 0.10 PHE 141 -0.13 LYS 120
GLY 93 0.13 TYR 142 -0.10 LYS 120
GLY 93 0.12 GLU 143 -0.09 LYS 120
GLY 93 0.14 ALA 144 -0.09 LYS 120
GLY 93 0.17 LEU 145 -0.08 LYS 120
GLY 93 0.17 ASP 146 -0.06 LYS 120
GLN 69 0.19 CYS 147 -0.05 LYS 120
GLN 69 0.22 LEU 148 -0.05 LYS 120
GLN 69 0.22 ARG 149 -0.05 TRP 160
GLY 93 0.23 ILE 150 -0.06 TRP 160
GLY 93 0.21 PRO 151 -0.06 TRP 160
GLY 93 0.18 ARG 152 -0.08 LYS 120
GLY 93 0.19 SER 153 -0.08 LYS 120
GLY 93 0.24 ASP 154 -0.09 LYS 120
GLY 93 0.19 VAL 155 -0.13 LYS 120
GLU 57 0.19 MET 156 -0.18 LYS 120
GLU 57 0.15 TYR 157 -0.20 LYS 120
GLU 57 0.16 THR 158 -0.23 LYS 120
THR 56 0.15 ASP 159 -0.23 LYS 120
THR 56 0.12 TRP 160 -0.23 LYS 120
THR 56 0.14 LYS 161 -0.24 LYS 120
THR 56 0.20 LYS 162 -0.26 LYS 120
THR 56 0.18 ASP 163 -0.26 ASP 118
THR 56 0.23 LYS 164 -0.27 ASP 118
THR 56 0.17 CYS 165 -0.25 GLU 36
THR 56 0.09 GLU 166 -0.23 GLU 36
ASP 19 0.09 PRO 167 -0.22 ASP 118
GLU 36 0.13 LEU 168 -0.22 GLU 36
GLU 36 0.11 GLU 169 -0.23 GLU 36
ASP 19 0.11 LYS 170 -0.20 LYS 130
ASP 19 0.14 GLN 171 -0.19 GLU 175
ASP 19 0.14 HIS 172 -0.23 GLU 175
ASP 19 0.13 GLU 173 -0.23 LYS 130

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.